BLASTX nr result

ID: Papaver22_contig00013187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00013187
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265167.2| PREDICTED: 30S ribosomal protein S11-like [V...    58   3e-06
ref|XP_002518786.1| Mitochondrial ribosomal protein S11, putativ...    58   3e-06
dbj|BAJ22100.1| ribosomal protein S11 [Cycas taitungensis]             58   4e-06
gb|AFK42065.1| unknown [Medicago truncatula]                           57   1e-05

>ref|XP_002265167.2| PREDICTED: 30S ribosomal protein S11-like [Vitis vinifera]
           gi|296089604|emb|CBI39423.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
 Frame = +1

Query: 406 RNVKANTVVVRVKGFTNFRKKKEAVLRLREAL----GPNYQIINVQDVTNLPHNGCRLP 570
           RN+   +VV++VKGFT F+KKK+A++  +E      G    I+ ++D T  PHNGCRLP
Sbjct: 92  RNLGLKSVVMKVKGFTYFKKKKQAIMSWKEGFNSSRGDENPIMYIEDTTRRPHNGCRLP 150


>ref|XP_002518786.1| Mitochondrial ribosomal protein S11, putative [Ricinus communis]
           gi|223542167|gb|EEF43711.1| Mitochondrial ribosomal
           protein S11, putative [Ricinus communis]
          Length = 226

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
 Frame = +1

Query: 406 RNVKANTVVVRVKGFTNFRKKKEAVLRLREALGPNYQ----IINVQDVTNLPHNGCRLP 570
           R +   +VV+RVKGFT F+KK++A++  RE    +      I+ ++DVT  PHNGCRLP
Sbjct: 163 REMGLKSVVMRVKGFTYFKKKRQAIMSFREGFSNSRSDQNPIVYIEDVTQRPHNGCRLP 221


>dbj|BAJ22100.1| ribosomal protein S11 [Cycas taitungensis]
          Length = 193

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 27/55 (49%), Positives = 36/55 (65%)
 Frame = +1

Query: 406 RNVKANTVVVRVKGFTNFRKKKEAVLRLREALGPNYQIINVQDVTNLPHNGCRLP 570
           +N+   +VVV VKG T F KKK  +L  R+ +G    I+++ DVT L HNGCRLP
Sbjct: 134 KNLGMKSVVVEVKGSTYFGKKKAVILSFRKGVGRKSLIMHIHDVTQLSHNGCRLP 188


>gb|AFK42065.1| unknown [Medicago truncatula]
          Length = 237

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
 Frame = +1

Query: 406 RNVKANTVVVRVKGFTNFRKKKEAVLRLREAL----GPNYQIINVQDVTNLPHNGCRLP 570
           R +   +VV++V GFT+FR+K++A+L  RE      G    I+ ++D T  PHNGCRLP
Sbjct: 174 RGLGLKSVVMKVNGFTHFRRKRQAILSWREGFTDSRGDKNPIVYIEDTTRRPHNGCRLP 232


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