BLASTX nr result

ID: Papaver22_contig00011200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00011200
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata sub...    95   7e-18
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...    94   9e-18
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...    94   9e-18
ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arab...    85   5e-15
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    84   2e-14

>ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328297|gb|EFH58716.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 9/136 (6%)
 Frame = +1

Query: 130 LLGSSNGLVYIDPVTSDDNMSIWNPATGEYKRLPVYL---------DSLDSVAHGFGFDC 282
           ++GSSNGLV I P   +  + ++NP TG+ KRLP  L         D+  +  +GFGFD 
Sbjct: 165 IVGSSNGLVCISP--GEGAVILYNPTTGDSKRLPETLRPKSVEYGRDNFQT--YGFGFDD 220

Query: 283 KNDDYKVVRISCTHPSGKVLDAGVYSLASNSWKNLGIVPYDHFPHGTNIGVLLNGVIHWI 462
             DDYKVV++  T  S  +LDA VYSL ++SW+ +  + Y+H       GV  NG IHW+
Sbjct: 221 LTDDYKVVKLVAT--SDDILDASVYSLKADSWRRICNLNYEHNDGFYTSGVHFNGAIHWV 278

Query: 463 ATGIGSSVRVLVCFDV 510
              I    RV+V FD+
Sbjct: 279 FAEISHGQRVVVAFDI 294


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
           gi|21536665|gb|AAM60997.1| unknown [Arabidopsis
           thaliana]
          Length = 416

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 7/134 (5%)
 Frame = +1

Query: 130 LLGSSNGLVYIDPVTSDDNMSIWNPATGEYKRLP-------VYLDSLDSVAHGFGFDCKN 288
           ++GSSNGLV I P   +  + ++NP TG+ KRLP       V  +  +   +GFGFD   
Sbjct: 154 IVGSSNGLVCISP--GEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDGLT 211

Query: 289 DDYKVVRISCTHPSGKVLDAGVYSLASNSWKNLGIVPYDHFPHGTNIGVLLNGVIHWIAT 468
           DDYK+V++  T  S  +LDA VYSL ++SW+ +  + Y+H       GV  NG IHW+ T
Sbjct: 212 DDYKLVKLVAT--SEDILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHWVFT 269

Query: 469 GIGSSVRVLVCFDV 510
               + RV+V FD+
Sbjct: 270 ESRHNQRVVVAFDI 283


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g06240
           gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
           thaliana] gi|29824145|gb|AAP04033.1| putative F-box
           protein family [Arabidopsis thaliana]
           gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 427

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 7/134 (5%)
 Frame = +1

Query: 130 LLGSSNGLVYIDPVTSDDNMSIWNPATGEYKRLP-------VYLDSLDSVAHGFGFDCKN 288
           ++GSSNGLV I P   +  + ++NP TG+ KRLP       V  +  +   +GFGFD   
Sbjct: 165 IVGSSNGLVCISP--GEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDGLT 222

Query: 289 DDYKVVRISCTHPSGKVLDAGVYSLASNSWKNLGIVPYDHFPHGTNIGVLLNGVIHWIAT 468
           DDYK+V++  T  S  +LDA VYSL ++SW+ +  + Y+H       GV  NG IHW+ T
Sbjct: 223 DDYKLVKLVAT--SEDILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHWVFT 280

Query: 469 GIGSSVRVLVCFDV 510
               + RV+V FD+
Sbjct: 281 ESRHNQRVVVAFDI 294


>ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp.
           lyrata] gi|297328298|gb|EFH58717.1| hypothetical protein
           ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
 Frame = +1

Query: 130 LLGSSNGLVYIDPVTSDDNMSIW--NPATGEYKRLP-----VYLDSLDSVAHGFGFDCKN 288
           ++GSSNGLV +    S   + ++  NP TG+ KRLP       ++S +  ++GFGFD   
Sbjct: 136 IVGSSNGLVCLSLGASYKKVPVFLFNPTTGDSKRLPEAPVDTPVESFNFRSYGFGFDDHT 195

Query: 289 DDYKVVRISCTHPSGK-VLDAGVYSLASNSWKNLGIVPYDHFPHGTNIGVLLNGVIHWIA 465
            DYKVV++  T  S + +LDA VYSL +NSW+ + I+ Y         GV  NG IHW+ 
Sbjct: 196 HDYKVVKLVATSVSNQHILDASVYSLKANSWRRICILNYKGSNAFHTCGVHFNGAIHWVL 255

Query: 466 TGIGSSVRVLVCFDV 510
           T      RV++ FD+
Sbjct: 256 TR-HEDHRVILVFDL 269


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 13/137 (9%)
 Frame = +1

Query: 91  INFPFMCGNCMPALLGSSNGLVYIDPVTSDDNMSIWNPATGEYKRLPVY---------LD 243
           +N P MC N    +LGS NGL+ I  V   D++++WNP+T +++ +P             
Sbjct: 85  LNHPLMCYNHGIKVLGSVNGLLCISNVV--DDIAVWNPSTRKHRVVPFLPIELKRYFGTK 142

Query: 244 SLDSVAHGFGFDCKNDDYKVVRISCTHPSGK---VLDAGVYSLASNSWKNLGIVPY-DHF 411
           S      GFG+D   DDYK+VRI+     GK     +  VYSL   SW+ +G +PY  H+
Sbjct: 143 SCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHY 202

Query: 412 PHGTNIGVLLNGVIHWI 462
           P G N GV  NG +HW+
Sbjct: 203 P-GAN-GVFANGALHWV 217


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