BLASTX nr result
ID: Papaver22_contig00011776
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00011776
(686 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001768223.1| predicted protein [Physcomitrella patens sub... 209 6e-67
ref|XP_001785044.1| predicted protein [Physcomitrella patens sub... 209 6e-67
ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing fact... 209 4e-66
ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing fact... 209 5e-66
ref|XP_003626843.1| Pre-mRNA splicing factor [Medicago truncatul... 208 9e-65
>ref|XP_001768223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680401|gb|EDQ66837.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 2358
Score = 209 bits (533), Expect(3) = 6e-67
Identities = 118/212 (55%), Positives = 137/212 (64%), Gaps = 54/212 (25%)
Frame = +1
Query: 28 RYIHKSVWTGQKRLGQLAKWKTAEEVVALVQSLPIEEQPNQIIITCTGMVNPLEVHFLNF 207
+ IH SVW GQKRLGQLAKWKTAEEV ALV+SLP+EEQP QII+T GM++PLEVH L+F
Sbjct: 1843 KVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDF 1902
Query: 208 PNVFIKGSELQLPF*AWLKIEKFGDLTLKATEPQMLLFNLFDEWL--------------- 342
PN+ IKGSELQLPF A LKIEKFGDL LKATEPQM+LFN++D+WL
Sbjct: 1903 PNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILI 1962
Query: 343 --------------------------------------KVKVSLRDLIVSYYAQKNNMNR 408
KV+V+LRDLI+S YA+KNN+N
Sbjct: 1963 LRALHVNNEKAKMLLKPDKTVVTEPHHIWPNLSDDQWMKVEVALRDLILSDYAKKNNVNT 2022
Query: 409 SALIQSGICDITLGADITPPS-QHHQLQEIEK 501
SAL QS I DI LGA+ITPPS Q Q+ EIEK
Sbjct: 2023 SALTQSEIRDIILGAEITPPSQQRQQIAEIEK 2054
Score = 55.1 bits (131), Expect(3) = 6e-67
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = +3
Query: 498 KATKESSKLTAVTTKTTNVHGGELIVTTTSPFDNEQY 608
K KE+S+LTAVTTKTTNVHG +LIVTTTSP++ +
Sbjct: 2054 KQAKEASQLTAVTTKTTNVHGDDLIVTTTSPYEQAAF 2090
Score = 37.0 bits (84), Expect(3) = 6e-67
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2
Query: 605 VSKTDWHEIGYTYIMLKKIFKKFICVA 685
V+ D E GYTYIM K + KKFIC+A
Sbjct: 2115 VNSDDIKESGYTYIMPKNVLKKFICIA 2141
>ref|XP_001785044.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663393|gb|EDQ50159.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 2334
Score = 209 bits (533), Expect(3) = 6e-67
Identities = 118/212 (55%), Positives = 137/212 (64%), Gaps = 54/212 (25%)
Frame = +1
Query: 28 RYIHKSVWTGQKRLGQLAKWKTAEEVVALVQSLPIEEQPNQIIITCTGMVNPLEVHFLNF 207
+ IH SVW GQKRLGQLAKWKTAEEV ALV+SLP+EEQP QII+T GM++PLEVH L+F
Sbjct: 1819 KVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDF 1878
Query: 208 PNVFIKGSELQLPF*AWLKIEKFGDLTLKATEPQMLLFNLFDEWL--------------- 342
PN+ IKGSELQLPF A LKIEKFGDL LKATEPQM+LFN++D+WL
Sbjct: 1879 PNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLILI 1938
Query: 343 --------------------------------------KVKVSLRDLIVSYYAQKNNMNR 408
KV+V+LRDLI+S YA+KNN+N
Sbjct: 1939 LRALHVNNEKAKMLLKPDKTVVTEPHHIWPNLSDDQWMKVEVALRDLILSDYAKKNNVNT 1998
Query: 409 SALIQSGICDITLGADITPPS-QHHQLQEIEK 501
SAL QS I DI LGA+ITPPS Q Q+ EIEK
Sbjct: 1999 SALTQSEIRDIILGAEITPPSQQRQQIAEIEK 2030
Score = 55.1 bits (131), Expect(3) = 6e-67
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = +3
Query: 498 KATKESSKLTAVTTKTTNVHGGELIVTTTSPFDNEQY 608
K KE+S+LTAVTTKTTNVHG +LIVTTTSP++ +
Sbjct: 2030 KQAKEASQLTAVTTKTTNVHGDDLIVTTTSPYEQAAF 2066
Score = 37.0 bits (84), Expect(3) = 6e-67
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2
Query: 605 VSKTDWHEIGYTYIMLKKIFKKFICVA 685
V+ D E GYTYIM K + KKFIC+A
Sbjct: 2091 VNSDDIKESGYTYIMPKNVLKKFICIA 2117
>ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
Length = 2358
Score = 209 bits (533), Expect(3) = 4e-66
Identities = 118/212 (55%), Positives = 137/212 (64%), Gaps = 54/212 (25%)
Frame = +1
Query: 28 RYIHKSVWTGQKRLGQLAKWKTAEEVVALVQSLPIEEQPNQIIITCTGMVNPLEVHFLNF 207
+ IH SVW GQKRLGQLAKWKTAEEV ALV+SLP+EEQP QII+T GM++PLEVH L+F
Sbjct: 1842 KVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDF 1901
Query: 208 PNVFIKGSELQLPF*AWLKIEKFGDLTLKATEPQMLLFNLFDEWL--------------- 342
PN+ IKGSELQLPF A LKIEKFGDL LKATEPQM+LFN++D+WL
Sbjct: 1902 PNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILI 1961
Query: 343 --------------------------------------KVKVSLRDLIVSYYAQKNNMNR 408
KV+V+LRDLI+S YA+KNN+N
Sbjct: 1962 LRALHVNNEKAKMLLKPDKTIITEPHHIWPSLSDDQWMKVEVALRDLILSDYAKKNNVNT 2021
Query: 409 SALIQSGICDITLGADITPPS-QHHQLQEIEK 501
SAL QS I DI LGA+ITPPS Q Q+ EIEK
Sbjct: 2022 SALTQSEIRDIILGAEITPPSQQRQQIAEIEK 2053
Score = 51.2 bits (121), Expect(3) = 4e-66
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +3
Query: 498 KATKESSKLTAVTTKTTNVHGGELIVTTTSPFDNEQY 608
K E++++TAVTTKTTNVHG ELIVTTTSP++ +
Sbjct: 2053 KQAHEANQVTAVTTKTTNVHGEELIVTTTSPYEQAAF 2089
Score = 38.1 bits (87), Expect(3) = 4e-66
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 605 VSKTDWHEIGYTYIMLKKIFKKFICVA 685
V+ D E GYTYIM K I KKFICVA
Sbjct: 2114 VNSEDIKETGYTYIMPKNILKKFICVA 2140
>ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
Length = 2358
Score = 209 bits (533), Expect(3) = 5e-66
Identities = 118/212 (55%), Positives = 137/212 (64%), Gaps = 54/212 (25%)
Frame = +1
Query: 28 RYIHKSVWTGQKRLGQLAKWKTAEEVVALVQSLPIEEQPNQIIITCTGMVNPLEVHFLNF 207
+ IH SVW GQKRLGQLAKWKTAEEV ALV+SLP+EEQP QII+T GM++PLEVH L+F
Sbjct: 1842 KVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDF 1901
Query: 208 PNVFIKGSELQLPF*AWLKIEKFGDLTLKATEPQMLLFNLFDEWL--------------- 342
PN+ IKGSELQLPF A LKIEKFGDL LKATEPQM+LFN++D+WL
Sbjct: 1902 PNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILI 1961
Query: 343 --------------------------------------KVKVSLRDLIVSYYAQKNNMNR 408
KV+V+LRDLI+S YA+KNN+N
Sbjct: 1962 LRALHVNNEKAKMLLKPDKTIITEPHHIWPSLSDDQWMKVEVALRDLILSDYAKKNNVNT 2021
Query: 409 SALIQSGICDITLGADITPPS-QHHQLQEIEK 501
SAL QS I DI LGA+ITPPS Q Q+ EIEK
Sbjct: 2022 SALTQSEIRDIILGAEITPPSQQRQQIAEIEK 2053
Score = 51.2 bits (121), Expect(3) = 5e-66
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +3
Query: 498 KATKESSKLTAVTTKTTNVHGGELIVTTTSPFDNEQY 608
K E++++TAVTTKTTNVHG ELIVTTTSP++ +
Sbjct: 2053 KQAHEANQVTAVTTKTTNVHGEELIVTTTSPYEQAAF 2089
Score = 37.7 bits (86), Expect(3) = 5e-66
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 605 VSKTDWHEIGYTYIMLKKIFKKFICVA 685
V+ D E GYTYIM K I KKFIC+A
Sbjct: 2114 VNSEDIKETGYTYIMPKNILKKFICIA 2140
>ref|XP_003626843.1| Pre-mRNA splicing factor [Medicago truncatula]
gi|355520865|gb|AET01319.1| Pre-mRNA splicing factor
[Medicago truncatula]
Length = 2337
Score = 208 bits (530), Expect(3) = 9e-65
Identities = 117/212 (55%), Positives = 137/212 (64%), Gaps = 54/212 (25%)
Frame = +1
Query: 28 RYIHKSVWTGQKRLGQLAKWKTAEEVVALVQSLPIEEQPNQIIITCTGMVNPLEVHFLNF 207
+ IH SVW GQKRLGQLAKWKTAEEV ALV+SLP+EE+P QII+T GM++PLEVH L+F
Sbjct: 1821 KVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEEPKQIIVTRKGMLDPLEVHLLDF 1880
Query: 208 PNVFIKGSELQLPF*AWLKIEKFGDLTLKATEPQMLLFNLFDEWL--------------- 342
PN+ IKGSELQLPF A LKIEKFGDL LKATEPQM+LFN++D+WL
Sbjct: 1881 PNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILI 1940
Query: 343 --------------------------------------KVKVSLRDLIVSYYAQKNNMNR 408
KV+V+LRDLI+S YA+KNN+N
Sbjct: 1941 LRALHVNNEKAKMLLRPDITAVTEPHHIWPSLSDDQWMKVEVALRDLILSDYAKKNNVNT 2000
Query: 409 SALIQSGICDITLGADITPPS-QHHQLQEIEK 501
SAL QS I DI LGA+ITPPS Q Q+ EIEK
Sbjct: 2001 SALTQSEIRDIILGAEITPPSQQRQQIAEIEK 2032
Score = 48.1 bits (113), Expect(3) = 9e-65
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +3
Query: 498 KATKESSKLTAVTTKTTNVHGGELIVTTTSPFDNEQY 608
K +E++++TAVTT+TTNVHG LIVTTTSP++ +
Sbjct: 2032 KQAREANQVTAVTTQTTNVHGEGLIVTTTSPYEQAAF 2068
Score = 37.7 bits (86), Expect(3) = 9e-65
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 605 VSKTDWHEIGYTYIMLKKIFKKFICVA 685
V+ D E GYTYIM K I KKFIC+A
Sbjct: 2093 VNSEDIKETGYTYIMPKNILKKFICIA 2119