BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00011563
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    83   1e-13
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    82   2e-13
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    82   2e-13
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    78   3e-12
gb|ABN07997.1| contains similarity to reverse trancriptase , rel...    75   2e-11

>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 22/147 (14%)
 Frame = +3

Query: 3   LALIPLYFVATCIIPQATLKKIDQLITCFRWGHSASQRKQHYISWAKFSREKSQGGLGLR 182
           L+ +P++ ++T ++PQ+ L ++DQL   F WG +A ++KQH + W+K    K +GGLG+R
Sbjct: 45  LSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVR 104

Query: 183 SSKDLNKARIAKLV*QL*YLRKHSYQLAITTTRH----------------SSSWKAM--- 305
           ++K +N+A I+K+  +L   +   + L +    H                SS+W+++   
Sbjct: 105 AAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIG 164

Query: 306 ---LFVKGCCWITGNGSHINLREDPWV 377
              +   G  WI G+G  I    D WV
Sbjct: 165 LRDVVSHGVGWIPGDGQQIRFWTDRWV 191


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 47/150 (31%), Positives = 86/150 (57%), Gaps = 22/150 (14%)
 Frame = +3

Query: 3   LALIPLYFVATCIIPQATLKKIDQLITCFRWGHSASQRKQHYISWAKFSREKSQGGLGLR 182
           L+ IP++ ++T  +P++TL  +D++   F WG S +QRKQH ISW +  + +S+GGLG+R
Sbjct: 322 LSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIR 381

Query: 183 SSKDLNKARIAKLV*QL*Y--------LRKHSYQL------AITTTRH--SSSWKAM--- 305
            ++D+NKA ++K+  +L          + + +Y++      A T  R   SS+W+++   
Sbjct: 382 KAQDMNKALLSKVGWRLIQDYHSLWARIMRCNYRVQDVRDGAWTKVRSVCSSTWRSVALG 441

Query: 306 ---LFVKGCCWITGNGSHINLREDPWVLSI 386
              + + G  W+ G+G  I    D W+ +I
Sbjct: 442 MREVVIPGLSWVIGDGREILFWMDKWLTNI 471


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 22/148 (14%)
 Frame = +3

Query: 3    LALIPLYFVATCIIPQATLKKIDQLITCFRWGHSASQRKQHYISWAKFSREKSQGGLGLR 182
            L+ IP++ ++  ++P +TL  +D+    F WG +  ++KQH +SW K  + K++GG+GLR
Sbjct: 660  LSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLR 719

Query: 183  SSKDLNKARIAKLV*QL*YLRKHSYQLAI----------------TTTRHSSSWKAM--- 305
            S++D+NKA +AK+  +L   ++  +   +                   R SS+W+++   
Sbjct: 720  SARDMNKALVAKVGWRLLQDKESLWARVVRKKYKVGGVQDTSWLKPQPRWSSTWRSVAVG 779

Query: 306  ---LFVKGCCWITGNGSHINLREDPWVL 380
               + VKG  W+ G+G  I    D W+L
Sbjct: 780  LREVVVKGVGWVPGDGCTIRFWLDRWLL 807


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 42/125 (33%), Positives = 76/125 (60%)
 Frame = +3

Query: 3   LALIPLYFVATCIIPQATLKKIDQLITCFRWGHSASQRKQHYISWAKFSREKSQGGLGLR 182
           L+LIP++ ++T  +PQ+TL+ +D+L   F  G SA ++K H ++W +    KS+GGLG+R
Sbjct: 474 LSLIPIHTMSTISLPQSTLEGLDKLARVFLLGSSAEKKKLHLVAWDRVCLPKSEGGLGIR 533

Query: 183 SSKDLNKARIAKLV*QL*YLRKHSYQLAITTTRHSSSWKAMLFVKGCCWITGNGSHINLR 362
           +SK +NKA ++K+  +L    ++S    I  +++    + ++  +G  W+ GNG  I   
Sbjct: 534 TSKCMNKALVSKVGWRL-INDRYSLWARILRSKYRVGLREVV-SRGSRWVVGNGRDILFW 591

Query: 363 EDPWV 377
            D W+
Sbjct: 592 SDNWL 596


>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
           truncatula]
          Length = 407

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
 Frame = +3

Query: 12  IPLYFVATCIIPQATLKKIDQLITCFRWGHSASQRKQHYISWAKFSREKSQGGLGLRSSK 191
           IP Y+++  ++P+    KI++ I  F WG +   +K H++S  K  R K  GGLG ++ +
Sbjct: 80  IPTYYMSCFMLPKGLCTKIEKAICSFWWGTTDKNKKMHWVSKKKLFRSKHSGGLGFKTLR 139

Query: 192 DLNKARIAKLV*QL*YLRKHSYQLAITTTRH---------------SSSWKAM-----LF 311
           D N A +AK V +  Y   +S         +               S +WK++     + 
Sbjct: 140 DFNLAMLAKKVRRF-YTNPNSLIAKCFKANYYPHTDILQAKVGNYPSYAWKSIQNAIWVI 198

Query: 312 VKGCCWITGNGSHINLREDPWVLSIHGFK 398
            KG CW  G+G  IN+ ED WV +  G K
Sbjct: 199 SKGSCWRIGDGGSINIWEDNWVPTYKGLK 227