BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00011702
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...   127   2e-27
dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                        127   2e-27
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...   114   1e-23
gb|AAD32891.1|AC005489_29 F14N23.29 [Arabidopsis thaliana]            106   4e-21
ref|XP_004173129.1| PREDICTED: nuclear pore complex protein Nup9...    95   8e-18

>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score =  127 bits (318), Expect = 2e-27
 Identities = 90/222 (40%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
 Frame = -3

Query: 608 KPALGG------QSSPFGGSTFQQTQSAFGGNAF--SSPFGAPTQLSFGTSCIPGFGVTN 453
           KP  GG      Q++PFG ST QQ+Q AFG N F  SSPFGAP+Q +FG +  P FG T+
Sbjct: 116 KPLFGGFGSTPAQTNPFG-STNQQSQPAFGSNVFGSSSPFGAPSQSAFGATSTPAFGSTS 174

Query: 452 XXXXXXXXXXXXXXXTKSAFGSQXXXXXXXXXXXXXGSQXXXXXXXXXXXXXXXXXXXXX 273
                          +  AFG+              G+                      
Sbjct: 175 TPAFGATSTPAFGAASTPAFGATSTPAFGATSTPAFGAASTPAFGAAS------------ 222

Query: 272 XXXXXXXXXXXXXXSAPAFGSTSTPAFGSTSTPAFGSTSAASTTP---------FGAQP- 123
                           PAFG+TS+PAFGSTSTPAFGS   AS+TP         FGA   
Sbjct: 223 ---------------TPAFGATSSPAFGSTSTPAFGSGFGASSTPAFGASSAPAFGASST 267

Query: 122 --FSFGTTPAFGQTNSGFGSTPFGSTPSVFGAQSSSFGTQTT 3
             FSFG+TPAFGQ+ SGFGS+ FG+  S FGAQSS FG Q+T
Sbjct: 268 PSFSFGSTPAFGQSTSGFGSSTFGTNTSPFGAQSSPFGAQST 309



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
 Frame = -3

Query: 218 FGSTSTPAFGSTSTPAFGSTSAASTTPFGAQPF--SFGTTPA----FGQTNS----GFGS 69
           FGS+STPAFGS+S+ +FG +S      FG +P    FG+TPA    FG TN      FGS
Sbjct: 91  FGSSSTPAFGSSSSSSFGGSSI-----FGQKPLFGGFGSTPAQTNPFGSTNQQSQPAFGS 145

Query: 68  TPFGSTPSVFGAQS-SSFGTQTT 3
             FGS+ S FGA S S+FG  +T
Sbjct: 146 NVFGSS-SPFGAPSQSAFGATST 167


>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score =  127 bits (318), Expect = 2e-27
 Identities = 89/224 (39%), Positives = 110/224 (49%), Gaps = 22/224 (9%)
 Frame = -3

Query: 608 KPALGG------QSSPFGGSTFQQTQSAFGGNAF-SSPFG--------APTQLSFGTSCI 474
           KP+ GG      Q+SPFG STFQQ+Q AFG N F S+PFG        AP+  +FG+S  
Sbjct: 116 KPSFGGFGSSTTQTSPFG-STFQQSQPAFGSNLFGSTPFGGSSQSAFSAPSTPTFGSSST 174

Query: 473 PGFGVTNXXXXXXXXXXXXXXXTKSAFGSQXXXXXXXXXXXXXGSQXXXXXXXXXXXXXX 294
           P FG TN               +   FGS               S               
Sbjct: 175 PAFGATNTPAFGATSSPAFGSVSTPTFGSTGNAFGVSNAPVFGSS--------------- 219

Query: 293 XXXXXXXXXXXXXXXXXXXXXSAPAFGSTSTPAFGSTSTPAFGSTS-----AASTTPFGA 129
                                 +PAFG+ STPAFG+TS PAFG++S     A++T PFGA
Sbjct: 220 ----------------------SPAFGAASTPAFGATSAPAFGTSSSPSFGASTTPPFGA 257

Query: 128 QP--FSFGTTPAFGQTNSGFGSTPFGSTPSVFGAQSSSFGTQTT 3
               FSFG+TPAFGQ+ S FGST FG++PS FGA SS+FG QT+
Sbjct: 258 SSPSFSFGSTPAFGQSTSAFGSTQFGASPSPFGAPSSTFGAQTS 301


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Vitis vinifera]
          Length = 1013

 Score =  114 bits (285), Expect = 1e-23
 Identities = 85/213 (39%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
 Frame = -3

Query: 608 KPALGG------QSSPFGGSTFQQTQSAFGGNAF--SSPFGAPTQLSFGTSCIPGFGVTN 453
           KP  GG      Q+SPFG S FQQ+Q AFG + F  S+PFGA +Q +FG S  P F  T+
Sbjct: 115 KPGFGGFGSTPTQTSPFG-SAFQQSQPAFGSSLFGSSTPFGA-SQAAFGASSTPAFAATS 172

Query: 452 XXXXXXXXXXXXXXXTKSAFGSQXXXXXXXXXXXXXGSQXXXXXXXXXXXXXXXXXXXXX 273
                          + SAFGS              GS                      
Sbjct: 173 TPAFGATSTPAFGATSTSAFGSTPSPTFGSTGSAFGGS---------------------- 210

Query: 272 XXXXXXXXXXXXXXSAPAFGSTSTPAFGSTSTPAFGSTSAASTTPFGAQP---FSFGTTP 102
                         S P FGS++T AFG++STPAFG   A+ST  FGA     FSFG+TP
Sbjct: 211 GAPVFASSGAFGASSTPVFGSSTTSAFGTSSTPAFG---ASSTPAFGASSTPSFSFGSTP 267

Query: 101 AFGQTNSGFGSTPFGSTPSVFGAQSSSFGTQTT 3
           AFGQ+ + FGS+PFG+  S FGAQSS FG Q T
Sbjct: 268 AFGQSTAAFGSSPFGTATSPFGAQSSPFGAQAT 300



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 12/87 (13%)
 Frame = -3

Query: 227 APAFGSTSTPAFGSTSTPAFGSTSAA--STTPFGAQP--FSFGTTP--------AFGQTN 84
           +PAFGS S PAFG++STPAFGS+S++   ++ FG +P    FG+TP        AF Q+ 
Sbjct: 81  SPAFGS-SVPAFGASSTPAFGSSSSSFGGSSVFGQKPGFGGFGSTPTQTSPFGSAFQQSQ 139

Query: 83  SGFGSTPFGSTPSVFGAQSSSFGTQTT 3
             FGS+ FGS+ + FGA  ++FG  +T
Sbjct: 140 PAFGSSLFGSS-TPFGASQAAFGASST 165



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 25/97 (25%)
 Frame = -3

Query: 218 FGSTS--TPA-FGSTSTPAFGSTS------AASTTPFGAQPFSFGTTPA----------- 99
           FGSTS  TP+ FG++STP FG++S      A+S++ FG+ P  FG+TPA           
Sbjct: 453 FGSTSSATPSIFGASSTPPFGASSSPSLFGASSSSGFGSSPSIFGSTPAQGTAPAFGSGL 512

Query: 98  -FGQTNSG---FGSTP-FGSTPSVFGAQSSSFGTQTT 3
            FG T S      STP  G T S FG  +S+FG  TT
Sbjct: 513 NFGNTQSSPLFQSSTPSLGQTASAFGQSTSAFGQSTT 549


>gb|AAD32891.1|AC005489_29 F14N23.29 [Arabidopsis thaliana]
          Length = 1096

 Score =  106 bits (264), Expect = 4e-21
 Identities = 76/209 (36%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
 Frame = -3

Query: 590 QSSPFGGSTFQQTQSAFGGNAFSSP----------FGAPTQLSFGTSCIPGFGVTNXXXX 441
           QS+PFG ST QQ+Q AFG  +F S           FGAP+  SFG +  P FG ++    
Sbjct: 166 QSNPFGNST-QQSQPAFGNTSFGSSTPFGATNTPAFGAPSTPSFGATSTPSFGASSTPAF 224

Query: 440 XXXXXXXXXXXTKSAFGSQXXXXXXXXXXXXXGSQXXXXXXXXXXXXXXXXXXXXXXXXX 261
                         +FG+              GS                          
Sbjct: 225 GATNTPAFGASNSPSFGATNTPAFGASPTPAFGSTGTTFGNTGFGSGGAFGASNTPAFGA 284

Query: 260 XXXXXXXXXXSAPAFGSTSTPAFGSTSTPAFGSTSA-----ASTTPFGAQ---PFSFGTT 105
                       PAFG++STPAFG++STPAFG++S      +ST  FGA     FSFG++
Sbjct: 285 SGTPAFGASG-TPAFGASSTPAFGASSTPAFGASSTPAFGGSSTPSFGASNTSSFSFGSS 343

Query: 104 PAFGQTNSGFGSTPFGSTPSVFGAQSSSF 18
           PAFGQ+ S FGS+ FGSTPS FG Q SSF
Sbjct: 344 PAFGQSTSAFGSSAFGSTPSPFGGQGSSF 372



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
 Frame = -3

Query: 224 PAFGSTSTPAFGSTSTPAFGSTS-----AASTTPFGAQPFSFGTTPAFGQTNSGFGSTPF 60
           P+FG++STPAFG+T+TPAFG+++     A +T  FGA P     TPAFG T + FG+T F
Sbjct: 214 PSFGASSTPAFGATNTPAFGASNSPSFGATNTPAFGASP-----TPAFGSTGTTFGNTGF 268

Query: 59  GSTPSVFGAQSSSFGTQTT 3
           GS  +   + + +FG   T
Sbjct: 269 GSGGAFGASNTPAFGASGT 287



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 16/88 (18%)
 Frame = -3

Query: 218 FGSTSTPAFGSTSTPAFGSTS-----AASTTPFGA---QPFSFGTTPAFGQTNS-GFGST 66
           FG+T+TPAFG+ STP+FG+TS     A+ST  FGA     F    +P+FG TN+  FG++
Sbjct: 192 FGATNTPAFGAPSTPSFGATSTPSFGASSTPAFGATNTPAFGASNSPSFGATNTPAFGAS 251

Query: 65  P---FGSTPSVFG----AQSSSFGTQTT 3
           P   FGST + FG        +FG   T
Sbjct: 252 PTPAFGSTGTTFGNTGFGSGGAFGASNT 279



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 17/87 (19%)
 Frame = -3

Query: 224 PAFGSTS----TPAFGSTSTPAFGSTS-----AASTTPFGAQ---PFSFGTTPAFGQTNS 81
           PAFG+TS    TP FG+T+TPAFG+ S     A ST  FGA     F    TPAFG +NS
Sbjct: 179 PAFGNTSFGSSTP-FGATNTPAFGAPSTPSFGATSTPSFGASSTPAFGATNTPAFGASNS 237

Query: 80  -GFGST---PFGSTPS-VFGAQSSSFG 15
             FG+T    FG++P+  FG+  ++FG
Sbjct: 238 PSFGATNTPAFGASPTPAFGSTGTTFG 264


>ref|XP_004173129.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like, partial
           [Cucumis sativus]
          Length = 436

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 45/74 (60%), Positives = 57/74 (77%)
 Frame = -3

Query: 224 PAFGSTSTPAFGSTSTPAFGSTSAASTTPFGAQPFSFGTTPAFGQTNSGFGSTPFGSTPS 45
           PAFG++STPAFG++S PAFG++SA +        FSFG+TPAFGQ+ SGFGS+ FG+  S
Sbjct: 44  PAFGASSTPAFGASSAPAFGASSAPAFGASSTPSFSFGSTPAFGQSTSGFGSSTFGTNTS 103

Query: 44  VFGAQSSSFGTQTT 3
            FGAQSS FG Q+T
Sbjct: 104 PFGAQSSPFGAQST 117



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 10/67 (14%)
 Frame = -3

Query: 227 APAFGSTSTPAFGSTSTPAFG--------STSAASTTPFGAQ--PFSFGTTPAFGQTNSG 78
           APAFG++STP+F   STPAFG        ST   +T+PFGAQ  PF   +T +FG   SG
Sbjct: 67  APAFGASSTPSFSFGSTPAFGQSTSGFGSSTFGTNTSPFGAQSSPFGAQSTSSFG--TSG 124

Query: 77  FGSTPFG 57
           FG   FG
Sbjct: 125 FGQAGFG 131