BLASTX nr result

ID: Papaver22_contig00013941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00013941
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|1...   152   3e-35
ref|XP_002270173.1| PREDICTED: transcription elongation factor S...   147   8e-34
ref|XP_004145631.1| PREDICTED: transcription elongation factor S...   147   1e-33
gb|AFK41664.1| unknown [Lotus japonicus]                              146   2e-33

>ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|222850733|gb|EEE88280.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  152 bits (385), Expect = 3e-35
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = +3

Query: 3   TYDQFRDSGCENCQFFNMDKDNEMVNECTTSNFTGIISVMDPSRSWAGRWLRIGKFVPGC 182
           TYDQFR+SGCENC FF MD+D+E V +CTT NFTGIISVMDPSRSWA RWLRIG+FVPGC
Sbjct: 27  TYDQFRESGCENCSFFKMDEDHERVVDCTTPNFTGIISVMDPSRSWAARWLRIGRFVPGC 86

Query: 183 YTLTVSETLSGELQTICDEHNIPYVPPKR 269
           YTL VSE L  +LQ +C++  +PY+PPKR
Sbjct: 87  YTLAVSEALPEDLQNLCEDERVPYIPPKR 115


>ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|118489920|gb|ABK96757.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864401|gb|EEF01532.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score =  152 bits (384), Expect = 3e-35
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = +3

Query: 3   TYDQFRDSGCENCQFFNMDKDNEMVNECTTSNFTGIISVMDPSRSWAGRWLRIGKFVPGC 182
           TYDQFR+SGCENC FF MD+D+E V +CTT NFTGIISVMDPSRSWA RWLRIG+FVPGC
Sbjct: 27  TYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGIISVMDPSRSWAARWLRIGRFVPGC 86

Query: 183 YTLTVSETLSGELQTICDEHNIPYVPPKR 269
           YTL VSE L  +LQ +C++  +PY+PPKR
Sbjct: 87  YTLAVSEALPEDLQNLCEDERVPYIPPKR 115


>ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis
           vinifera] gi|297742714|emb|CBI35348.3| unnamed protein
           product [Vitis vinifera]
          Length = 114

 Score =  147 bits (372), Expect = 8e-34
 Identities = 64/89 (71%), Positives = 74/89 (83%)
 Frame = +3

Query: 3   TYDQFRDSGCENCQFFNMDKDNEMVNECTTSNFTGIISVMDPSRSWAGRWLRIGKFVPGC 182
           TYDQFR+SGCENC FF MD+D+E V +CTT NF GIIS+MDPSRSWA RWLRIG+FVPGC
Sbjct: 26  TYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISMMDPSRSWAARWLRIGRFVPGC 85

Query: 183 YTLTVSETLSGELQTICDEHNIPYVPPKR 269
           YTL VSE L  +LQ +C+E  + YVPPKR
Sbjct: 86  YTLAVSEALPEDLQNLCEEERVQYVPPKR 114


>ref|XP_004145631.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Cucumis sativus]
          Length = 116

 Score =  147 bits (371), Expect = 1e-33
 Identities = 64/89 (71%), Positives = 73/89 (82%)
 Frame = +3

Query: 3   TYDQFRDSGCENCQFFNMDKDNEMVNECTTSNFTGIISVMDPSRSWAGRWLRIGKFVPGC 182
           TYDQFR+SGCENC FF MD+D+E V ECTT NF GIISVMDP+RSWA RWLRIG+FVPGC
Sbjct: 27  TYDQFRESGCENCPFFKMDEDHERVVECTTPNFNGIISVMDPARSWAARWLRIGRFVPGC 86

Query: 183 YTLTVSETLSGELQTICDEHNIPYVPPKR 269
           YTL VSE L  +LQ +C+E  + Y PPKR
Sbjct: 87  YTLAVSEALPEDLQNLCEEERVQYAPPKR 115


>gb|AFK41664.1| unknown [Lotus japonicus]
          Length = 115

 Score =  146 bits (369), Expect = 2e-33
 Identities = 64/89 (71%), Positives = 72/89 (80%)
 Frame = +3

Query: 3   TYDQFRDSGCENCQFFNMDKDNEMVNECTTSNFTGIISVMDPSRSWAGRWLRIGKFVPGC 182
           TYDQFRDSGCENCQFF M++D+E + +CTT NF GIISVMDPSRSWA RWLRIGKF PG 
Sbjct: 27  TYDQFRDSGCENCQFFKMEEDHERIADCTTPNFNGIISVMDPSRSWAARWLRIGKFAPGV 86

Query: 183 YTLTVSETLSGELQTICDEHNIPYVPPKR 269
           YTL VSE L  E+Q IC+E  + Y PPKR
Sbjct: 87  YTLAVSEALPEEMQAICEEERVQYAPPKR 115


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