BLASTX nr result

ID: Papaver22_contig00011319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00011319
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    73   5e-11
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    67   3e-09
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    67   4e-09
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...    65   1e-08
ref|XP_002532278.1| conserved hypothetical protein [Ricinus comm...    64   2e-08

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
 Frame = -1

Query: 693 GYSSSTNEYKFVSIC-----KSREDLNVRI------VRVYTLGS-GWRTVGKMDKNMEQV 550
           G++  TNEYK + I        R   + RI      V++ TLG  GWR++GK+   +  V
Sbjct: 171 GFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRL--V 228

Query: 549 RECTGAFANGALHWVDE------SGTVLSFSLTDEKFSEIPPPPPSLTRDAVPYSSLVLK 388
           R  +    NG LHWV        +  ++SF LTDE+F E+P P        +      L 
Sbjct: 229 RRASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCG----GLNRCDYHLA 284

Query: 387 ALGGFLGVVVFYDLDRVEIWLLKKNKDNYDLSWSKEFSFNSHI 259
            L G L V V+ +  R+EIW++K+   N   SW KE++  +++
Sbjct: 285 VLRGCLSVAVYCNYGRLEIWVMKEY--NVKESWVKEYNIGAYM 325


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
 Frame = -1

Query: 693 GYSSSTNEYKFVSICKSREDLN-----------VRIVRVYTLGSG-WRTVGKMDKNMEQV 550
           G++  T EYK + I   R               +  V++ TLG   WR++GK+   +  V
Sbjct: 172 GFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRL--V 229

Query: 549 RECTGAFANGALHWVDE------SGTVLSFSLTDEKFSEIPPPP-PSLTRDAVPYSSLVL 391
           R  +GA  NG LHW+        +  ++SF LTDE+F E+  P    L R    Y  +VL
Sbjct: 230 RRASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNR--CNYHLVVL 287

Query: 390 KALGGFLGVVVFYDLDRVEIWLLKKNKDNYDLSWSKEFSFNSHI 259
           +   G L   V+ +  R+EIW++K+   N   SW KE++  +++
Sbjct: 288 R---GCLSAAVYCNYGRLEIWVMKEY--NVKESWVKEYNIGAYM 326


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
 Frame = -1

Query: 693 GYSSSTNEYKFVSICKSREDLNV-----RI------VRVYTLGSG-WRTVGKMDKNMEQV 550
           GY   T  YK V +   R          RI      V+V TLGS  WR++GK+   ++  
Sbjct: 172 GYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLD-- 229

Query: 549 RECTGAFANGALHWVDE-----SGTVLSFSLTDEKFSEIPPPPPSLTRDAVPYSSLVLKA 385
           R  + A  NG LHWV       +  ++SF L DE+F EIP P        +   +  L  
Sbjct: 230 RWPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDCG----GLSRCNYHLLV 285

Query: 384 LGGFLGVVVFYDLDRVEIWLLKKNKDNYDL--SWSKEFSFNSHI 259
           LGG L   V     ++E+W++K+    YD+  SW KEF+  +H+
Sbjct: 286 LGGCLSAAVHRSNGKLEVWVMKE----YDVKESWIKEFNIGAHL 325


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
           gi|449519392|ref|XP_004166719.1| PREDICTED: F-box
           protein At3g07870-like [Cucumis sativus]
          Length = 375

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
 Frame = -1

Query: 693 GYSSSTNEYKFVSICKSREDLNVRI------VRVYTLG-SGWRTVGKMDKNMEQVRECTG 535
           G+   T   K + I  S+    ++       V+V+TLG S WR++G++  ++ Q +  + 
Sbjct: 142 GFHPQTKRLKILKIVYSKGFRRIQRRFHHSEVQVFTLGTSNWRSIGRIFHHLAQGQ--SP 199

Query: 534 AFANGALHWVD------ESGTVLSFSLTDEKFSEIPPPP-PSLTRDAVPYSSLVLKALGG 376
           A  NG LHWV          T++SF L  E+F +IP P   SL+R      +  L  L  
Sbjct: 200 AAINGRLHWVSLPRRHYVGRTIVSFDLASEEFIDIPKPDYGSLSR-----CNFQLMNLND 254

Query: 375 FLGVVVFYDLDRVEIWLLKKNKDNYDLSWSKEFSFNSHISSPFGFTKSGRLLCYVDKKI 199
            L  VV+    ++EIW++++       SW K F+  S++  P G  + G  +C+   KI
Sbjct: 255 CLSAVVYCSYGKMEIWVMEQY--GVKESWVKSFNIGSYM--PKGLKQEGTEMCFKVSKI 309


>ref|XP_002532278.1| conserved hypothetical protein [Ricinus communis]
           gi|223528012|gb|EEF30093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 21/166 (12%)
 Frame = -1

Query: 693 GYSSSTNEYKFVSI-------------CKSREDLNVRIVRVYTLGS-GWRTVGKMDKNME 556
           G+   T EYK V I                R+      V++ T+GS  WR++GKM   + 
Sbjct: 23  GFHPKTQEYKVVKIVYYRNGHSGGYPRATRRQFYPQSEVQILTVGSCEWRSLGKMSYQL- 81

Query: 555 QVRECTGAFANGALHWVDE------SGTVLSFSLTDEKFSEIPPPP-PSLTRDAVPYSSL 397
            VR  + A  NG LHWV        +  ++S  L DE+F E+P P    L+R    Y  +
Sbjct: 82  -VRRQSEALVNGRLHWVSRPRRYNPARRLVSLDLVDEQFREVPKPDCGGLSR--CNYHLV 138

Query: 396 VLKALGGFLGVVVFYDLDRVEIWLLKKNKDNYDLSWSKEFSFNSHI 259
           VLK   G L   V+ +  R+EIW +K+   N   SW K++   +H+
Sbjct: 139 VLK---GCLSAAVYCNYGRLEIWTMKEY--NVKESWVKQYIVGTHM 179


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