BLASTX nr result
ID: Papaver22_contig00012342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00012342
(1519 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 294 2e-90
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 290 9e-90
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 289 2e-89
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 271 1e-82
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 308 2e-81
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 294 bits (753), Expect(2) = 2e-90
Identities = 161/440 (36%), Positives = 248/440 (56%), Gaps = 22/440 (5%)
Frame = -2
Query: 1413 SPYYLHPSDHTGMVISPVKLNDDNYEEWXXXXXXXXXXXRKYSFLEGKITQPKEDDPDIE 1234
SPY L SD+ G VIS V+LN DNY +W RK F+ G I +P +DP+ E
Sbjct: 30 SPYTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYE 89
Query: 1233 DWWSVNSMIVGWIATSIEPNLRSTITYYETAKELWDDLKNSFSIGNGPRMLQLRSDLAKC 1054
+W +VNSMIVGWI TSIEP +++T+T+ A LW DLK FS+GN R+ Q+R+ L+ C
Sbjct: 90 NWTAVNSMIVGWIRTSIEPKVKATVTFISDAHLLWKDLKQRFSVGNKVRIHQIRAQLSSC 149
Query: 1053 RQDGQAIAAYFGRMKVLWEELSNHVRPPMCSCNKCTCSLAAQWDKQREEERVHQFLMGLD 874
RQDGQA+ Y+GR+ LWEE + + +C+C C C ++ K+REEE++HQF++GLD
Sbjct: 150 RQDGQAVIEYYGRLSNLWEEYNIYKPVTVCTCGLCRCGATSEPTKEREEEKIHQFVLGLD 209
Query: 873 DAIYGNVRSHIIAQDPLPSLCRVYALVMQEERHHTIARTRDVRVEAVGFAVQ-------- 718
++ +G + + +I DPLPSL +Y+ V++EE+ R+ + EAVGF +
Sbjct: 210 ESRFGGLCATLINMDPLPSLGEIYSRVIREEQRLASVHVREQKEEAVGFLARREQLDHHS 269
Query: 717 -----APKATRGPTSRMSITSVDKPACKNCGKSGHEMVNCFKLVGYPDWWLEKHGKGNG- 556
+ ++ SR + + C NCG++GHE C+++VG+PDWW E++G G G
Sbjct: 270 RVDASSSRSEHTGGSRSNSIIKGRVTCSNCGRTGHEKKECWQIVGFPDWWSERNG-GRGS 328
Query: 555 ---GRAYQGSNNSQGK-----THSSVSNSTIFPTSGGENFSGISRSTQDREALMNTLTDS 400
GR +GSN +G+ H++ SNS++FP E+ +S+ +++ +T
Sbjct: 329 NGRGRGGRGSNGGRGQGQVMAAHATSSNSSVFPEFTEEHMRVLSQLVKEKSNSGSTSN-- 386
Query: 399 *LIAIANVLNSSNKESSKGNLTSKWILDTGASIHMTRHKELLLHLQQIGLSPIGLPNGTY 220
N+S++ S K L ILD+GAS HMT L ++ + P+G +G+
Sbjct: 387 ---------NNSDRLSGKTKL-GDIILDSGASHHMTGTLSSLTNVVPVPPCPVGFADGSK 436
Query: 219 LHAQCEGTIVFGPNLKLNHV 160
A G + + L +V
Sbjct: 437 AFALSVGVLTLSNTVSLTNV 456
Score = 66.2 bits (160), Expect(2) = 2e-90
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = -1
Query: 160 LFVPSLNCNLVSLACLINDMKCMVTLTDKPCLIQDRTTRTLIGVGEQEDGVY 5
LFVPSLNC L+S++ L+ +C+ T TD C +QDR+++TLIG GE+ GVY
Sbjct: 457 LFVPSLNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGEERGGVY 508
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 290 bits (742), Expect(2) = 9e-90
Identities = 160/433 (36%), Positives = 238/433 (54%), Gaps = 15/433 (3%)
Frame = -2
Query: 1413 SPYYLHPSDHTGMVISPVKLNDDNYEEWXXXXXXXXXXXRKYSFLEGKITQPKEDDPDIE 1234
SPY L SD+ G +IS V L DNY EW RK F+ G I++P D+PD E
Sbjct: 25 SPYTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFINGSISKPPLDNPDYE 84
Query: 1233 DWWSVNSMIVGWIATSIEPNLRSTITYYETAKELWDDLKNSFSIGNGPRMLQLRSDLAKC 1054
+W +VNSMIVGWI SIEP ++ST+T+ A +LW +LK FS+GN R+ Q+++ LA C
Sbjct: 85 NWQAVNSMIVGWIRASIEPKVKSTVTFISDAHQLWSELKQRFSVGNKVRVHQIKAQLAAC 144
Query: 1053 RQDGQAIAAYFGRMKVLWEELSNHVRPPMCSCNKCTCSLAAQWDKQREEERVHQFLMGLD 874
RQDGQ + Y+GR+ LWEE + +C C CTC + K+REEE++HQF++GLD
Sbjct: 145 RQDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLD 204
Query: 873 DAIYGNVRSHIIAQDPLPSLCRVYALVMQEERHHTIARTRDVRVEAVGFAVQAPKATR-G 697
D+ +G + + +IA DP PSL +Y+ V++EE+ + R+ + A+GF + + T G
Sbjct: 205 DSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGFLTRQSEVTADG 264
Query: 696 PTSRMSITSVDKPA-CKNCGKSGHEMVNCFKLVGYPDWWLEK--------HGKGNGGRAY 544
T I S D+ C +CG+SGHE +C+++VG+PDWW E+ +G GGR+
Sbjct: 265 RTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRGGRSS 324
Query: 543 QGSNNSQGK-----THSSVSNSTIFPTSGGENFSGISRSTQDREALMNTLTDS*LIAIAN 379
+N+ +G+ H++ SN + FP + I++ Q++
Sbjct: 325 GSNNSGRGRGQVTAAHATTSNLSSFPEFTPDQLRVITQMIQNKNN--------------- 369
Query: 378 VLNSSNKESSKGNLTSKWILDTGASIHMTRHKELLLHLQQIGLSPIGLPNGTYLHAQCEG 199
+S+K S K L ILDTGAS HMT LL ++ I +G + A G
Sbjct: 370 --GTSDKLSGKMKL-GDVILDTGASHHMTGQLSLLTNIVTIPSCSVGFADDRKTFAISMG 426
Query: 198 TIVFGPNLKLNHV 160
T + L++V
Sbjct: 427 TFKLSETVSLSNV 439
Score = 68.6 bits (166), Expect(2) = 9e-90
Identities = 28/52 (53%), Positives = 41/52 (78%)
Frame = -1
Query: 160 LFVPSLNCNLVSLACLINDMKCMVTLTDKPCLIQDRTTRTLIGVGEQEDGVY 5
L+VP+LNC+L+S++ L+ +KC+ TD C++QDR +RTLIG GE+ DGVY
Sbjct: 440 LYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVY 491
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 289 bits (739), Expect(2) = 2e-89
Identities = 160/433 (36%), Positives = 238/433 (54%), Gaps = 15/433 (3%)
Frame = -2
Query: 1413 SPYYLHPSDHTGMVISPVKLNDDNYEEWXXXXXXXXXXXRKYSFLEGKITQPKEDDPDIE 1234
SPY L SD+ G +IS V L DNY EW RK F+ G I++P D+PD E
Sbjct: 25 SPYTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKTGFINGSISKPPLDNPDYE 84
Query: 1233 DWWSVNSMIVGWIATSIEPNLRSTITYYETAKELWDDLKNSFSIGNGPRMLQLRSDLAKC 1054
+W +VNSMIVGWI SIEP ++ST+T+ A +LW +LK FS+GN + Q+++ LA C
Sbjct: 85 NWQAVNSMIVGWIRASIEPKVKSTVTFICDAHQLWSELKQRFSVGNKVHVHQIKTQLAAC 144
Query: 1053 RQDGQAIAAYFGRMKVLWEELSNHVRPPMCSCNKCTCSLAAQWDKQREEERVHQFLMGLD 874
RQDGQ + Y+GR+ LWEE + +C C CTC + K+REEE++HQF++GLD
Sbjct: 145 RQDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLD 204
Query: 873 DAIYGNVRSHIIAQDPLPSLCRVYALVMQEERHHTIARTRDVRVEAVGFAVQAPKATR-G 697
D+ +G + + +IA DP PSL +Y+ V++EE+ + R+ + A+GF + + T G
Sbjct: 205 DSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGFLTRQSEVTADG 264
Query: 696 PTSRMSITSVDKPA-CKNCGKSGHEMVNCFKLVGYPDWWLEK--------HGKGNGGRAY 544
T I S D+ C +CG+SGHE +C+++VG+PDWW E+ +G GGR+
Sbjct: 265 RTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRGGRSS 324
Query: 543 QGSNNSQGK-----THSSVSNSTIFPTSGGENFSGISRSTQDREALMNTLTDS*LIAIAN 379
+N+ +G+ H++ SN + FP + I++ Q++
Sbjct: 325 GSNNSGRGRGQVTAAHATTSNLSPFPEFTPDQLRVITQMIQNKNN--------------- 369
Query: 378 VLNSSNKESSKGNLTSKWILDTGASIHMTRHKELLLHLQQIGLSPIGLPNGTYLHAQCEG 199
+S+K S K L ILDTGAS HMT LL ++ I +G +G A G
Sbjct: 370 --GTSDKLSGKMKL-GDVILDTGASHHMTGQLSLLTNIVTIPSCSVGFADGRKTFAISMG 426
Query: 198 TIVFGPNLKLNHV 160
T + L++V
Sbjct: 427 TFKLSETVSLSNV 439
Score = 68.6 bits (166), Expect(2) = 2e-89
Identities = 28/52 (53%), Positives = 41/52 (78%)
Frame = -1
Query: 160 LFVPSLNCNLVSLACLINDMKCMVTLTDKPCLIQDRTTRTLIGVGEQEDGVY 5
L+VP+LNC+L+S++ L+ +KC+ TD C++QDR +RTLIG GE+ DGVY
Sbjct: 440 LYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVY 491
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 271 bits (693), Expect(2) = 1e-82
Identities = 161/420 (38%), Positives = 230/420 (54%), Gaps = 13/420 (3%)
Frame = -2
Query: 1413 SPYYLHPSDHTGMVISPVKLNDDNYEEWXXXXXXXXXXXRKYSFLEGKITQPKEDDPDIE 1234
SPY + SD+ G +IS V L +DNY EW +K FL+G I +P + P +
Sbjct: 12 SPYGITASDNPGALISSVILKEDNYSEWAEELMNSLQAKQKLGFLDGTIPKPTTE-PALS 70
Query: 1233 DWWSVNSMIVGWIATSIEPNLRSTITYYETAKELWDDLKNSFSIGNGPRMLQLRSDLAKC 1054
W + NSMI+GWI TSI+P +RST+ + AK+LWD LK FS GNG R L+ ++ C
Sbjct: 71 SWKAANSMIIGWIRTSIDPTIRSTVAFVSDAKDLWDSLKQRFSNGNGVRKQLLKDEILAC 130
Query: 1053 RQDGQAIAAYFGRMKVLWEELSNHVRPPMCSCNKCTCSLAAQWDKQREEERVHQFLMGLD 874
+QDGQ++ Y+GR+ LWEEL N+ + CTC A K+RE+++VHQFL+ LD
Sbjct: 131 KQDGQSVLVYYGRLTKLWEELQNYK-----TSRTCTCEAAPDIAKEREDDKVHQFLLNLD 185
Query: 873 DAIYGNVRSHIIAQDPLPSLCRVYALVMQEERHHTIARTR-DVRVEAVGFAVQAPKATRG 697
+ + +RS I QDPLP+L +VY+ V+ EE++ +R + D++ EAVGF VQA
Sbjct: 186 ER-FRPIRSTITVQDPLPALNQVYSRVIHEEQNLNASRIKDDIKTEAVGFTVQATPLP-- 242
Query: 696 PTSRMSITSVDK------PACKNCGKSGHEMVNCFKLVGYPDWWLEKH------GKGNGG 553
PT +++ S + C + + GH++ CF + GYPDWWLE++ G+G G
Sbjct: 243 PTPQVAAVSAPRFRDRSSLTCTHYHRQGHDITECFLVHGYPDWWLEQNGSNGSAGRGTSG 302
Query: 552 RAYQGSNNSQGKTHSSVSNSTIFPTSGGENFSGISRSTQDREALMNTLTDS*LIAIANVL 373
R G N+ SS S S + + ST +N L L+ N
Sbjct: 303 RGNNGRGNNNRGGRSSSSGSRGKGRANAASTHPPPTSTPSNADQINQLIS--LLQAQNPA 360
Query: 372 NSSNKESSKGNLTSKWILDTGASIHMTRHKELLLHLQQIGLSPIGLPNGTYLHAQCEGTI 193
SS K S K T+ I+DTGAS HMT LL +++ I SP+ P+GT A GT+
Sbjct: 361 TSSQKLSGK-TFTTYVIIDTGASHHMTGDITLLTNVEDIIPSPVTKPDGTASRATKRGTL 419
Score = 63.9 bits (154), Expect(2) = 1e-82
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -1
Query: 205 RGNYCVWA*FKTESCLFVPSLNCNLVSLACLINDMKCMVTLTDKPCLIQDRTTRTLIGVG 26
RG + + LFVP NC L+S+A L+ C+ TD C +QDR TRTLIG G
Sbjct: 416 RGTLALHNAYVLPDVLFVPDFNCTLISVAKLLKHTGCVAIFTDTLCFLQDRFTRTLIGAG 475
Query: 25 EQEDGVY 5
E+ +GVY
Sbjct: 476 EEREGVY 482
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 308 bits (790), Expect = 2e-81
Identities = 164/441 (37%), Positives = 256/441 (58%), Gaps = 11/441 (2%)
Frame = -2
Query: 1449 TTSNGEIFFDSSSPYYLHPSDHTGMVISPVKLNDDNYEEWXXXXXXXXXXXRKYSFLEGK 1270
TT++ E S+SPYYLHPSDH V++P+ LN +NYE W +K F++G
Sbjct: 11 TTASSEKDAISASPYYLHPSDHPHHVLTPMLLNGENYERWAKLTRNNLQAKQKLGFIDGT 70
Query: 1269 ITQPKEDDPDIEDWWSVNSMIVGWIATSIEPNLRSTITYYETAKELWDDLKNSFSIGNGP 1090
+T+P D PD W NSM+VGW+ S++P ++ +I+ + A+ +W+ L+ +S+GN
Sbjct: 71 LTKPSSDSPDYPRWLQTNSMLVGWLYASLDPQVQKSISVVDNARVMWESLRTRYSVGNAS 130
Query: 1089 RMLQLRSDLAKCRQDGQAIAAYFGRMKVLWEELSNHVRPPMCSCNKCTCSLAAQWDKQRE 910
R+ QL+ D+ CRQDGQ A YFG++KV+W++L ++ C CN+ +C+ + ++R+
Sbjct: 131 RVHQLKYDIVACRQDGQTAANYFGKLKVMWDDLDDYEPLLTCCCNRPSCTHRVRQSQRRD 190
Query: 909 EERVHQFLMGLDDAIYGNVRSHI---IAQDPLPSLCRVYALVMQEERHHTIARTRDVRVE 739
ER+HQFLMGLD A +G R++I +++D SL +Y+ ++ EERH TI R+++ RV+
Sbjct: 191 HERIHQFLMGLDAAKFGTSRTNILGRLSRDDNISLDSIYSEIIAEERHLTITRSKEERVD 250
Query: 738 AVGFAVQAPKATRGPTSRMSITSVDKPA-CKNCGKSGHEMVNCFKLVGYPDWWLEKHGKG 562
AVGFAVQ G + S+T V+ C +CG+S H CFKL G P+W+ EK+G
Sbjct: 251 AVGFAVQT-----GVNAIASVTRVNNMGPCTHCGRSNHSADTCFKLHGVPEWYTEKYGDT 305
Query: 561 NGGRAY------QGSNNSQGKTHSSVSNSTIFPTSGGENFSGISRSTQDR-EALMNTLTD 403
+ GR +G G ++ + + T P+S FS I +++ A+ N L
Sbjct: 306 SSGRGRGRSSTPRGRGRGHGNSYKANNAQTSHPSSSASEFSDIPGVSKEAWSAIRNLLKQ 365
Query: 402 S*LIAIANVLNSSNKESSKGNLTSKWILDTGASIHMTRHKELLLHLQQIGLSPIGLPNGT 223
+ SS K S K N +++D+GAS HMT +LL + +I S + LPN
Sbjct: 366 -------DTATSSEKLSGKTNCVD-FLIDSGASHHMTGFLDLLTEIYEIPHSVVVLPNAK 417
Query: 222 YLHAQCEGTIVFGPNLKLNHV 160
+ A +GT++ G N+KL HV
Sbjct: 418 HTIATKKGTLILGANMKLTHV 438
Score = 68.6 bits (166), Expect = 4e-09
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = -1
Query: 226 HILARSMRGNYCVWA*FKTESCLFVPSLNCNLVSLACLINDMKCMVTLTDKPCLIQDRTT 47
H +A + +G + A K LFVP L+C L+S+A L+ ++ C TDK C+IQDRT+
Sbjct: 418 HTIA-TKKGTLILGANMKLTHVLFVPDLSCTLISVARLLRELHCFAIFTDKVCVIQDRTS 476
Query: 46 RTLIGVGEQEDGVY 5
+ LIGVG + +GVY
Sbjct: 477 KMLIGVGTESNGVY 490