BLASTX nr result

ID: Papaver22_contig00012598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00012598
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_192778.2| F-box protein [Arabidopsis thaliana] gi|1453330...    89   5e-16
ref|NP_192730.2| FBD, F-box and leucine rich repeat domain-conta...    89   5e-16
emb|CAB39793.1| putative protein [Arabidopsis thaliana] gi|72677...    89   5e-16
emb|CAB39616.1| hypothetical protein (probably remnant) [Arabido...    89   5e-16
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|NP_192778.2| F-box protein [Arabidopsis thaliana]
           gi|145333003|ref|NP_001078367.1| F-box protein
           [Arabidopsis thaliana]
           gi|142989615|sp|Q9SV82.2|FBD40_ARATH RecName:
           Full=FBD-associated F-box protein At4g10400
           gi|119935957|gb|ABM06044.1| At4g10400 [Arabidopsis
           thaliana] gi|332657476|gb|AEE82876.1| F-box protein
           [Arabidopsis thaliana] gi|332657477|gb|AEE82877.1| F-box
           protein [Arabidopsis thaliana]
          Length = 409

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = +2

Query: 29  TQSSTNSFMDFVDRVLLLRNMSDIKKFCLTCNGEYFDDQRIKAWILTAIQCRVEEL-IVS 205
           ++S       F+DR L L     I+ F L  +  +F  + I+ W++ A+   + EL I S
Sbjct: 52  SESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYS 111

Query: 206 RDANERVDIIPVDLYTCESLTLLDIDLFGGQHLNLPQLISFPRLKILQLDDISVYRQRNI 385
               E+ +I+P  LYTC+SL +L +D  GG  L++P+++  P LK L+L  +  ++Q ++
Sbjct: 112 SHYGEKQNILPSSLYTCKSLVILKLD--GGVLLDVPRMVCLPSLKTLELKGVRYFKQGSL 169

Query: 386 QQLFSNCPVLEEL 424
           Q+L  NCPVLE+L
Sbjct: 170 QRLLCNCPVLEDL 182


>ref|NP_192730.2| FBD, F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
           gi|378405162|sp|Q9T0F1.2|FB226_ARATH RecName: Full=F-box
           protein At4g09920 gi|332657412|gb|AEE82812.1| FBD, F-box
           and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
          Length = 316

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = +2

Query: 29  TQSSTNSFMDFVDRVLLLRNMSDIKKFCLTCNGEYFDDQRIKAWILTAIQCRVEEL-IVS 205
           ++S       F+DR L L     I+ F L  +  +F  + I+ W++ A+   + EL I S
Sbjct: 52  SESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYS 111

Query: 206 RDANERVDIIPVDLYTCESLTLLDIDLFGGQHLNLPQLISFPRLKILQLDDISVYRQRNI 385
               E+ +I+P  LYTC+SL +L +D  GG  L++P+++  P LK L+L  +  ++Q ++
Sbjct: 112 SHYGEKQNILPSSLYTCKSLVILKLD--GGVLLDVPRMVCLPSLKTLELKGVRYFKQGSL 169

Query: 386 QQLFSNCPVLEEL 424
           Q+L  NCPVLE+L
Sbjct: 170 QRLLCNCPVLEDL 182


>emb|CAB39793.1| putative protein [Arabidopsis thaliana] gi|7267737|emb|CAB78163.1|
           putative protein [Arabidopsis thaliana]
          Length = 326

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = +2

Query: 29  TQSSTNSFMDFVDRVLLLRNMSDIKKFCLTCNGEYFDDQRIKAWILTAIQCRVEEL-IVS 205
           ++S       F+DR L L     I+ F L  +  +F  + I+ W++ A+   + EL I S
Sbjct: 52  SESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYS 111

Query: 206 RDANERVDIIPVDLYTCESLTLLDIDLFGGQHLNLPQLISFPRLKILQLDDISVYRQRNI 385
               E+ +I+P  LYTC+SL +L +D  GG  L++P+++  P LK L+L  +  ++Q ++
Sbjct: 112 SHYGEKQNILPSSLYTCKSLVILKLD--GGVLLDVPRMVCLPSLKTLELKGVRYFKQGSL 169

Query: 386 QQLFSNCPVLEEL 424
           Q+L  NCPVLE+L
Sbjct: 170 QRLLCNCPVLEDL 182


>emb|CAB39616.1| hypothetical protein (probably remnant) [Arabidopsis thaliana]
           gi|7267688|emb|CAB78115.1| hypothetical protein
           (probably remnant) [Arabidopsis thaliana]
          Length = 414

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = +2

Query: 29  TQSSTNSFMDFVDRVLLLRNMSDIKKFCLTCNGEYFDDQRIKAWILTAIQCRVEEL-IVS 205
           ++S       F+DR L L     I+ F L  +  +F  + I+ W++ A+   + EL I S
Sbjct: 52  SESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYS 111

Query: 206 RDANERVDIIPVDLYTCESLTLLDIDLFGGQHLNLPQLISFPRLKILQLDDISVYRQRNI 385
               E+ +I+P  LYTC+SL +L +D  GG  L++P+++  P LK L+L  +  ++Q ++
Sbjct: 112 SHYGEKQNILPSSLYTCKSLVILKLD--GGVLLDVPRMVCLPSLKTLELKGVRYFKQGSL 169

Query: 386 QQLFSNCPVLEEL 424
           Q+L  NCPVLE+L
Sbjct: 170 QRLLCNCPVLEDL 182


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 51/125 (40%), Positives = 70/125 (56%)
 Frame = +2

Query: 50  FMDFVDRVLLLRNMSDIKKFCLTCNGEYFDDQRIKAWILTAIQCRVEELIVSRDANERVD 229
           FMDFVDRVL LR  S+I +F L+C  +  D  R+  WI  A+   V++L +     E   
Sbjct: 81  FMDFVDRVLALRGPSNIVQFYLSCEVK-DDPSRVGTWISAAVNRNVKDLYLELRDFEASF 139

Query: 230 IIPVDLYTCESLTLLDIDLFGGQHLNLPQLISFPRLKILQLDDISVYRQRNIQQLFSNCP 409
           ++P  L+ CE+LT L+I++     L LP  IS   LKIL L ++      + QQLFS  P
Sbjct: 140 VLPHCLFNCETLTELEINM--PYILKLPSSISLSCLKILNLYEVIFTDDHSTQQLFS-LP 196

Query: 410 VLEEL 424
            L EL
Sbjct: 197 NLVEL 201


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