BLASTX nr result

ID: Papaver22_contig00013070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00013070
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...   150   4e-34
ref|XP_002529115.1| uv excision repair protein rad23, putative [...   144   2e-32
gb|AFK43607.1| unknown [Lotus japonicus]                              144   3e-32
ref|XP_002315945.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31
ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23...   141   2e-31

>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
           gi|297737829|emb|CBI27030.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score =  150 bits (378), Expect = 4e-34
 Identities = 104/245 (42%), Positives = 129/245 (52%), Gaps = 57/245 (23%)
 Frame = -1

Query: 821 ITMLSKASASSEPVPSRVA-------IERVKDAGGRRWDWEDAERALRAAHNDECRAVTD 663
           +T++S+  A  +   + VA       I+++ D GG  WD +   RALRAA+N+  RAV  
Sbjct: 147 VTVVSETDAYGQAASNLVAGNNFEEAIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEY 206

Query: 662 LM-GITHQREET-----------------------VPSAGPNAN------QGIPDQQPEP 573
           L  GI  Q E                          PS+GPNAN      QGIP+    P
Sbjct: 207 LYSGIPEQAEVPPVARAPASGQAANPPAQSQQPVPAPSSGPNANPLDLFPQGIPNVGSNP 266

Query: 572 VP---------SNQFQALRAMVQTNPHILQPMLQELKRQKPNLAALIDENQADLLDLICQ 420
                      S QFQALRAMVQ NP ILQPMLQEL +Q P L  LI E+QAD L LI +
Sbjct: 267 AGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINE 326

Query: 419 PVKGDEGEL-----------SSVTNEEREAMTRLEALGFSETVVQKVFLACNKDEELATK 273
           PV+G EG +            +VT EEREA+ RLEA+GF   +V +VF ACNK+EELA  
Sbjct: 327 PVEGGEGNILGQLAAAMPQAVTVTPEEREAIARLEAMGFDRALVLEVFFACNKNEELAAN 386

Query: 272 YLDFH 258
           YL  H
Sbjct: 387 YLLDH 391


>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223531394|gb|EEF33228.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 409

 Score =  144 bits (364), Expect = 2e-32
 Identities = 99/227 (43%), Positives = 118/227 (51%), Gaps = 57/227 (25%)
 Frame = -1

Query: 767 AIERVKDAGGRRWDWEDAERALRAAHNDECRAVTDLM-GITHQRE--------------- 636
           AI+++ D GG  WD +   RALRAA+N+  RAV  L  GI  Q E               
Sbjct: 177 AIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVPPVAPVSLSGQAAN 236

Query: 635 -----------ETVPSAGPNAN------QGIPDQQPEPVP-------------SNQFQAL 546
                        VPS GPNAN      QG+P+                    S QFQAL
Sbjct: 237 QPAQPQQPAQPAAVPSGGPNANPLDLFPQGLPNMGSGGAGAGAGAGTLDFLRNSQQFQAL 296

Query: 545 RAMVQTNPHILQPMLQELKRQKPNLAALIDENQADLLDLICQPVKGDEGELS-------- 390
           RAMVQ NP ILQPMLQEL +Q PNL  LI E+Q D L LI +PV+G EG +         
Sbjct: 297 RAMVQANPQILQPMLQELGKQNPNLVRLIQEHQTDFLRLINEPVEGGEGNIMGQLAAAMP 356

Query: 389 ---SVTNEEREAMTRLEALGFSETVVQKVFLACNKDEELATKYLDFH 258
              +VT EEREA+ RLEA+GF   +V +VF ACNK+EELA  YL  H
Sbjct: 357 QAVTVTPEEREAIERLEAMGFDRGLVLEVFFACNKNEELAANYLLDH 403


>gb|AFK43607.1| unknown [Lotus japonicus]
          Length = 228

 Score =  144 bits (362), Expect = 3e-32
 Identities = 97/220 (44%), Positives = 117/220 (53%), Gaps = 51/220 (23%)
 Frame = -1

Query: 764 IERVKDAGGRRWDWEDAERALRAAHNDECRAVTDLM-GITHQREE--------------- 633
           I+++ D GG  WD +   RALRAA N+  RAV  L  GI  Q E                
Sbjct: 2   IQQILDMGGGSWDRDTVVRALRAAFNNPERAVDYLYSGIPEQAEAPPVTQMPASAQPGNP 61

Query: 632 --------TVPSAGPNAN------QGIPDQQPEPVP---------SNQFQALRAMVQTNP 522
                    VPS+GPNAN      QG+P+    P           S QFQALRAMVQ NP
Sbjct: 62  PAAAPQLANVPSSGPNANPLDLFPQGLPNVGSGPAGAGSLDFLRNSQQFQALRAMVQANP 121

Query: 521 HILQPMLQELKRQKPNLAALIDENQADLLDLICQPVKGDEGEL------------SSVTN 378
            ILQPMLQEL +Q P+L  LI ++Q D L LI +PV+G EG +             SVT 
Sbjct: 122 QILQPMLQELGKQNPHLMRLIQDHQVDFLRLINEPVEGGEGNILGQPAGAAMPQAVSVTP 181

Query: 377 EEREAMTRLEALGFSETVVQKVFLACNKDEELATKYLDFH 258
           EEREA+ RLEA+GF    V +V+ ACNK+EELA  YL  H
Sbjct: 182 EEREAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDH 221


>ref|XP_002315945.1| predicted protein [Populus trichocarpa] gi|222864985|gb|EEF02116.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  141 bits (356), Expect = 2e-31
 Identities = 96/222 (43%), Positives = 119/222 (53%), Gaps = 52/222 (23%)
 Frame = -1

Query: 767 AIERVKDAGGRRWDWEDAERALRAAHNDECRAVTDLM-GITHQREE-------------- 633
           A++++ D GG  WD +   RALRAA+N+  RAV  L  GI  Q E               
Sbjct: 151 AVQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYTGIPEQAEAPPVAQVPVSEQAPA 210

Query: 632 -----------TVPSAGPNAN------QGIPDQQPEPVP---------SNQFQALRAMVQ 531
                      TVP+ GPNAN      QG+P+                S QFQALRAMVQ
Sbjct: 211 AQPRQQPAQPTTVPAGGPNANPLDLFPQGLPNIGSGAAEAGTLDFLRNSQQFQALRAMVQ 270

Query: 530 TNPHILQPMLQELKRQKPNLAALIDENQADLLDLICQPVKGDEGELS-----------SV 384
            NP ILQPMLQEL +Q P+L  LI E+Q D L LI +PV+G EG +S           +V
Sbjct: 271 ANPQILQPMLQELGKQNPHLMRLIQEHQDDFLRLINEPVEGGEGNVSGPLAAAMPQSVTV 330

Query: 383 TNEEREAMTRLEALGFSETVVQKVFLACNKDEELATKYLDFH 258
           T EEREA+ RL A+GF   +V +V+ ACNK+EELA  YL  H
Sbjct: 331 TPEEREAIERLGAMGFDPALVLEVYFACNKNEELAANYLLDH 372


>ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 1 [Vitis
           vinifera] gi|296087286|emb|CBI33660.3| unnamed protein
           product [Vitis vinifera]
          Length = 381

 Score =  141 bits (356), Expect = 2e-31
 Identities = 96/220 (43%), Positives = 118/220 (53%), Gaps = 49/220 (22%)
 Frame = -1

Query: 770 VAIERVKDAGGRRWDWEDAERALRAAHNDECRAVTDLM-GITHQRE-------------- 636
           V I+++ D GG  WD +   RALRAA+N+  RAV  L  GI  Q E              
Sbjct: 156 VTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEGPPAARPPASGLAV 215

Query: 635 -----------ETVPSAGPNAN------QGIPDQQPEPVP--------SNQFQALRAMVQ 531
                       TV S+GPNAN      QG+P                S QFQALRAMVQ
Sbjct: 216 NLPTQAPQGPQTTVASSGPNANPLDLFPQGLPSMGSNASAGTLDFLRNSPQFQALRAMVQ 275

Query: 530 TNPHILQPMLQELKRQKPNLAALIDENQADLLDLICQPVKGDEGELS---------SVTN 378
            NP ILQPMLQEL +Q P+L  LI E+QAD L LI +PV+G+   L          ++T 
Sbjct: 276 ANPQILQPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGEGNVLGQLGTVPQAVTITP 335

Query: 377 EEREAMTRLEALGFSETVVQKVFLACNKDEELATKYLDFH 258
           EERE++ RLEA+GF   +V +VF ACNK+EELA  YL  H
Sbjct: 336 EERESIERLEAMGFDRALVLEVFFACNKNEELAANYLLDH 375


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