BLASTX nr result

ID: Papaver22_contig00015187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00015187
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524459.1| PREDICTED: uncharacterized protein LOC547883...   106   2e-21
dbj|BAJ34310.1| unnamed protein product [Thellungiella halophila]     102   3e-20
ref|NP_001240069.1| uncharacterized protein LOC100793680 [Glycin...   101   7e-20
gb|AAF81337.1|AC007767_17 Contains similarity to GMFP4 from Glyc...   100   9e-20
ref|NP_564399.1| tobamovirus multiplication 2A protein [Arabidop...   100   9e-20

>ref|XP_003524459.1| PREDICTED: uncharacterized protein LOC547883 [Glycine max]
          Length = 277

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/92 (60%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = -1

Query: 273 MGCRGCXXXXXXXXXXXXXXXXLGMVGYGIYLFVEWRRIIDNTPT-GSSQEFVQLGRPML 97
           M CRGC                L MVGYGIYLFVE+ +  DNT T G  Q  VQLGRPML
Sbjct: 1   MACRGCWECLLKLLNFILTLAGLAMVGYGIYLFVEYNKTPDNTLTVGDDQTLVQLGRPML 60

Query: 96  LVVSLSGSILDKLPKAWFIYLFIGVGAILFVI 1
           + VSLS S LD LPKAWFIYLFIG+GA+LFVI
Sbjct: 61  VAVSLSNSFLDDLPKAWFIYLFIGIGAVLFVI 92


>dbj|BAJ34310.1| unnamed protein product [Thellungiella halophila]
          Length = 280

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/95 (52%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
 Frame = -1

Query: 273 MGCRGCXXXXXXXXXXXXXXXXLGMVGYGIYLFVEWRRIIDNT----PTGSSQEFVQLGR 106
           M CRGC                LGM+GYGIYLFVE++R  DN+    P    Q +V LGR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRATDNSVTFNPVNGDQSYVSLGR 60

Query: 105 PMLLVVSLSGSILDKLPKAWFIYLFIGVGAILFVI 1
           PML+ V+LS ++ D LPKAWFIYLFIG+G  LFVI
Sbjct: 61  PMLMAVALSSNVFDNLPKAWFIYLFIGIGVALFVI 95


>ref|NP_001240069.1| uncharacterized protein LOC100793680 [Glycine max]
           gi|255641974|gb|ACU21254.1| unknown [Glycine max]
          Length = 277

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/92 (58%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = -1

Query: 273 MGCRGCXXXXXXXXXXXXXXXXLGMVGYGIYLFVEWRRIIDNTPTGSSQEF-VQLGRPML 97
           M CRGC                L MVGYGIYLFVE+ +  DNT   S  +  VQ GRPML
Sbjct: 1   MACRGCWECLLKLLNFILTLAGLAMVGYGIYLFVEYNKAWDNTLNFSEDKTEVQFGRPML 60

Query: 96  LVVSLSGSILDKLPKAWFIYLFIGVGAILFVI 1
           +VVSLS S LD+LPKAWFIYLFIG+GA+LFVI
Sbjct: 61  VVVSLSNSFLDELPKAWFIYLFIGIGAVLFVI 92


>gb|AAF81337.1|AC007767_17 Contains similarity to GMFP4 from Glycine max gb|U64915. ESTs
           gb|AV442477, gb|AV441037, gb|AV534954, gb|AV560678 and
           gb|AV518757 come from this gene [Arabidopsis thaliana]
          Length = 252

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/95 (52%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
 Frame = -1

Query: 273 MGCRGCXXXXXXXXXXXXXXXXLGMVGYGIYLFVEWRRIIDNTPT----GSSQEFVQLGR 106
           M CRGC                LGM+GYGIYLFVE++R+ DN+ T       Q +V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 105 PMLLVVSLSGSILDKLPKAWFIYLFIGVGAILFVI 1
           P+L+ VSLS +I D LPKAWFIYLFIG+G  LFVI
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVI 95


>ref|NP_564399.1| tobamovirus multiplication 2A protein [Arabidopsis thaliana]
           gi|42571723|ref|NP_973952.1| tobamovirus multiplication
           2A protein [Arabidopsis thaliana]
           gi|79319067|ref|NP_001031127.1| tobamovirus
           multiplication 2A protein [Arabidopsis thaliana]
           gi|12248019|gb|AAG50101.1|AF334723_1 unknown protein
           [Arabidopsis thaliana]
           gi|14326469|gb|AAK60280.1|AF385687_1 At1g32400/F5D14_22
           [Arabidopsis thaliana] gi|21595337|gb|AAM66092.1|
           unknown [Arabidopsis thaliana]
           gi|25006245|dbj|BAC24019.1| tobamovirus multiplication
           2A [Arabidopsis thaliana] gi|332193355|gb|AEE31476.1|
           tobamovirus multiplication 2A protein [Arabidopsis
           thaliana] gi|332193356|gb|AEE31477.1| tobamovirus
           multiplication 2A protein [Arabidopsis thaliana]
           gi|332193357|gb|AEE31478.1| tobamovirus multiplication
           2A protein [Arabidopsis thaliana]
          Length = 280

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/95 (52%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
 Frame = -1

Query: 273 MGCRGCXXXXXXXXXXXXXXXXLGMVGYGIYLFVEWRRIIDNTPT----GSSQEFVQLGR 106
           M CRGC                LGM+GYGIYLFVE++R+ DN+ T       Q +V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 105 PMLLVVSLSGSILDKLPKAWFIYLFIGVGAILFVI 1
           P+L+ VSLS +I D LPKAWFIYLFIG+G  LFVI
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVI 95


Top