BLASTX nr result

ID: Papaver22_contig00011539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00011539
         (2092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...   209   2e-51
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   206   2e-50
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   205   3e-50
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   204   1e-49
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   203   2e-49

>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score =  209 bits (532), Expect = 2e-51
 Identities = 104/153 (67%), Positives = 126/153 (82%)
 Frame = +2

Query: 1595 VWDGEIDEPAPPPYVVLVQGPPNVGKSLLIKSLVKHFTMEHIMNDIQGPITIPTGDKRRV 1774
            V D   DEPAP  YVV+VQGPP VGKSLLIKSLVKH+T +H + D++GPITI +G +RRV
Sbjct: 80   VIDRSYDEPAP--YVVVVQGPPQVGKSLLIKSLVKHYT-KHNLPDVRGPITIVSGKQRRV 136

Query: 1775 QFVECPDDINGMIDAAKYADLVLLLVDASYGFEAETFEFFNLLRVHGLPKVMGVLTHLDQ 1954
            QFVECP+DINGMIDAAK+ADL LLL+D SYGFE ETFEF N+L+VHG PKVMGVLTHLD+
Sbjct: 137  QFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDK 196

Query: 1955 LEGEMELMETIERLQYHFWTEICEGATISYLSG 2053
             +   +L +T +RL++ FWTEI +GA + YLSG
Sbjct: 197  FKDAKKLRKTKQRLKHRFWTEIYDGAKLFYLSG 229


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  206 bits (525), Expect = 2e-50
 Identities = 99/143 (69%), Positives = 121/143 (84%)
 Frame = +2

Query: 1625 PPPYVVLVQGPPNVGKSLLIKSLVKHFTMEHIMNDIQGPITIPTGDKRRVQFVECPDDIN 1804
            P PYVV+VQGPP VGKSLLIKSLVKH+T +H + D++GPITI +G +RRVQFVECP+DIN
Sbjct: 86   PAPYVVVVQGPPQVGKSLLIKSLVKHYT-KHNLPDVRGPITIVSGKQRRVQFVECPNDIN 144

Query: 1805 GMIDAAKYADLVLLLVDASYGFEAETFEFFNLLRVHGLPKVMGVLTHLDQLEGEMELMET 1984
            GMIDAAK+ADL LLL+D SYGFE ETFEF N+L+VHG PKVMGVLTHLD+ +   +L +T
Sbjct: 145  GMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLRKT 204

Query: 1985 IERLQYHFWTEICEGATISYLSG 2053
             +RL++ FWTEI +GA + YLSG
Sbjct: 205  KQRLKHRFWTEIYDGAKLFYLSG 227


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  205 bits (522), Expect = 3e-50
 Identities = 97/143 (67%), Positives = 120/143 (83%)
 Frame = +2

Query: 1625 PPPYVVLVQGPPNVGKSLLIKSLVKHFTMEHIMNDIQGPITIPTGDKRRVQFVECPDDIN 1804
            PPP+VV+V GPP VGKSLLIK LVKH+T +H + +++GPITI +G KRRVQFVECP+DIN
Sbjct: 81   PPPFVVVVHGPPQVGKSLLIKCLVKHYT-KHNIQEVRGPITIVSGKKRRVQFVECPNDIN 139

Query: 1805 GMIDAAKYADLVLLLVDASYGFEAETFEFFNLLRVHGLPKVMGVLTHLDQLEGEMELMET 1984
            GMIDAAK+ADL LLL+D SYGFE ETFEF N+L+VHG PK+MGVLTHLDQ +   +L +T
Sbjct: 140  GMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKIMGVLTHLDQFKDVKKLKKT 199

Query: 1985 IERLQYHFWTEICEGATISYLSG 2053
             +RL++ FWTEI +GA + YLSG
Sbjct: 200  KQRLKHRFWTEIYDGAKLFYLSG 222


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
            gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
            bms1, putative [Ricinus communis]
          Length = 825

 Score =  204 bits (518), Expect = 1e-49
 Identities = 98/143 (68%), Positives = 120/143 (83%)
 Frame = +2

Query: 1625 PPPYVVLVQGPPNVGKSLLIKSLVKHFTMEHIMNDIQGPITIPTGDKRRVQFVECPDDIN 1804
            P PYVVLV GPP VGKSLLIKSLVKH+T +H + +++GPITI +G +RRVQFVECP+DIN
Sbjct: 84   PAPYVVLVHGPPQVGKSLLIKSLVKHYT-KHNLPEVRGPITIVSGKQRRVQFVECPNDIN 142

Query: 1805 GMIDAAKYADLVLLLVDASYGFEAETFEFFNLLRVHGLPKVMGVLTHLDQLEGEMELMET 1984
            GMIDAAK+ADL LLL+D SYGFE ETFEF N+L+VHG PKVMGVLTHLD+ +   +L +T
Sbjct: 143  GMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKT 202

Query: 1985 IERLQYHFWTEICEGATISYLSG 2053
             +RL++ FWTEI +GA + YLSG
Sbjct: 203  KQRLKHRFWTEIYDGAKLFYLSG 225


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  203 bits (516), Expect = 2e-49
 Identities = 95/143 (66%), Positives = 121/143 (84%)
 Frame = +2

Query: 1625 PPPYVVLVQGPPNVGKSLLIKSLVKHFTMEHIMNDIQGPITIPTGDKRRVQFVECPDDIN 1804
            PPP+V++VQGPP VGKSLLIKSL+KH+T +++  +++GPITI +G +RR+QFVECP+DIN
Sbjct: 81   PPPFVIVVQGPPQVGKSLLIKSLIKHYTKQNLP-EVRGPITIVSGKQRRLQFVECPNDIN 139

Query: 1805 GMIDAAKYADLVLLLVDASYGFEAETFEFFNLLRVHGLPKVMGVLTHLDQLEGEMELMET 1984
            GMIDAAKYADL LLL+D SYGFE ETFEF N+L+VHG PKVMGVLTHLD  +   +L +T
Sbjct: 140  GMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKT 199

Query: 1985 IERLQYHFWTEICEGATISYLSG 2053
             +RL++ FWTEI +GA + YLSG
Sbjct: 200  KQRLKHRFWTEIYDGAKLFYLSG 222


Top