BLASTX nr result

ID: Papaver22_contig00013771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00013771
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [V...   103   2e-20
emb|CBI35445.3| unnamed protein product [Vitis vinifera]              102   7e-20
ref|NP_177458.1| bromodomain-containing protein GTE3 [Arabidopsi...    92   9e-17
gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachy...    91   1e-16
ref|XP_002322229.1| global transcription factor group [Populus t...    89   6e-16

>ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
          Length = 561

 Score =  103 bits (258), Expect = 2e-20
 Identities = 74/206 (35%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
 Frame = +3

Query: 3   PMDLGTVEDKLKKGLYKSPLEFASDVRLTFDNAILYNPIGHEVHELAKRLLKTFNESFDP 182
           PMDLGTV+ K+ K LY SPL+FA+DVRLTFDNA+LYNP GH+VH +A++LL  F + F P
Sbjct: 211 PMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFKP 270

Query: 183 ANQKFEIDLKKLEIENGGGSRSSSIVVPIGISDDERERKRFVRQRVLPSSTPDRMRTVTP 362
              K E D +  E    GG R     +      +E +   +     +P  TP+R++  +P
Sbjct: 271 VYNKLEEDERDQERIIVGGGRGGVSAIAGTSGGEELQGSSW---NHIP--TPERLKKPSP 325

Query: 363 DRIMHKP-----PPSFRRNSNQQSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYQQQA 527
             +  KP     P     +SN  S +                              +   
Sbjct: 326 KPVAKKPERMQVPIPATGSSNPPSVQSVPTPSP----------------------MRAPP 363

Query: 528 VKQMSGGIGRPLSGKQPKPKAKDAIK 605
           VK ++    RP SGKQPKPKAKD  K
Sbjct: 364 VKPLA---TRPSSGKQPKPKAKDPNK 386


>emb|CBI35445.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score =  102 bits (253), Expect = 7e-20
 Identities = 73/211 (34%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
 Frame = +3

Query: 3   PMDLGTVEDKLKKGLYKSPLEFASDVRLTFDNAILYNPIGHEVHELAKRLLKTFNESFDP 182
           PMDLGTV+ K+ K LY SPL+FA+DVRLTFDNA+LYNP GH+VH +A++LL  F + F P
Sbjct: 223 PMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFKP 282

Query: 183 ANQKFEIDLKKLEIENGGGSRSSSIVVPIGISDDERERKRFVRQRVLPSS-----TPDRM 347
              K E                          +DER+++R +   +  SS     TP+R+
Sbjct: 283 VYNKLE--------------------------EDERDQERIIVGELQGSSWNHIPTPERL 316

Query: 348 RTVTPDRIMHKP-----PPSFRRNSNQQSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 512
           +  +P  +  KP     P     +SN  S +                             
Sbjct: 317 KKPSPKPVAKKPERMQVPIPATGSSNPPSVQSVPTPSP---------------------- 354

Query: 513 YQQQAVKQMSGGIGRPLSGKQPKPKAKDAIK 605
            +   VK ++    RP SGKQPKPKAKD  K
Sbjct: 355 MRAPPVKPLA---TRPSSGKQPKPKAKDPNK 382


>ref|NP_177458.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
           gi|75194105|sp|Q9S7T1.1|GTE3_ARATH RecName:
           Full=Transcription factor GTE3, chloroplastic; AltName:
           Full=Bromodomain-containing protein GTE3; AltName:
           Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E3;
           Flags: Precursor gi|5903104|gb|AAD55662.1|AC008017_35
           Highly similar to non intermediate filament IFA binding
           protein [Arabidopsis thaliana]
           gi|12324313|gb|AAG52122.1|AC010556_4 hypothetical
           protein; 61711-63380 [Arabidopsis thaliana]
           gi|56236042|gb|AAV84477.1| At1g73150 [Arabidopsis
           thaliana] gi|332197298|gb|AEE35419.1|
           bromodomain-containing protein GTE3 [Arabidopsis
           thaliana]
          Length = 461

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 41/71 (57%), Positives = 56/71 (78%)
 Frame = +3

Query: 3   PMDLGTVEDKLKKGLYKSPLEFASDVRLTFDNAILYNPIGHEVHELAKRLLKTFNESFDP 182
           PMDLGTV+ +L K LYKSPLEFA DVRLTF+NA+LYNP+GH+V+ +A+ LL  F E + P
Sbjct: 160 PMDLGTVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVP 219

Query: 183 ANQKFEIDLKK 215
              ++E+ ++K
Sbjct: 220 LETQYELLIRK 230


>gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachysandra terminalis]
          Length = 428

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 47/83 (56%), Positives = 62/83 (74%)
 Frame = +3

Query: 3   PMDLGTVEDKLKKGLYKSPLEFASDVRLTFDNAILYNPIGHEVHELAKRLLKTFNESFDP 182
           PMDLGTV+  + K LY SPL+FASDVRLTF+NA+ YNP GH+V+ +A++LL  F E F+P
Sbjct: 77  PMDLGTVKLNIGKNLYSSPLDFASDVRLTFNNALSYNPKGHDVYAMAEQLLVRFEEMFEP 136

Query: 183 ANQKFEIDLKKLEIENGGGSRSS 251
           A +KFE D ++ +I  G   RSS
Sbjct: 137 AYKKFE-DAQQRKISAGEIRRSS 158


>ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
           gi|222869225|gb|EEF06356.1| global transcription factor
           group [Populus trichocarpa]
          Length = 709

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 56/141 (39%), Positives = 76/141 (53%)
 Frame = +3

Query: 3   PMDLGTVEDKLKKGLYKSPLEFASDVRLTFDNAILYNPIGHEVHELAKRLLKTFNESFDP 182
           PMDLGTV+ K+  G Y SPL FA+DVRLTF NA+ YNP G++VH +A+ L K F      
Sbjct: 206 PMDLGTVKSKIVSGEYSSPLGFAADVRLTFSNAMKYNPPGNDVHSMAETLRKYF------ 259

Query: 183 ANQKFEIDLKKLEIENGGGSRSSSIVVPIGISDDERERKRFVRQRVLPSSTPDRMRTVTP 362
              ++++  KKL +  G  S  S I V I     ERE    + +    S+ P + + +TP
Sbjct: 260 -EVRWKVIEKKLPVTTGVESMPSRIDVHI-----ERETTVHIERETTTSAPPLKKKKITP 313

Query: 363 DRIMHKPPPSFRRNSNQQSSK 425
                KP P  R  SN +  K
Sbjct: 314 SDNKVKPEPVRRVMSNAEKQK 334


Top