BLASTX nr result

ID: Papaver22_contig00011275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00011275
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   276   4e-72
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              276   4e-72
gb|AFK34627.1| unknown [Medicago truncatula]                          272   6e-71
ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana] gi|...   271   8e-71
ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|2...   268   7e-70

>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  276 bits (705), Expect = 4e-72
 Identities = 134/220 (60%), Positives = 165/220 (75%)
 Frame = -3

Query: 694 LQLTVSLEILSNSEMDDQIVDEDDTHSCVVNIYPLRGYYFGSKDAVHPKHHTYFDQLQKL 515
           L L   +     S  D       D+ + V++IYPL  YYFGSKD +  K  T  D++ ++
Sbjct: 62  LSLIFRMNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRM 121

Query: 514 KSNYSTNGMRVCVEAVMLVELFKQPHLLVLQMRNSFFKLPGGRLRPGESEMEGLKRKLSN 335
           KSNYS  G R CV AV+LVELFK PHLL+LQ++NSFFKLPGGRLRPGESE+ GLKRKLS 
Sbjct: 122 KSNYSRYGSRTCVVAVILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSR 181

Query: 334 KLSYNGNGVDNNWEVGECLGTWWRPDFETSLCPFLPPHVKSPKECLKLFLVKLPMNKSFI 155
           KLS N +G  ++WEVGECLG WWRPDFET L P+LPP+VK+PKEC KLFLVKLP ++ FI
Sbjct: 182 KLSVNEDGDGSDWEVGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFI 241

Query: 154 VPKNQKLLVVPIFQVHDNFKTYGQIVSEVPSLLSRFSFNM 35
           VPKN KLL +P+ Q+H+N KTYG I++ VP LLS+FSFN+
Sbjct: 242 VPKNLKLLAIPLCQLHENDKTYGPIIAGVPQLLSKFSFNI 281


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  276 bits (705), Expect = 4e-72
 Identities = 134/220 (60%), Positives = 165/220 (75%)
 Frame = -3

Query: 694 LQLTVSLEILSNSEMDDQIVDEDDTHSCVVNIYPLRGYYFGSKDAVHPKHHTYFDQLQKL 515
           L L   +     S  D       D+ + V++IYPL  YYFGSKD +  K  T  D++ ++
Sbjct: 69  LSLIFRMNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRM 128

Query: 514 KSNYSTNGMRVCVEAVMLVELFKQPHLLVLQMRNSFFKLPGGRLRPGESEMEGLKRKLSN 335
           KSNYS  G R CV AV+LVELFK PHLL+LQ++NSFFKLPGGRLRPGESE+ GLKRKLS 
Sbjct: 129 KSNYSRYGSRTCVVAVILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSR 188

Query: 334 KLSYNGNGVDNNWEVGECLGTWWRPDFETSLCPFLPPHVKSPKECLKLFLVKLPMNKSFI 155
           KLS N +G  ++WEVGECLG WWRPDFET L P+LPP+VK+PKEC KLFLVKLP ++ FI
Sbjct: 189 KLSVNEDGDGSDWEVGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFI 248

Query: 154 VPKNQKLLVVPIFQVHDNFKTYGQIVSEVPSLLSRFSFNM 35
           VPKN KLL +P+ Q+H+N KTYG I++ VP LLS+FSFN+
Sbjct: 249 VPKNLKLLAIPLCQLHENDKTYGPIIAGVPQLLSKFSFNI 288


>gb|AFK34627.1| unknown [Medicago truncatula]
          Length = 205

 Score =  272 bits (695), Expect = 6e-71
 Identities = 134/206 (65%), Positives = 158/206 (76%), Gaps = 1/206 (0%)
 Frame = -3

Query: 649 DDQIVDEDDTHSCVVNIYPLRGYYFGSK-DAVHPKHHTYFDQLQKLKSNYSTNGMRVCVE 473
           ++ I D+DD     VNIYPL  YYFGSK DA+  K H+    LQ+ KSNY   GMR CVE
Sbjct: 3   ENGIRDDDDDEKVEVNIYPLNSYYFGSKEDAIPSKDHS----LQRFKSNYDARGMRTCVE 58

Query: 472 AVMLVELFKQPHLLVLQMRNSFFKLPGGRLRPGESEMEGLKRKLSNKLSYNGNGVDNNWE 293
           AVM+VELFK PHLL+ Q++NS FKLPGGRLRPGES+ +GLKRKL+ KLS + N  +  WE
Sbjct: 59  AVMMVELFKHPHLLLFQIKNSIFKLPGGRLRPGESDTDGLKRKLARKLSADENLAE--WE 116

Query: 292 VGECLGTWWRPDFETSLCPFLPPHVKSPKECLKLFLVKLPMNKSFIVPKNQKLLVVPIFQ 113
           VGECLG WWRPDFETS+ PFLPP+VK PKEC KLFLV+LP ++ F VPKN KLL VP+ Q
Sbjct: 117 VGECLGMWWRPDFETSMYPFLPPNVKHPKECTKLFLVRLPESRRFTVPKNMKLLSVPLCQ 176

Query: 112 VHDNFKTYGQIVSEVPSLLSRFSFNM 35
           + DN KTYG I+S VP LLS+FSFNM
Sbjct: 177 IRDNHKTYGPIISAVPQLLSKFSFNM 202


>ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
           gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60
           [Arabidopsis thaliana] gi|20147173|gb|AAM10303.1|
           AT4g29820/F27B13_60 [Arabidopsis thaliana]
           gi|21554114|gb|AAM63194.1| mRNA cleavage factor
           subunit-like protein [Arabidopsis thaliana]
           gi|332660282|gb|AEE85682.1| CFIM-25-like protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  271 bits (694), Expect = 8e-71
 Identities = 127/212 (59%), Positives = 166/212 (78%), Gaps = 1/212 (0%)
 Frame = -3

Query: 667 LSNSEMDDQIVDEDDT-HSCVVNIYPLRGYYFGSKDAVHPKHHTYFDQLQKLKSNYSTNG 491
           L   E+ D     +D  H  +V++YPL  YYFGSK+A+  K     D++ +LKSNY+ +G
Sbjct: 8   LDMEEISDNTTRRNDVVHDLMVDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHG 67

Query: 490 MRVCVEAVMLVELFKQPHLLVLQMRNSFFKLPGGRLRPGESEMEGLKRKLSNKLSYNGNG 311
           +R CVEAV+LVELFK PH+L+LQ RNS FKLPGGRLRPGES++EGLKRKL++KLS N N 
Sbjct: 68  LRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENV 127

Query: 310 VDNNWEVGECLGTWWRPDFETSLCPFLPPHVKSPKECLKLFLVKLPMNKSFIVPKNQKLL 131
             + +EVGEC+G WWRP+FET + PFLPP++K PKEC KLFLV+LP+++ F+VPKN KLL
Sbjct: 128 GVSGYEVGECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLL 187

Query: 130 VVPIFQVHDNFKTYGQIVSEVPSLLSRFSFNM 35
            VP+ Q+H+N KTYG I+S++P LLS+FSFNM
Sbjct: 188 AVPLCQLHENEKTYGPIMSQIPKLLSKFSFNM 219


>ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|222854251|gb|EEE91798.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  268 bits (686), Expect = 7e-70
 Identities = 125/203 (61%), Positives = 161/203 (79%)
 Frame = -3

Query: 640 IVDEDDTHSCVVNIYPLRGYYFGSKDAVHPKHHTYFDQLQKLKSNYSTNGMRVCVEAVML 461
           + D ++  S V+ IYPL  YYFGSKD +  +  T  D++Q++KSN+S  G+R  V+AVML
Sbjct: 8   VTDNNNHQSTVIEIYPLGSYYFGSKDPIAFRDETIADRVQRMKSNFSARGLRTSVQAVML 67

Query: 460 VELFKQPHLLVLQMRNSFFKLPGGRLRPGESEMEGLKRKLSNKLSYNGNGVDNNWEVGEC 281
           VELFK PHLL+LQ+RN+FFKLPGGRLRPGES+++GL+RKLS  LS N +  D+ WEVG+C
Sbjct: 68  VELFKHPHLLLLQVRNAFFKLPGGRLRPGESDIDGLQRKLSRMLSVNEDETDH-WEVGDC 126

Query: 280 LGTWWRPDFETSLCPFLPPHVKSPKECLKLFLVKLPMNKSFIVPKNQKLLVVPIFQVHDN 101
           LG WWR DFET L P+LPP++K PKEC KL++VKLP ++ FIVPKN KLL VP+ QVH+N
Sbjct: 127 LGMWWRSDFETLLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHEN 186

Query: 100 FKTYGQIVSEVPSLLSRFSFNMN 32
            KTYG ++S VP LLS+FSFN+N
Sbjct: 187 HKTYGPVISGVPQLLSKFSFNIN 209


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