BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00011174
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21038.3| unnamed protein product [Vitis vinifera]              325   7e-87
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   325   7e-87
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho...   325   9e-87
ref|XP_002308662.1| rna-dependent RNA polymerase [Populus tricho...   322   6e-86
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   320   3e-85

>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  325 bits (834), Expect = 7e-87
 Identities = 157/266 (59%), Positives = 199/266 (74%), Gaps = 1/266 (0%)
 Frame = -1

Query: 926  DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 747
            +YGA+DE C+ LAE AATAVDFPKTGK+V +P  LKPKMYPDFMGKE+F +Y+S K+LG+
Sbjct: 773  EYGALDEACLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILGK 832

Query: 746  LYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDGQLNA 567
            +YR+IKD+ +  V +S +    +F  D +P+D DL IPGSADFI +AW  KC YDGQLN 
Sbjct: 833  MYRQIKDAYNEDVSESSEQ---IFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNG 889

Query: 566  LLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGEDSQN 387
            LL Q+ VK EEEVVTGHVWSMPKY +R           AY+S+K+EF+++F+ +  D   
Sbjct: 890  LLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQ 949

Query: 386  LTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVA-TPMLSFAWVPAEYLVRIK 210
            LT+ EKN +YEQKASAWYQVTYHP WVKKS+EL+N D+      MLSFAW+ A+YL RIK
Sbjct: 950  LTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLARIK 1009

Query: 209  IRRRDVRHLDMEKPINSLAGYLVGKI 132
            IRR+   ++D  KPINSLA +LV +I
Sbjct: 1010 IRRKGTGNVDSSKPINSLARFLVDRI 1035


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  325 bits (834), Expect = 7e-87
 Identities = 157/266 (59%), Positives = 199/266 (74%), Gaps = 1/266 (0%)
 Frame = -1

Query: 926  DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 747
            +YGA+DE C+ LAE AATAVDFPKTGK+V +P  LKPKMYPDFMGKE+F +Y+S K+LG+
Sbjct: 935  EYGALDEACLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILGK 994

Query: 746  LYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDGQLNA 567
            +YR+IKD+ +  V +S +    +F  D +P+D DL IPGSADFI +AW  KC YDGQLN 
Sbjct: 995  MYRQIKDAYNEDVSESSEQ---IFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNG 1051

Query: 566  LLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGEDSQN 387
            LL Q+ VK EEEVVTGHVWSMPKY +R           AY+S+K+EF+++F+ +  D   
Sbjct: 1052 LLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQ 1111

Query: 386  LTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVA-TPMLSFAWVPAEYLVRIK 210
            LT+ EKN +YEQKASAWYQVTYHP WVKKS+EL+N D+      MLSFAW+ A+YL RIK
Sbjct: 1112 LTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLARIK 1171

Query: 209  IRRRDVRHLDMEKPINSLAGYLVGKI 132
            IRR+   ++D  KPINSLA +LV +I
Sbjct: 1172 IRRKGTGNVDSSKPINSLARFLVDRI 1197


>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1200

 Score =  325 bits (833), Expect = 9e-87
 Identities = 154/265 (58%), Positives = 200/265 (75%)
 Frame = -1

Query: 926  DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 747
            +YGA D+ C+ LAELAATAVDFPKTGKVV+MP  LKPKMYPDFMGKE++ SYKS+K+LG 
Sbjct: 939  EYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGR 998

Query: 746  LYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDGQLNA 567
            LYR+IKD+ D  V  S +  L      DIPYD+DLE+ G++D+I +AWD+KC YDGQLN 
Sbjct: 999  LYRQIKDAYDEDVAASSELNLVP---GDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNG 1055

Query: 566  LLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGEDSQN 387
            LL Q+ VK EEEVVTGH+WSMPKY++R           +YNS+K+EF+++F+ +  + + 
Sbjct: 1056 LLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQ 1115

Query: 386  LTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLVRIKI 207
            L + EKN +YEQKASAWYQV YHP WVKKS+EL++ D    + MLSFAW+ A+YL RIKI
Sbjct: 1116 LEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGAGTSVMLSFAWIAADYLARIKI 1175

Query: 206  RRRDVRHLDMEKPINSLAGYLVGKI 132
            R R+  ++D  KP+NSLA YL  ++
Sbjct: 1176 RHRETGNVDSAKPVNSLAKYLADRM 1200


>ref|XP_002308662.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1198

 Score =  322 bits (826), Expect = 6e-86
 Identities = 157/269 (58%), Positives = 200/269 (74%), Gaps = 4/269 (1%)
 Frame = -1

Query: 926  DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 747
            +YGA+DEKC+ LAELAATAVDFPKTGK+V+MP +LKPK+YPDFMGKE+  SYKSKK+LG 
Sbjct: 936  EYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGR 995

Query: 746  LYRKIKDSPDLVVGDSDKDTLAVFQVD----DIPYDTDLEIPGSADFIREAWDRKCLYDG 579
            LYR+IKD+ D      D D  A  +++    DIPYD DLE+ G+ DFI +AWDRKC YDG
Sbjct: 996  LYRQIKDAYD------DDDVAASSELNFVRGDIPYDLDLEVLGATDFISDAWDRKCSYDG 1049

Query: 578  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 399
            QLN LL Q+ VK EEEVVTGHVWSMPK ++R           +YN +KREF++VF+ +  
Sbjct: 1050 QLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERLKHSYNCLKREFRQVFEKMDL 1109

Query: 398  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLV 219
            D   L + EKN +YE+KASAWYQVTYHP W++KS+EL++SD    + MLSFAW+ A+YL 
Sbjct: 1110 DFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLELQDSDGAGISVMLSFAWIAADYLA 1169

Query: 218  RIKIRRRDVRHLDMEKPINSLAGYLVGKI 132
            RIKIR   + ++D  KP+NSLA YL  ++
Sbjct: 1170 RIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  320 bits (820), Expect = 3e-85
 Identities = 157/270 (58%), Positives = 191/270 (70%), Gaps = 5/270 (1%)
 Frame = -1

Query: 926  DYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKVLGE 747
            +YGA+DE CIKLAELAATAVDFPKTGK+V MP  LKPK+YPDFMGKED+ SY S K+LG 
Sbjct: 936  EYGALDENCIKLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDYQSYNSNKILGR 995

Query: 746  LYRKIKDSPDLVVGDSDKDTLAVFQV-----DDIPYDTDLEIPGSADFIREAWDRKCLYD 582
            LYR++KD  D    D D D  A          DIPYD DLE+ GS+D+I +AWD+KC YD
Sbjct: 996  LYRQVKD--DYNDDDDDDDDAATSSELNLVRGDIPYDKDLEVSGSSDYILDAWDQKCSYD 1053

Query: 581  GQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLG 402
            GQL  LL Q+ VK EEEVVTGH+WSMPK N+R           +Y+S+K+EF++VF+ + 
Sbjct: 1054 GQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQVFEKMD 1113

Query: 401  EDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYL 222
             D + LTE EKN +YEQKASAWYQV YHP+WV KS+EL+  D      MLSFAW+ A+YL
Sbjct: 1114 SDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNKSMELQEPDAAGCASMLSFAWIAADYL 1173

Query: 221  VRIKIRRRDVRHLDMEKPINSLAGYLVGKI 132
             RIKIR R    +D  KP+NSL  YL  +I
Sbjct: 1174 ARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203