BLASTX nr result

ID: Papaver22_contig00014118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00014118
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-26
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   120   8e-25
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-24
ref|XP_002520572.1| pentatricopeptide repeat-containing protein,...   116   1e-23
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ...   108   3e-21

>ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|222854749|gb|EEE92296.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  125 bits (315), Expect = 2e-26
 Identities = 58/97 (59%), Positives = 78/97 (80%)
 Frame = -3

Query: 1181 YLEALKLFKTMMNMGIKPTVVTFINVFPAIAGIEDCKSSAVLYGLLLKLGTDYASDLFAV 1002
            Y+EA++LF+ +M MGIKP+ V+F+NVFPA + +ED K++  LYG+L+K+G++Y +DLF V
Sbjct: 204  YVEAIRLFRLVMKMGIKPSPVSFVNVFPAFSSVEDFKNANALYGMLVKMGSEYVNDLFVV 263

Query: 1001 SSAIFMFSELGDIDTAR*VFSFSRVRNIEIWNTMIGG 891
            SSAIFMF+ELG ID AR VF     +N EIWNTMIGG
Sbjct: 264  SSAIFMFAELGHIDFARKVFDHCLEKNTEIWNTMIGG 300


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  120 bits (301), Expect = 8e-25
 Identities = 56/96 (58%), Positives = 74/96 (77%)
 Frame = -3

Query: 1178 LEALKLFKTMMNMGIKPTVVTFINVFPAIAGIEDCKSSAVLYGLLLKLGTDYASDLFAVS 999
            +EA K+F+TMM MGI+PT V+F+NVFPA+  + D  ++ VLYGL++KLG+DY  D F VS
Sbjct: 200  IEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVS 259

Query: 998  SAIFMFSELGDIDTAR*VFSFSRVRNIEIWNTMIGG 891
            SAIFM++ELG +D AR +F     RN E+WNTMIGG
Sbjct: 260  SAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic [Vitis vinifera]
          Length = 825

 Score =  119 bits (297), Expect = 2e-24
 Identities = 55/96 (57%), Positives = 74/96 (77%)
 Frame = -3

Query: 1178 LEALKLFKTMMNMGIKPTVVTFINVFPAIAGIEDCKSSAVLYGLLLKLGTDYASDLFAVS 999
            +EA K+F+TMM MGI+PT V+F+NVFPA+  + D  ++ VLYGL++KLG+D+  D F VS
Sbjct: 200  IEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVS 259

Query: 998  SAIFMFSELGDIDTAR*VFSFSRVRNIEIWNTMIGG 891
            SAIFM++ELG +D AR +F     RN E+WNTMIGG
Sbjct: 260  SAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295


>ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540232|gb|EEF41805.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  116 bits (291), Expect = 1e-23
 Identities = 55/97 (56%), Positives = 75/97 (77%)
 Frame = -3

Query: 1181 YLEALKLFKTMMNMGIKPTVVTFINVFPAIAGIEDCKSSAVLYGLLLKLGTDYASDLFAV 1002
            Y+EA++ F+ MM  GIKP+ V+F+NVFPAI+ + D K++ VLYG+LLKLG +YA+DLF V
Sbjct: 81   YVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVGDFKNANVLYGMLLKLGNEYANDLFVV 140

Query: 1001 SSAIFMFSELGDIDTAR*VFSFSRVRNIEIWNTMIGG 891
            SSAI M++ELG +D  R VF     ++ E+WNTMIGG
Sbjct: 141  SSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGG 177


>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329184|gb|EFH59603.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 824

 Score =  108 bits (270), Expect = 3e-21
 Identities = 53/94 (56%), Positives = 68/94 (72%)
 Frame = -3

Query: 1175 EALKLFKTMMNMGIKPTVVTFINVFPAIAGIEDCKSSAVLYGLLLKLGTDYASDLFAVSS 996
            EA + F  MM M IKP+ V+F+NVFPA+A     K + V YGL+LKLG +Y  DLF VSS
Sbjct: 201  EACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSS 260

Query: 995  AIFMFSELGDIDTAR*VFSFSRVRNIEIWNTMIG 894
            AI M++ELGD++++R VF     RNIE+WNTMIG
Sbjct: 261  AISMYAELGDLESSRRVFDSCVERNIEVWNTMIG 294


Top