BLASTX nr result

ID: Papaver22_contig00014490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00014490
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   113   2e-27
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  102   5e-25
ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853...   109   2e-22
emb|CBI40659.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra...   103   6e-22

>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score =  113 bits (283), Expect(2) = 2e-27
 Identities = 63/85 (74%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = -3

Query: 512 RHLPISGPEGLVELNKIAVRFEEKIFTAATSQSDYLRKISLKMLTMETKSQTNGVANSLP 333
           RHLP SG EGL EL KIAVRFEEKI+TAATSQSDYLRKISLKMLTME+KSQ N V NS+P
Sbjct: 44  RHLPFSGQEGLEELKKIAVRFEEKIYTAATSQSDYLRKISLKMLTMESKSQ-NNVPNSVP 102

Query: 332 LNTGGGSQNPQDP-ASHSMQSQVRN 261
            N  G +  P DP AS SMQ QV N
Sbjct: 103 PNPFGNNNRPPDPGASQSMQPQVHN 127



 Score = 33.9 bits (76), Expect(2) = 2e-27
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
 Frame = -2

Query: 162 QNNIANSGIQGPVALSSTLP--SG----AXXXXXXXXXXXXXXSGMTQNSSGNLVGQG 7
           QNN+A++GIQ    L+S LP  SG    +              SG+ QNS+GN +GQG
Sbjct: 153 QNNMASTGIQSSAGLTSALPPVSGLAQTSIPNVVGQNSNMQNISGVPQNSAGNSLGQG 210


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  102 bits (255), Expect(2) = 5e-25
 Identities = 57/84 (67%), Positives = 64/84 (76%)
 Frame = -3

Query: 512 RHLPISGPEGLVELNKIAVRFEEKIFTAATSQSDYLRKISLKMLTMETKSQTNGVANSLP 333
           RHLP SG +GL EL KIA RFEEKI+TAA+SQSDYLRKISLKML+ME+KSQ N + NSL 
Sbjct: 59  RHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDYLRKISLKMLSMESKSQ-NAMPNSLQ 117

Query: 332 LNTGGGSQNPQDPASHSMQSQVRN 261
            N  G S  P DP   SMQ+QV N
Sbjct: 118 SNNPGSSNRPPDPG--SMQNQVHN 139



 Score = 36.6 bits (83), Expect(2) = 5e-25
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -2

Query: 162 QNNIANSGIQGPVALSSTLPS------GAXXXXXXXXXXXXXXSGMTQNSSGNLVGQG 7
           QNN++++G+QG   LSS LPS                      SG++QNS GN +GQG
Sbjct: 165 QNNMSSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQNMSGISQNSGGNSMGQG 222


>ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853144 [Vitis vinifera]
          Length = 170

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/75 (74%), Positives = 64/75 (85%)
 Frame = -3

Query: 512 RHLPISGPEGLVELNKIAVRFEEKIFTAATSQSDYLRKISLKMLTMETKSQTNGVANSLP 333
           RHLP+SG EGL EL KIAVRFEEKI+TAATSQSDYLRKISLKMLTMETKSQT  + ++LP
Sbjct: 28  RHLPVSGQEGLHELRKIAVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQT-AMPSNLP 86

Query: 332 LNTGGGSQNPQDPAS 288
            N+ G S+NP DP +
Sbjct: 87  SNSAGNSKNPPDPGT 101


>emb|CBI40659.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/73 (76%), Positives = 63/73 (86%)
 Frame = -3

Query: 512 RHLPISGPEGLVELNKIAVRFEEKIFTAATSQSDYLRKISLKMLTMETKSQTNGVANSLP 333
           RHLP+SG EGL EL KIAVRFEEKI+TAATSQSDYLRKISLKMLTMETKSQT  + ++LP
Sbjct: 28  RHLPVSGQEGLHELRKIAVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQT-AMPSNLP 86

Query: 332 LNTGGGSQNPQDP 294
            N+ G S+NP DP
Sbjct: 87  SNSAGNSKNPPDP 99


>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like, partial [Cucumis sativus]
          Length = 589

 Score =  103 bits (257), Expect(2) = 6e-22
 Identities = 58/84 (69%), Positives = 62/84 (73%)
 Frame = -3

Query: 512 RHLPISGPEGLVELNKIAVRFEEKIFTAATSQSDYLRKISLKMLTMETKSQTNGVANSLP 333
           RHLP+SG EGL EL KIAVRFEEKIFTAATSQSDYLRKISLKMLTMETK+Q   + N LP
Sbjct: 43  RHLPVSGQEGLSELRKIAVRFEEKIFTAATSQSDYLRKISLKMLTMETKTQP-PMGNPLP 101

Query: 332 LNTGGGSQNPQDPASHSMQSQVRN 261
            N       P D +S SMQ  V N
Sbjct: 102 SNPMVPGNKPLDASSQSMQPPVIN 125



 Score = 25.4 bits (54), Expect(2) = 6e-22
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
 Frame = -2

Query: 162 QNNIANSGI-QGPVALSSTLP------SGAXXXXXXXXXXXXXXSGMTQNSSGNLVGQG 7
           Q NI N+ + Q   +LSS +P      S +              SG+ QNS GN +GQG
Sbjct: 147 QQNIPNNIVPQSSSSLSSAVPPVAGLASSSMSNMVGQNPNIQNVSGVPQNSGGNAMGQG 205


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