BLASTX nr result

ID: Papaver22_contig00011547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00011547
         (1167 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like...   312   9e-83
emb|CBI39565.3| unnamed protein product [Vitis vinifera]              308   2e-81
ref|XP_003626171.1| DNA polymerase III polC-type [Medicago trunc...   278   2e-72
emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]   278   2e-72
ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|...   267   3e-69

>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
            vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED: DNA
            polymerase III polC-type-like isoform 1 [Vitis vinifera]
          Length = 337

 Score =  312 bits (800), Expect = 9e-83
 Identities = 176/347 (50%), Positives = 232/347 (66%), Gaps = 1/347 (0%)
 Frame = +2

Query: 5    MRAVSSCFAVLQGPKGRSLCILKENVFVQPTFVASIWSRNFHTFRALRNSVGKRFGFKLV 184
            MR V  CF++LQ P+ R   +            AS W  +FH+   L ++      FKL+
Sbjct: 1    MRTVPMCFSILQVPRCRIHTL------------ASFWRESFHS---LGSTCRSSSSFKLL 45

Query: 185  ASDACKASRDDPNTGRLKQRTVTTKTERTSNITRSSKSCVIRPSELGEETVTMGTKLNLY 364
             S       +  N+ R  +R +TTK+E  +  T+SSK   IR  E+ + TV+  TKL + 
Sbjct: 46   GSHT--NGLEGGNSRRWTRRPITTKSEGRNKYTQSSKRSNIR-HEIVDGTVSTSTKLIVD 102

Query: 365  NSEVIETKDIKHYDVQPKVEGSKKSERLVTIFVFDTETTGLHRENERIIEFALRDLSGGK 544
              E+ E++ I++ +VQ KV  +K   +LVT+ VFDTETTGL R N+RIIE  L+DL GG+
Sbjct: 103  KLEISESQRIQYCEVQEKVTENKDLAKLVTVIVFDTETTGLSRANDRIIEIGLQDLGGGE 162

Query: 545  DSTLQTLVNPERDILNDHIHGITTSMVNRPDVPRFSDLIPILQHYVKTRQIPGTPILWVG 724
            +ST QTLVNPER + N H+HGITT MVNRPDVPR+ DLIPIL  YV++RQ PG  ILWV 
Sbjct: 163  NSTFQTLVNPERIVPNPHVHGITTYMVNRPDVPRWKDLIPILLQYVESRQKPGGLILWVA 222

Query: 725  HNARVFDVPFLISEFSRCSMEIPSDWLFLDTLSLARDLMKLEGSKL-TGKSVQALREYYG 901
            HN R FDVPFLI+EFSRC+ E+P +W FLDTL LAR+L+K  GS L  G S+QALREYY 
Sbjct: 223  HNGRSFDVPFLINEFSRCNTEVPPNWRFLDTLPLARELIKSAGSDLPPGASLQALREYYR 282

Query: 902  IPWVGKAHTAMADVNMLSEILRHMTIDLQLPASALLERSFTASDIIN 1042
            IP VG AH  ++DV  LS++L+ +T +L++  + LL+RSFTASDIIN
Sbjct: 283  IPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVANLLDRSFTASDIIN 329


>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  308 bits (788), Expect = 2e-81
 Identities = 173/341 (50%), Positives = 229/341 (67%), Gaps = 1/341 (0%)
 Frame = +2

Query: 23   CFAVLQGPKGRSLCILKENVFVQPTFVASIWSRNFHTFRALRNSVGKRFGFKLVASDACK 202
            CF++LQ P+ R   +            AS W  +FH+   L ++      FKL+ S    
Sbjct: 2    CFSILQVPRCRIHTL------------ASFWRESFHS---LGSTCRSSSSFKLLGSHT-- 44

Query: 203  ASRDDPNTGRLKQRTVTTKTERTSNITRSSKSCVIRPSELGEETVTMGTKLNLYNSEVIE 382
               +  N+ R  +R +TTK+E  +  T+SSK   IR  E+ + TV+  TKL +   E+ E
Sbjct: 45   NGLEGGNSRRWTRRPITTKSEGRNKYTQSSKRSNIR-HEIVDGTVSTSTKLIVDKLEISE 103

Query: 383  TKDIKHYDVQPKVEGSKKSERLVTIFVFDTETTGLHRENERIIEFALRDLSGGKDSTLQT 562
            ++ I++ +VQ KV  +K   +LVT+ VFDTETTGL R N+RIIE  L+DL GG++ST QT
Sbjct: 104  SQRIQYCEVQEKVTENKDLAKLVTVIVFDTETTGLSRANDRIIEIGLQDLGGGENSTFQT 163

Query: 563  LVNPERDILNDHIHGITTSMVNRPDVPRFSDLIPILQHYVKTRQIPGTPILWVGHNARVF 742
            LVNPER + N H+HGITT MVNRPDVPR+ DLIPIL  YV++RQ PG  ILWV HN R F
Sbjct: 164  LVNPERIVPNPHVHGITTYMVNRPDVPRWKDLIPILLQYVESRQKPGGLILWVAHNGRSF 223

Query: 743  DVPFLISEFSRCSMEIPSDWLFLDTLSLARDLMKLEGSKL-TGKSVQALREYYGIPWVGK 919
            DVPFLI+EFSRC+ E+P +W FLDTL LAR+L+K  GS L  G S+QALREYY IP VG 
Sbjct: 224  DVPFLINEFSRCNTEVPPNWRFLDTLPLARELIKSAGSDLPPGASLQALREYYRIPLVGP 283

Query: 920  AHTAMADVNMLSEILRHMTIDLQLPASALLERSFTASDIIN 1042
            AH  ++DV  LS++L+ +T +L++  + LL+RSFTASDIIN
Sbjct: 284  AHRVLSDVYTLSQVLQMLTFNLKVSVANLLDRSFTASDIIN 324


>ref|XP_003626171.1| DNA polymerase III polC-type [Medicago truncatula]
            gi|355501186|gb|AES82389.1| DNA polymerase III polC-type
            [Medicago truncatula]
          Length = 332

 Score =  278 bits (711), Expect = 2e-72
 Identities = 143/270 (52%), Positives = 191/270 (70%), Gaps = 1/270 (0%)
 Frame = +2

Query: 239  QRTVTTKTERTSNI-TRSSKSCVIRPSELGEETVTMGTKLNLYNSEVIETKDIKHYDVQP 415
            +R +TT TE ++   +RS+K       E+  ET++  + +N+  +++ +  +I++ D+  
Sbjct: 62   RRPITTNTEGSAGTKSRSTKQ------EILSETISTSSTVNVKKTQLGQFPEIQYCDIHQ 115

Query: 416  KVEGSKKSERLVTIFVFDTETTGLHRENERIIEFALRDLSGGKDSTLQTLVNPERDILND 595
            ++  +K    LVT+ VFD ETTG  RENERIIE ALRDL GG +ST QT VNP+R + N 
Sbjct: 116  EIAQNKDLSSLVTVIVFDIETTGFSRENERIIEIALRDLQGGPNSTFQTFVNPQRSVYNS 175

Query: 596  HIHGITTSMVNRPDVPRFSDLIPILQHYVKTRQIPGTPILWVGHNARVFDVPFLISEFSR 775
            HIHGITT MV+RP VPR  DL+PIL HYVK+R+ P   +LWVGHNARVFDVPF+I+EF R
Sbjct: 176  HIHGITTQMVSRPGVPRMEDLVPILFHYVKSREKPRGYVLWVGHNARVFDVPFIINEFRR 235

Query: 776  CSMEIPSDWLFLDTLSLARDLMKLEGSKLTGKSVQALREYYGIPWVGKAHTAMADVNMLS 955
            CS +IP +WLF+DTL LAR LMK EG+KL   S+ +LR++Y I   G AH AM DVN LS
Sbjct: 236  CSTQIPPNWLFVDTLPLARQLMKSEGTKLPSVSLDSLRKFYEIKVDGPAHRAMEDVNTLS 295

Query: 956  EILRHMTIDLQLPASALLERSFTASDIINA 1045
             IL  +T DL+L  S L+E+SFT +DIIN+
Sbjct: 296  LILPKLTCDLKLTLSGLVEKSFTEADIINS 325


>emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]
          Length = 340

 Score =  278 bits (710), Expect = 2e-72
 Identities = 142/243 (58%), Positives = 184/243 (75%), Gaps = 1/243 (0%)
 Frame = +2

Query: 317  ELGEETVTMGTKLNLYNSEVIETKDIKHYDVQPKVEGSKKSERLVTIFVFDTETTGLHRE 496
            E+ + TV+  TKL +   E+ E++ I++ +VQ KV  +K   +LVT+ VFDTETTGL R 
Sbjct: 90   EIVDGTVSTSTKLIVDKLEISESQRIQYCEVQEKVTENKDLAKLVTVIVFDTETTGLSRA 149

Query: 497  NERIIEFALRDLSGGKDSTLQTLVNPERDILNDHIHGITTSMVNRPDVPRFSDLIPILQH 676
            N+RIIE  L+DL GG++ST QTLVNPER + N H+HGITT MVNRPDVPR+ DLIPIL  
Sbjct: 150  NDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPHVHGITTYMVNRPDVPRWKDLIPILLQ 209

Query: 677  YVKTRQIPGTPILWVGHNARVFDVPFLISEFSRCSMEIPSDWLFLDTLSLARDLMKLEGS 856
            YV++RQ PG  ILWV HN R FDVPFLI+EFSRC+ E+P +W F+DTL LAR+ +K  GS
Sbjct: 210  YVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFMDTLPLAREFIKSAGS 269

Query: 857  KL-TGKSVQALREYYGIPWVGKAHTAMADVNMLSEILRHMTIDLQLPASALLERSFTASD 1033
             L +G S+QALREY+ IP VG AH  ++DV  LS+IL+ +T +L++  + LL+RSFTASD
Sbjct: 270  DLPSGASLQALREYFRIPLVGPAHRVLSDVYTLSQILQMLTFNLKVSVANLLDRSFTASD 329

Query: 1034 IIN 1042
            IIN
Sbjct: 330  IIN 332


>ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|223548444|gb|EEF49935.1|
            exonuclease, putative [Ricinus communis]
          Length = 334

 Score =  267 bits (683), Expect = 3e-69
 Identities = 152/347 (43%), Positives = 221/347 (63%), Gaps = 1/347 (0%)
 Frame = +2

Query: 5    MRAVSSCFAVLQGPKGRSLCILKENVFVQPTFVASIWSRNFHTFRALRNSVGKRFGFKLV 184
            MR +  CF++LQ P+ R   I            A+ W  +FH+        G +  F+L+
Sbjct: 1    MRIIPMCFSILQVPRCRLHTI------------ANFWQESFHSSA---RKCGNKSSFRLL 45

Query: 185  ASDACKASRDDPNTGRLKQRTVTTKTERTSNITR-SSKSCVIRPSELGEETVTMGTKLNL 361
            AS +     +   + R  +R V+TKTE T+ IT+  SKS  IR  E+ +ETV+    L++
Sbjct: 46   ASKS--DGLEGGYSRRWIRRPVSTKTEGTNKITQYDSKSTNIR-HEILDETVSTSATLSI 102

Query: 362  YNSEVIETKDIKHYDVQPKVEGSKKSERLVTIFVFDTETTGLHRENERIIEFALRDLSGG 541
              +E+ E ++I++ D++ ++  +    +LVT+ VFD ETTG  RE ERIIE AL+DL GG
Sbjct: 103  SKTEISEYQNIRYCDIRREILENNDLAKLVTVIVFDLETTGFSREYERIIEIALQDLHGG 162

Query: 542  KDSTLQTLVNPERDILNDHIHGITTSMVNRPDVPRFSDLIPILQHYVKTRQIPGTPILWV 721
            ++ST QTL+NP R + N HIHGITT MV +P VPR  DLIPIL  Y+++RQ PG  +L V
Sbjct: 163  ENSTFQTLINPGRIVPNSHIHGITTHMVCKPHVPRMEDLIPILLQYIRSRQKPGGYVLLV 222

Query: 722  GHNARVFDVPFLISEFSRCSMEIPSDWLFLDTLSLARDLMKLEGSKLTGKSVQALREYYG 901
             HN R FDVPFLI+EF R  +++P +WLF+DTL LAR  MK +G K++  S+Q LRE +G
Sbjct: 223  AHNGRSFDVPFLINEFKRSGVDVPCNWLFMDTLPLARKWMKSKGLKIS-SSLQGLREAFG 281

Query: 902  IPWVGKAHTAMADVNMLSEILRHMTIDLQLPASALLERSFTASDIIN 1042
            I   G AH AM+DV +L+++ + +T +L+    +L+  SFTAS++IN
Sbjct: 282  IKLEGSAHRAMSDVRLLAKLFQMLTFNLKTTLPSLVAESFTASELIN 328


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