BLASTX nr result
ID: Papaver22_contig00013863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00013863
(1069 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 129 7e-44
emb|CBI25589.3| unnamed protein product [Vitis vinifera] 129 7e-44
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 129 2e-43
ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein c... 126 1e-42
ref|XP_002309312.1| predicted protein [Populus trichocarpa] gi|2... 127 6e-42
>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
[Vitis vinifera] gi|147858113|emb|CAN81413.1|
hypothetical protein VITISV_031170 [Vitis vinifera]
Length = 988
Score = 129 bits (324), Expect(2) = 7e-44
Identities = 63/89 (70%), Positives = 75/89 (84%)
Frame = -3
Query: 473 VQVADLVVSFCKTMVESSSMKCFAKTRNKKNKITMIAEPLEKGLEKDIENGVVSIDCSRK 294
V+VAD VVSFC+T+VESSSMKCFA+T NKKNKITMIAEPLEKGL +DIENGVVSID RK
Sbjct: 668 VKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWHRK 727
Query: 293 RLTNFCMSSNYSWDILSSRGVWVFGPGKQ 207
+L +F + Y WD+L++R +W FGP KQ
Sbjct: 728 KLGDF-FQTKYDWDLLAARSIWAFGPDKQ 755
Score = 75.5 bits (184), Expect(2) = 7e-44
Identities = 42/69 (60%), Positives = 47/69 (68%), Gaps = 16/69 (23%)
Frame = -2
Query: 195 GPNILLDDYIPSDADKNLLNALKNSNGQGTQWG---------PIRNVKFKI-------EP 64
GPNILLDD + S+ DKNLLNA+K+S QG QWG PIRNVKFKI EP
Sbjct: 756 GPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEP 815
Query: 63 IHRGTGQII 37
+HRGTGQII
Sbjct: 816 LHRGTGQII 824
Score = 90.9 bits (224), Expect = 5e-16
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = -2
Query: 639 VFDVLFRVYSGEIQTGQTVRVLGEGYSPDDEEDMTVKEITKLWVYQAR 496
VFD RVYSGEIQTGQT+RVLGEGYSP+DEEDMTVKE+TKLWVYQAR
Sbjct: 504 VFDAFGRVYSGEIQTGQTLRVLGEGYSPEDEEDMTVKEVTKLWVYQAR 551
>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
Length = 931
Score = 129 bits (324), Expect(2) = 7e-44
Identities = 63/89 (70%), Positives = 75/89 (84%)
Frame = -3
Query: 473 VQVADLVVSFCKTMVESSSMKCFAKTRNKKNKITMIAEPLEKGLEKDIENGVVSIDCSRK 294
V+VAD VVSFC+T+VESSSMKCFA+T NKKNKITMIAEPLEKGL +DIENGVVSID RK
Sbjct: 611 VKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWHRK 670
Query: 293 RLTNFCMSSNYSWDILSSRGVWVFGPGKQ 207
+L +F + Y WD+L++R +W FGP KQ
Sbjct: 671 KLGDF-FQTKYDWDLLAARSIWAFGPDKQ 698
Score = 75.5 bits (184), Expect(2) = 7e-44
Identities = 42/69 (60%), Positives = 47/69 (68%), Gaps = 16/69 (23%)
Frame = -2
Query: 195 GPNILLDDYIPSDADKNLLNALKNSNGQGTQWG---------PIRNVKFKI-------EP 64
GPNILLDD + S+ DKNLLNA+K+S QG QWG PIRNVKFKI EP
Sbjct: 699 GPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEP 758
Query: 63 IHRGTGQII 37
+HRGTGQII
Sbjct: 759 LHRGTGQII 767
Score = 90.9 bits (224), Expect = 5e-16
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = -2
Query: 639 VFDVLFRVYSGEIQTGQTVRVLGEGYSPDDEEDMTVKEITKLWVYQAR 496
VFD RVYSGEIQTGQT+RVLGEGYSP+DEEDMTVKE+TKLWVYQAR
Sbjct: 447 VFDAFGRVYSGEIQTGQTLRVLGEGYSPEDEEDMTVKEVTKLWVYQAR 494
>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
component-like [Cucumis sativus]
gi|449493675|ref|XP_004159406.1| PREDICTED: 116 kDa U5
small nuclear ribonucleoprotein component-like [Cucumis
sativus]
Length = 988
Score = 129 bits (324), Expect(2) = 2e-43
Identities = 62/89 (69%), Positives = 76/89 (85%)
Frame = -3
Query: 473 VQVADLVVSFCKTMVESSSMKCFAKTRNKKNKITMIAEPLEKGLEKDIENGVVSIDCSRK 294
V+VAD VVSFC+T+VESSSMKCFA+T NKKNKITMIAEPLE+GL +DIENGVVS+D SRK
Sbjct: 668 VKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSLDWSRK 727
Query: 293 RLTNFCMSSNYSWDILSSRGVWVFGPGKQ 207
+L +F + Y WD+L++R +W FGP KQ
Sbjct: 728 KLGDF-FQTKYEWDLLAARSIWAFGPDKQ 755
Score = 73.9 bits (180), Expect(2) = 2e-43
Identities = 41/69 (59%), Positives = 47/69 (68%), Gaps = 16/69 (23%)
Frame = -2
Query: 195 GPNILLDDYIPSDADKNLLNALKNSNGQGTQWG---------PIRNVKFKI-------EP 64
GPNILLDD + S+ DKNLLNA+K+S QG QWG PIRNVKFKI EP
Sbjct: 756 GPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEP 815
Query: 63 IHRGTGQII 37
+HRG+GQII
Sbjct: 816 LHRGSGQII 824
Score = 89.0 bits (219), Expect = 2e-15
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = -2
Query: 639 VFDVLFRVYSGEIQTGQTVRVLGEGYSPDDEEDMTVKEITKLWVYQAR 496
VFD RVYSG+IQTGQTVRVLGEGYSPDDEEDM VKE+TKLW+YQAR
Sbjct: 504 VFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMVVKEVTKLWLYQAR 551
>ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein component [Medicago
truncatula] gi|355510562|gb|AES91704.1| 116 kDa U5 small
nuclear ribonucleoprotein component [Medicago
truncatula]
Length = 983
Score = 126 bits (317), Expect(2) = 1e-42
Identities = 61/89 (68%), Positives = 74/89 (83%)
Frame = -3
Query: 473 VQVADLVVSFCKTMVESSSMKCFAKTRNKKNKITMIAEPLEKGLEKDIENGVVSIDCSRK 294
V+VAD VVSFC+T+VESSSMKCFA+T NKKNKITMIAEPLE+GL +DIENGVVS D +RK
Sbjct: 668 VKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSTDWNRK 727
Query: 293 RLTNFCMSSNYSWDILSSRGVWVFGPGKQ 207
+L F + Y WD+L++R +W FGP KQ
Sbjct: 728 KLGEF-FQTKYDWDLLAARSIWAFGPDKQ 755
Score = 73.9 bits (180), Expect(2) = 1e-42
Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 16/69 (23%)
Frame = -2
Query: 195 GPNILLDDYIPSDADKNLLNALKNSNGQGTQWG---------PIRNVKFKI-------EP 64
GPNILLDD +P++ DK+LLNA+K+S QG QWG PIRNVKFKI EP
Sbjct: 756 GPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEP 815
Query: 63 IHRGTGQII 37
+HRG+GQII
Sbjct: 816 LHRGSGQII 824
Score = 92.0 bits (227), Expect = 2e-16
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -2
Query: 639 VFDVLFRVYSGEIQTGQTVRVLGEGYSPDDEEDMTVKEITKLWVYQAR 496
VFD RVYSG+IQTGQTVRVLGEGYSPDDEEDMTVKE+TKLWVYQAR
Sbjct: 504 VFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMTVKEVTKLWVYQAR 551
>ref|XP_002309312.1| predicted protein [Populus trichocarpa] gi|222855288|gb|EEE92835.1|
predicted protein [Populus trichocarpa]
Length = 988
Score = 127 bits (318), Expect(2) = 6e-42
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = -3
Query: 473 VQVADLVVSFCKTMVESSSMKCFAKTRNKKNKITMIAEPLEKGLEKDIENGVVSIDCSRK 294
V+VAD VVSFC+T+VESSSMKCFA+T NKKNKITMIAEPLEKGL +DIE+GVVSID +RK
Sbjct: 669 VKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIEDGVVSIDWNRK 728
Query: 293 RLTNFCMSSNYSWDILSSRGVWVFGPGKQ 207
L +F + Y WD+L++R +W FGP KQ
Sbjct: 729 ALGDF-FKTKYDWDLLAARSIWAFGPDKQ 756
Score = 71.2 bits (173), Expect(2) = 6e-42
Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 16/69 (23%)
Frame = -2
Query: 195 GPNILLDDYIPSDADKNLLNALKNSNGQGTQWG---------PIRNVKFKI-------EP 64
GPNILLDD +P++ DK LL A+K+S QG QWG PIRNVKFKI EP
Sbjct: 757 GPNILLDDTLPTEVDKGLLGAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEP 816
Query: 63 IHRGTGQII 37
+HRG+GQII
Sbjct: 817 LHRGSGQII 825
Score = 84.3 bits (207), Expect = 5e-14
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = -2
Query: 636 FDVLFRVYSGEIQTGQTVRVLGEGYSPDDEEDMTVKEITKLWVYQAR 496
FD RVYSG+I TGQ+V+VLGEGYSP+DEEDMTVKE+TKLWVYQAR
Sbjct: 505 FDAFGRVYSGKIMTGQSVKVLGEGYSPEDEEDMTVKEVTKLWVYQAR 551