BLASTX nr result

ID: Papaver22_contig00011342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00011342
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor...   508   e-141
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   508   e-141
dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare]    503   e-140
gb|AFW61762.1| putative RNA helicase family protein [Zea mays]        499   e-139
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...   499   e-139

>ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Brachypodium distachyon]
          Length = 1051

 Score =  508 bits (1307), Expect = e-141
 Identities = 244/276 (88%), Positives = 267/276 (96%)
 Frame = +1

Query: 1    VVLTLKSLGIHDLLNFDFMDPPPTEALLKALESLFALNALNSVGELTKVGRRMAEFPLDP 180
            VVLTLKSLGIHDL+NFDFMDPPP+EALLKALE LFAL+ALNS GELTK GRRMAEFPLDP
Sbjct: 774  VVLTLKSLGIHDLVNFDFMDPPPSEALLKALEQLFALSALNSRGELTKTGRRMAEFPLDP 833

Query: 181  MLSKMIVASEKYKCSEEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 360
            MLSKMIVASEKYKCS+EVISIA+MLSIGNSIFYRPKDKQVHADNAR+NFHTGNVGDHIAL
Sbjct: 834  MLSKMIVASEKYKCSDEVISIASMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDHIAL 893

Query: 361  LKVYSSWKETNFSTQWCYENYIQVKSMKRARDIRDQLEGLLERVEIELTSESNDLDPVKK 540
            L VY+SWKET+FSTQWCYENYIQV+SMKRARDIRDQLEGLLERVEIE+ S ++DLD +KK
Sbjct: 894  LNVYNSWKETDFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVCSNASDLDAIKK 953

Query: 541  AITSGFFHHTAKLQKNGAYRTVKNPQTVHIHPSSGLAQLLPRWVIYHELVMTTKEYMRQV 720
            AITSGFFHH+A+LQKNG+YRTVKNPQTV +HPSSGLAQLLPRWVIYHELV+TTKEYMRQV
Sbjct: 954  AITSGFFHHSARLQKNGSYRTVKNPQTVFVHPSSGLAQLLPRWVIYHELVLTTKEYMRQV 1013

Query: 721  TELKPEWLVEIAPHYYQLKDVEDVGTKKMPRGEGRA 828
            TELKPEWLVEIAPHYYQLKDV+D G+KK+P+G+GRA
Sbjct: 1014 TELKPEWLVEIAPHYYQLKDVDDSGSKKLPKGQGRA 1049


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  508 bits (1307), Expect = e-141
 Identities = 244/279 (87%), Positives = 267/279 (95%)
 Frame = +1

Query: 1    VVLTLKSLGIHDLLNFDFMDPPPTEALLKALESLFALNALNSVGELTKVGRRMAEFPLDP 180
            VVL+LKSLGIHDLLNFDFMDPPP EALLKALE L+AL+ALN +GELTKVGRRMAEFPLDP
Sbjct: 778  VVLSLKSLGIHDLLNFDFMDPPPAEALLKALELLYALSALNRLGELTKVGRRMAEFPLDP 837

Query: 181  MLSKMIVASEKYKCSEEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 360
            MLSKMIVA++ YKCS+E+ISIAAMLS+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL
Sbjct: 838  MLSKMIVAADNYKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 897

Query: 361  LKVYSSWKETNFSTQWCYENYIQVKSMKRARDIRDQLEGLLERVEIELTSESNDLDPVKK 540
            LKVYSSWKETN+STQWCYENYIQV+SMKRARD+RDQLEGLLERVEIEL S  NDLD +KK
Sbjct: 898  LKVYSSWKETNYSTQWCYENYIQVRSMKRARDVRDQLEGLLERVEIELASNPNDLDAIKK 957

Query: 541  AITSGFFHHTAKLQKNGAYRTVKNPQTVHIHPSSGLAQLLPRWVIYHELVMTTKEYMRQV 720
            +IT+GFF H+A+LQKNG+YRTVK+PQTVHIHPSSGLAQ+LPRWVIYHELV+TTKEYMRQV
Sbjct: 958  SITAGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVIYHELVLTTKEYMRQV 1017

Query: 721  TELKPEWLVEIAPHYYQLKDVEDVGTKKMPRGEGRAEKD 837
            TELKPEWLVEIAPH+YQLKDVED G+KKMPR EGRA KD
Sbjct: 1018 TELKPEWLVEIAPHFYQLKDVEDPGSKKMPRTEGRAVKD 1056


>dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1046

 Score =  503 bits (1296), Expect = e-140
 Identities = 241/276 (87%), Positives = 266/276 (96%)
 Frame = +1

Query: 1    VVLTLKSLGIHDLLNFDFMDPPPTEALLKALESLFALNALNSVGELTKVGRRMAEFPLDP 180
            VVLTLKSLGIHDL+NFDFMDPPP+EALLKALE LFAL+ALNS GELTK GRRMAEFPLDP
Sbjct: 769  VVLTLKSLGIHDLVNFDFMDPPPSEALLKALEQLFALSALNSRGELTKTGRRMAEFPLDP 828

Query: 181  MLSKMIVASEKYKCSEEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 360
            MLSKMIVASEKYKCS+EV+SIA+MLSIGNSIFYRPKDKQVHADNAR+NFHTGNVGDHIAL
Sbjct: 829  MLSKMIVASEKYKCSDEVMSIASMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDHIAL 888

Query: 361  LKVYSSWKETNFSTQWCYENYIQVKSMKRARDIRDQLEGLLERVEIELTSESNDLDPVKK 540
            L VY+SW+ET+FSTQWCYENYIQV+SMKRARDIRDQLEGL+ERVEIE+ S ++DLD +KK
Sbjct: 889  LNVYNSWRETDFSTQWCYENYIQVRSMKRARDIRDQLEGLMERVEIEVCSNASDLDAIKK 948

Query: 541  AITSGFFHHTAKLQKNGAYRTVKNPQTVHIHPSSGLAQLLPRWVIYHELVMTTKEYMRQV 720
            AITSGFFHH+A+LQKNG+YRTVKNPQTV IHPSSGLAQLLPRWVIYHELV+TTKEYMRQV
Sbjct: 949  AITSGFFHHSARLQKNGSYRTVKNPQTVFIHPSSGLAQLLPRWVIYHELVLTTKEYMRQV 1008

Query: 721  TELKPEWLVEIAPHYYQLKDVEDVGTKKMPRGEGRA 828
            TELKPEWLVEIAPHYYQLKDV+D  +KK+P+G+GRA
Sbjct: 1009 TELKPEWLVEIAPHYYQLKDVDDAASKKLPKGQGRA 1044


>gb|AFW61762.1| putative RNA helicase family protein [Zea mays]
          Length = 639

 Score =  499 bits (1284), Expect = e-139
 Identities = 235/276 (85%), Positives = 266/276 (96%)
 Frame = +1

Query: 1    VVLTLKSLGIHDLLNFDFMDPPPTEALLKALESLFALNALNSVGELTKVGRRMAEFPLDP 180
            VVLTLKSLGIHDL+NFDFMDPPP+EALL+ALE LFAL+ALNS GELTK GRRMAEFPLDP
Sbjct: 362  VVLTLKSLGIHDLVNFDFMDPPPSEALLRALEQLFALSALNSRGELTKTGRRMAEFPLDP 421

Query: 181  MLSKMIVASEKYKCSEEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 360
            MLSKMIVASEKYKCS+E+ISIA+MLSIGNSIFYRPKDKQVHADNAR+NFHTGNVGDHIAL
Sbjct: 422  MLSKMIVASEKYKCSDEIISIASMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDHIAL 481

Query: 361  LKVYSSWKETNFSTQWCYENYIQVKSMKRARDIRDQLEGLLERVEIELTSESNDLDPVKK 540
            L VY+SWKET++STQWCYENYIQV+SMKRARDIRDQL+GL+ERVEIE+ S ++DLD +KK
Sbjct: 482  LNVYNSWKETDYSTQWCYENYIQVRSMKRARDIRDQLDGLMERVEIEICSNTSDLDAIKK 541

Query: 541  AITSGFFHHTAKLQKNGAYRTVKNPQTVHIHPSSGLAQLLPRWVIYHELVMTTKEYMRQV 720
            AITSGFFHH+A+LQ++G Y+TVKNPQTVHIHPSSGLA++ PRWV+YHELV+TTKE+MRQV
Sbjct: 542  AITSGFFHHSARLQRDGTYKTVKNPQTVHIHPSSGLAEVRPRWVVYHELVLTTKEFMRQV 601

Query: 721  TELKPEWLVEIAPHYYQLKDVEDVGTKKMPRGEGRA 828
            TELKPEWLVEIAPHYYQLKDVED GTKK+P+G+GRA
Sbjct: 602  TELKPEWLVEIAPHYYQLKDVEDSGTKKLPKGQGRA 637


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score =  499 bits (1284), Expect = e-139
 Identities = 240/274 (87%), Positives = 262/274 (95%)
 Frame = +1

Query: 1    VVLTLKSLGIHDLLNFDFMDPPPTEALLKALESLFALNALNSVGELTKVGRRMAEFPLDP 180
            VVLTLKSLGIHDLLNFDFMDPPP EALLKALE LFAL+ALN +GELTKVGRRMAEFPLDP
Sbjct: 759  VVLTLKSLGIHDLLNFDFMDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPLDP 818

Query: 181  MLSKMIVASEKYKCSEEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 360
            MLSKMIVASE YKCS+++ISIAAMLS+GNSIFYRPKDKQVHADNAR+NFHTGNVGDH+AL
Sbjct: 819  MLSKMIVASENYKCSDDIISIAAMLSVGNSIFYRPKDKQVHADNARLNFHTGNVGDHMAL 878

Query: 361  LKVYSSWKETNFSTQWCYENYIQVKSMKRARDIRDQLEGLLERVEIELTSESNDLDPVKK 540
            LKVY+SWKETN+STQWCYENYIQV+SMKRARDIRDQL GLLERVEIELTS +NDLD +KK
Sbjct: 879  LKVYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTSNANDLDAIKK 938

Query: 541  AITSGFFHHTAKLQKNGAYRTVKNPQTVHIHPSSGLAQLLPRWVIYHELVMTTKEYMRQV 720
            +ITSGFF H+A+LQKNG+YRTVK+ QTVHIHPSSGLAQ+LPRWV+YHELV+TTKEYMRQV
Sbjct: 939  SITSGFFPHSARLQKNGSYRTVKHSQTVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQV 998

Query: 721  TELKPEWLVEIAPHYYQLKDVEDVGTKKMPRGEG 822
            TELKPEWLVEIAPHYYQLKDVED  +KKMPRG G
Sbjct: 999  TELKPEWLVEIAPHYYQLKDVEDSYSKKMPRGAG 1032


Top