BLASTX nr result

ID: Papaver22_contig00012628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00012628
         (1603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   372   e-100
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   365   1e-98
ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   364   3e-98
ref|XP_004146528.1| PREDICTED: general transcription factor IIE ...   363   7e-98
gb|AFK38914.1| unknown [Lotus japonicus]                              361   3e-97

>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score =  372 bits (954), Expect = e-100
 Identities = 186/246 (75%), Positives = 211/246 (85%), Gaps = 2/246 (0%)
 Frame = -3

Query: 1067 KSVPIATTSSIAAK--APAVKFSNDTERLQHINSIRKAPIGAQMKRVIAILYETREAFTA 894
            K+V +A   S +A+  APAVKFSNDTERLQHINSIRKAP GAQ+KRVI +L ETR+AFT 
Sbjct: 37   KTVAVAPAPSTSARTPAPAVKFSNDTERLQHINSIRKAPAGAQIKRVIDLLLETRQAFTP 96

Query: 893  EQINEVCYVDAVNNREVFSGLTNNPKVFYDGKRFSYKATHDLKNKKELLHLIRKFPEGKN 714
            EQIN+ CYVD  +N+ VF  L NNPKV YDGKRFSYK+ HDLK+K +LL LIRKFPEG  
Sbjct: 97   EQINDHCYVDMNSNKAVFDSLRNNPKVHYDGKRFSYKSKHDLKDKSQLLVLIRKFPEGIA 156

Query: 713  VIDLKDAYPTVLDDLQALKASGDVWLLSNFDSQEDVVFPNDPKITIKVDDDLKVLFRGIE 534
            VIDLKD+YP+V+DDLQALKA G +WLLSNFDSQED+ +PNDP++ IKVDDDLK LFRGIE
Sbjct: 157  VIDLKDSYPSVMDDLQALKAVGQIWLLSNFDSQEDIAYPNDPRMVIKVDDDLKQLFRGIE 216

Query: 533  LPRDMIDIEKDLQKNGMKPATNTAKRRAMAQVHGINPKPKAKKKTRDISKRTKLTNAHLP 354
            LPRDM+DIEKDLQKNGMKPATNTAKRRA AQV GI+ K KAKKK  +ISKRTKLTNAHLP
Sbjct: 217  LPRDMLDIEKDLQKNGMKPATNTAKRRAAAQVQGISTKQKAKKKKHEISKRTKLTNAHLP 276

Query: 353  ELFKNI 336
            ELFKN+
Sbjct: 277  ELFKNL 282


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
            communis] gi|223549654|gb|EEF51142.1| Transcription
            initiation factor IIE subunit beta, putative [Ricinus
            communis]
          Length = 282

 Score =  365 bits (938), Expect = 1e-98
 Identities = 176/229 (76%), Positives = 204/229 (89%)
 Frame = -3

Query: 1022 PAVKFSNDTERLQHINSIRKAPIGAQMKRVIAILYETREAFTAEQINEVCYVDAVNNREV 843
            PAVKFSNDTERLQHI+SIRKAP+GAQ+KRVI +L+ETR+AFT EQINE CYVD  +N+ V
Sbjct: 52   PAVKFSNDTERLQHIHSIRKAPVGAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAV 111

Query: 842  FSGLTNNPKVFYDGKRFSYKATHDLKNKKELLHLIRKFPEGKNVIDLKDAYPTVLDDLQA 663
            F  L NNPKV YDG+ FSYK+ HDLK+KK+LL+LIR+F EG  VIDLKDAYPTV++DLQA
Sbjct: 112  FDSLRNNPKVHYDGRHFSYKSKHDLKDKKQLLYLIREFKEGIAVIDLKDAYPTVMEDLQA 171

Query: 662  LKASGDVWLLSNFDSQEDVVFPNDPKITIKVDDDLKVLFRGIELPRDMIDIEKDLQKNGM 483
            LKA+G +WLLSNFDSQED+ +PNDPK  IKVDD+LKV FR IELPRDM+DIEKDLQKNGM
Sbjct: 172  LKAAGGIWLLSNFDSQEDIAYPNDPKAVIKVDDELKVKFREIELPRDMLDIEKDLQKNGM 231

Query: 482  KPATNTAKRRAMAQVHGINPKPKAKKKTRDISKRTKLTNAHLPELFKNI 336
            KPATNTAKRRA AQV GI+ KPK KKKT++ISK+TKLTNAHLPELF+N+
Sbjct: 232  KPATNTAKRRAAAQVQGISTKPKTKKKTKEISKKTKLTNAHLPELFQNL 280


>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
            vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
            product [Vitis vinifera]
          Length = 285

 Score =  364 bits (935), Expect = 3e-98
 Identities = 184/266 (69%), Positives = 211/266 (79%)
 Frame = -3

Query: 1133 CKGTCSQIXXXXXXXXXSAPHHKSVPIATTSSIAAKAPAVKFSNDTERLQHINSIRKAPI 954
            C+ T + I         + P  K  P A T       PAVKFSNDTERLQHINSIRKAP+
Sbjct: 17   CQSTLTSIAAKAGSSKPTVPQ-KFTPAAPTKP---PTPAVKFSNDTERLQHINSIRKAPV 72

Query: 953  GAQMKRVIAILYETREAFTAEQINEVCYVDAVNNREVFSGLTNNPKVFYDGKRFSYKATH 774
            GAQ+KRVI +L ETR+AFT EQINE CYVD   N+ VF  L NNPKV YDGKRF+YK+ H
Sbjct: 73   GAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLRNNPKVSYDGKRFAYKSKH 132

Query: 773  DLKNKKELLHLIRKFPEGKNVIDLKDAYPTVLDDLQALKASGDVWLLSNFDSQEDVVFPN 594
            DLK++ +LL L+RKFPEG  VIDLKD+YP+V++DLQALKA+G VWLLSNFDSQED+ +PN
Sbjct: 133  DLKDRSQLLVLVRKFPEGIAVIDLKDSYPSVMEDLQALKAAGQVWLLSNFDSQEDIAYPN 192

Query: 593  DPKITIKVDDDLKVLFRGIELPRDMIDIEKDLQKNGMKPATNTAKRRAMAQVHGINPKPK 414
            DP++ IKVDDDLK  FR IELPRDM+DIEKDLQKNGMKPATNTAKRRAMAQVHGI  K K
Sbjct: 193  DPRVPIKVDDDLKQFFRTIELPRDMLDIEKDLQKNGMKPATNTAKRRAMAQVHGIASKSK 252

Query: 413  AKKKTRDISKRTKLTNAHLPELFKNI 336
             KKK  +ISKRTKLTNAHLPELF+N+
Sbjct: 253  PKKKKHEISKRTKLTNAHLPELFQNL 278


>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
            sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
            general transcription factor IIE subunit 2-like [Cucumis
            sativus]
          Length = 277

 Score =  363 bits (932), Expect = 7e-98
 Identities = 180/243 (74%), Positives = 205/243 (84%)
 Frame = -3

Query: 1067 KSVPIATTSSIAAKAPAVKFSNDTERLQHINSIRKAPIGAQMKRVIAILYETREAFTAEQ 888
            K  P    S     APAVKFSNDTERLQHINSIRK+P+GAQ+KRVI +L ETR+AFT EQ
Sbjct: 36   KFTPAPAASIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQ 95

Query: 887  INEVCYVDAVNNREVFSGLTNNPKVFYDGKRFSYKATHDLKNKKELLHLIRKFPEGKNVI 708
            INE CYVD  +N+ V+  L NNPKV YDG+RFSYK+ HDLK+K +LL+L+RKFPEG  VI
Sbjct: 96   INEACYVDINSNKAVYDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVI 155

Query: 707  DLKDAYPTVLDDLQALKASGDVWLLSNFDSQEDVVFPNDPKITIKVDDDLKVLFRGIELP 528
            DLKDAYP+V++DLQALKASG VWLLSNFDSQED+ +PNDP+I IKVDDDLK LFR IELP
Sbjct: 156  DLKDAYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELP 215

Query: 527  RDMIDIEKDLQKNGMKPATNTAKRRAMAQVHGINPKPKAKKKTRDISKRTKLTNAHLPEL 348
            RDM+D+EKDLQKNGMKPATNTAKRRA AQ H  + KPK KKK ++ISKRTKLTNAHLPEL
Sbjct: 216  RDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPKPKKKKQEISKRTKLTNAHLPEL 274

Query: 347  FKN 339
            FKN
Sbjct: 275  FKN 277


>gb|AFK38914.1| unknown [Lotus japonicus]
          Length = 278

 Score =  361 bits (926), Expect = 3e-97
 Identities = 173/227 (76%), Positives = 203/227 (89%)
 Frame = -3

Query: 1016 VKFSNDTERLQHINSIRKAPIGAQMKRVIAILYETREAFTAEQINEVCYVDAVNNREVFS 837
            VKFSNDTERLQHINSIRKAP+GAQMKRVIA+L+E+R+AFT EQINE CYVD   N++VF 
Sbjct: 49   VKFSNDTERLQHINSIRKAPVGAQMKRVIALLFESRQAFTMEQINEACYVDMRANKDVFD 108

Query: 836  GLTNNPKVFYDGKRFSYKATHDLKNKKELLHLIRKFPEGKNVIDLKDAYPTVLDDLQALK 657
             +  NPKV +DG++FSYK+ HDL++KKELL LIRKFPEG  VIDLKD+YPTVL+DLQALK
Sbjct: 109  SMRKNPKVKFDGEKFSYKSKHDLRDKKELLFLIRKFPEGIAVIDLKDSYPTVLEDLQALK 168

Query: 656  ASGDVWLLSNFDSQEDVVFPNDPKITIKVDDDLKVLFRGIELPRDMIDIEKDLQKNGMKP 477
            A+ ++WLLSNFDSQED+ +PNDPK+ IKVDDDLK LFRGIELPRDMIDIE+DLQKNGMKP
Sbjct: 169  AAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKP 228

Query: 476  ATNTAKRRAMAQVHGINPKPKAKKKTRDISKRTKLTNAHLPELFKNI 336
            ATNTAKRR+ AQ+ GI+ KPK KKK  +I+KRTKLTNAHLPELF+N+
Sbjct: 229  ATNTAKRRSAAQMQGISSKPKPKKKKNEITKRTKLTNAHLPELFQNL 275


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