BLASTX nr result

ID: Papaver22_contig00014195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00014195
         (2548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro...   114   2e-22
ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro...   113   3e-22
ref|XP_002523404.1| rubisco subunit binding-protein beta subunit...   105   6e-20
ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|1...   104   1e-19
ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chl...   103   2e-19

>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297746501|emb|CBI16557.3| unnamed protein product
           [Vitis vinifera]
          Length = 608

 Score =  114 bits (284), Expect = 2e-22
 Identities = 82/162 (50%), Positives = 96/162 (59%), Gaps = 10/162 (6%)
 Frame = -3

Query: 572 TTMSSVGSLAALCSCATDKMLSFSS-------KLSTMPFGGRRQNVVLQKRCSPKIRGSQ 414
           TTMSSVGSLAA      DK L+ SS        +S+  FG RRQNVVL++  SP+I    
Sbjct: 6   TTMSSVGSLAAPGGRGMDKKLATSSDRLSSFASISSSSFG-RRQNVVLRRTRSPRINAMA 64

Query: 413 EPVY*--DGSASKKLEXXXXXXXXXXXXXXXXXXXXXXXTLGSKG*DCSFRKQYGSPKIA 240
           + +Y   DGSA KKL+                       TLG KG +     +YGSPKI 
Sbjct: 65  KDLYFNKDGSAIKKLQTGVNKLADLVGV-----------TLGPKGRNVVLESKYGSPKIV 113

Query: 239 N-GVTVAKEVELENPVENTGAKLV*QAAAKTSDLAWNGTPTS 117
           N GVTVAKEVELE+PVEN GAKLV QAAAKT+DLA +GT TS
Sbjct: 114 NDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTS 155


>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297743227|emb|CBI36094.3| unnamed protein product
           [Vitis vinifera]
          Length = 609

 Score =  113 bits (282), Expect = 3e-22
 Identities = 75/161 (46%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
 Frame = -3

Query: 569 TMSSVGSLAALCSCATDKMLSFSSK-------LSTMPFGGRRQNVVLQKRCSPKIRGSQE 411
           TMSS+G   +  S   DK    SS+       +S   F GR+Q++VLQKRCSPK+R   +
Sbjct: 7   TMSSIGYFTSSSSHTMDKKFLGSSRRLSSFASISANSFEGRKQSMVLQKRCSPKVRAMAK 66

Query: 410 PVY*--DGSASKKLEXXXXXXXXXXXXXXXXXXXXXXXTLGSKG*DCSFRKQYGSPKIAN 237
            +Y   DGSA KKL+                       TLG KG +     +YGSPKI N
Sbjct: 67  ELYFNKDGSAIKKLQTGVNKLADLVGV-----------TLGPKGRNVVLESKYGSPKIVN 115

Query: 236 -GVTVAKEVELENPVENTGAKLV*QAAAKTSDLAWNGTPTS 117
            GVTVA+EVELE+PVEN GA+LV QAA+KT+DLA +GT TS
Sbjct: 116 DGVTVAREVELEDPVENIGARLVRQAASKTNDLAGDGTTTS 156


>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223537354|gb|EEF38983.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 605

 Score =  105 bits (262), Expect = 6e-20
 Identities = 78/159 (49%), Positives = 92/159 (57%), Gaps = 7/159 (4%)
 Frame = -3

Query: 572 TTMSSVGSLAA----LCSCATDKMLSFSSKLSTMPFGGRRQNVVLQKRCSPKIRGSQEPV 405
           T MSSVGSL A        +T   LS  + +S   FG RRQNVVL++  SPKI    + +
Sbjct: 6   TAMSSVGSLVAPNVDKKFASTSNRLSSFASISGSAFG-RRQNVVLRRSRSPKICAMAKDL 64

Query: 404 Y*--DGSASKKLEXXXXXXXXXXXXXXXXXXXXXXXTLGSKG*DCSFRKQYGSPKIAN-G 234
           +   DGSA KKL+                       TLG KG +     +YGSPKI N G
Sbjct: 65  HFNKDGSAIKKLQTGVNKLADLVGV-----------TLGPKGRNVVLESKYGSPKIVNDG 113

Query: 233 VTVAKEVELENPVENTGAKLV*QAAAKTSDLAWNGTPTS 117
           VTVAKEVELE+PVEN GAKLV QAAAKT+DLA +GT TS
Sbjct: 114 VTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTS 152


>ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|118486341|gb|ABK95011.1|
           unknown [Populus trichocarpa]
           gi|222844875|gb|EEE82422.1| predicted protein [Populus
           trichocarpa]
          Length = 607

 Score =  104 bits (259), Expect = 1e-19
 Identities = 78/160 (48%), Positives = 94/160 (58%), Gaps = 8/160 (5%)
 Frame = -3

Query: 572 TTMSSVGSLAALCSCATDKMLSFSS-KLSTMPF-----GGRRQNVVLQKRCSPKIRGSQE 411
           T MSS G+LAA  + A DK  +FSS KLS+         GR QNVVL +  S K+  ++E
Sbjct: 6   TAMSSAGTLAAPNARALDKKFAFSSNKLSSFASISASRFGRPQNVVLPRSRSLKVNAAKE 65

Query: 410 PVY*-DGSASKKLEXXXXXXXXXXXXXXXXXXXXXXXTLGSKG*DCSFRKQYGSPKIAN- 237
             +  DGSA +KL+                       TLG KG +     +YGSPKI N 
Sbjct: 66  LHFNKDGSAIRKLQTGVNKLADLVGV-----------TLGPKGRNVVLESKYGSPKIVND 114

Query: 236 GVTVAKEVELENPVENTGAKLV*QAAAKTSDLAWNGTPTS 117
           GVTVAKEVELE+PVEN GAKLV QAAAKT+DLA +GT TS
Sbjct: 115 GVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTS 154


>ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 599

 Score =  103 bits (258), Expect = 2e-19
 Identities = 69/155 (44%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
 Frame = -3

Query: 575 LTTMSSVGSLAALCSCATDKMLSFSSKLSTMPFGGRRQNVVLQKRCSPKIRGSQEPVY*- 399
           L+  S+VG +A     A+DK  S  S +S++    R +NV LQ++C+ +++ ++E  +  
Sbjct: 5   LSATSTVGLMAT--GIASDKKSSSLSSVSSISLASRPRNVRLQRKCNFRVKAAKELYFNK 62

Query: 398 DGSASKKLEXXXXXXXXXXXXXXXXXXXXXXXTLGSKG*DCSFRKQYGSPKIAN-GVTVA 222
           DGSA+KKL+                       TLG KG +     +YGSPKI N GVTVA
Sbjct: 63  DGSATKKLQAGVNKLADLVGV-----------TLGPKGRNVVLESKYGSPKIVNDGVTVA 111

Query: 221 KEVELENPVENTGAKLV*QAAAKTSDLAWNGTPTS 117
           +EVELE+PVEN GAKLV QAAAKT+DLA +GT TS
Sbjct: 112 REVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTS 146


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