BLASTX nr result

ID: Papaver22_contig00010499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00010499
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...    69   3e-18
ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing fact...    69   3e-18
ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicag...    67   2e-17
ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing fact...    67   2e-17
gb|ADE76957.1| unknown [Picea sitchensis]                              67   3e-17

>ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor
            8-like [Cucumis sativus]
          Length = 2347

 Score = 68.6 bits (166), Expect(2) = 3e-18
 Identities = 33/46 (71%), Positives = 35/46 (76%)
 Frame = -3

Query: 836  PP*QP*VKDIRCIITVSQLGTHQQVTLLLALPEHDFLNDLEPLGLM 699
            PP  P VK+IRCI+   Q GTHQQV L  ALPEHDFLNDLEPLG M
Sbjct: 2145 PPDNPQVKEIRCIVMPPQWGTHQQVNLPTALPEHDFLNDLEPLGWM 2190



 Score = 50.4 bits (119), Expect(2) = 3e-18
 Identities = 26/39 (66%), Positives = 28/39 (71%)
 Frame = -1

Query: 928  YTYSMLKKIF*KFNYIEDLRTQIAGYLYCVSPLDNPK*K 812
            YTY M K I  KF  I DLRTQIAGYLY +SP DNP+ K
Sbjct: 2114 YTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQVK 2152


>ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cucumis
            sativus]
          Length = 2347

 Score = 68.6 bits (166), Expect(2) = 3e-18
 Identities = 33/46 (71%), Positives = 35/46 (76%)
 Frame = -3

Query: 836  PP*QP*VKDIRCIITVSQLGTHQQVTLLLALPEHDFLNDLEPLGLM 699
            PP  P VK+IRCI+   Q GTHQQV L  ALPEHDFLNDLEPLG M
Sbjct: 2145 PPDNPQVKEIRCIVMPPQWGTHQQVNLPTALPEHDFLNDLEPLGWM 2190



 Score = 50.4 bits (119), Expect(2) = 3e-18
 Identities = 26/39 (66%), Positives = 28/39 (71%)
 Frame = -1

Query: 928  YTYSMLKKIF*KFNYIEDLRTQIAGYLYCVSPLDNPK*K 812
            YTY M K I  KF  I DLRTQIAGYLY +SP DNP+ K
Sbjct: 2114 YTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQVK 2152


>ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicago truncatula]
            gi|355486962|gb|AES68165.1| Pre-mRNA-processing-splicing
            factor [Medicago truncatula]
          Length = 2398

 Score = 67.4 bits (163), Expect(2) = 2e-17
 Identities = 33/46 (71%), Positives = 35/46 (76%)
 Frame = -3

Query: 836  PP*QP*VKDIRCIITVSQLGTHQQVTLLLALPEHDFLNDLEPLGLM 699
            PP  P VK+IRCI+   Q GTHQQV L  ALPEHDFLNDLEPLG M
Sbjct: 2190 PPDNPQVKEIRCIVMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWM 2235



 Score = 49.3 bits (116), Expect(2) = 2e-17
 Identities = 25/39 (64%), Positives = 28/39 (71%)
 Frame = -1

Query: 928  YTYSMLKKIF*KFNYIEDLRTQIAGYLYCVSPLDNPK*K 812
            YTY M K I  KF  I DLRTQI+GYLY +SP DNP+ K
Sbjct: 2159 YTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVK 2197


>ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
          Length = 2358

 Score = 67.4 bits (163), Expect(2) = 2e-17
 Identities = 33/46 (71%), Positives = 35/46 (76%)
 Frame = -3

Query: 836  PP*QP*VKDIRCIITVSQLGTHQQVTLLLALPEHDFLNDLEPLGLM 699
            PP  P VK+IRCI+   Q GTHQQV L  ALPEHDFLNDLEPLG M
Sbjct: 2155 PPDNPQVKEIRCIVMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWM 2200



 Score = 48.9 bits (115), Expect(2) = 2e-17
 Identities = 25/39 (64%), Positives = 28/39 (71%)
 Frame = -1

Query: 928  YTYSMLKKIF*KFNYIEDLRTQIAGYLYCVSPLDNPK*K 812
            YTY M K I  KF  I DLRTQI+GY+Y VSP DNP+ K
Sbjct: 2124 YTYIMPKNILKKFICIADLRTQISGYMYGVSPPDNPQVK 2162


>gb|ADE76957.1| unknown [Picea sitchensis]
          Length = 422

 Score = 67.4 bits (163), Expect(2) = 3e-17
 Identities = 37/69 (53%), Positives = 44/69 (63%)
 Frame = -3

Query: 836 PP*QP*VKDIRCIITVSQLGTHQQVTLLLALPEHDFLNDLEPLGLMDSFISSLNFNLRYM 657
           PP  P VK+IRCI    Q GTHQQV L LALPEH+FLNDLEPLG M +  + L       
Sbjct: 220 PPDNPQVKEIRCIAMPPQWGTHQQVHLPLALPEHEFLNDLEPLGWMHTQPNEL------P 273

Query: 656 QINPINFVC 630
           Q++P +  C
Sbjct: 274 QLSPQDLTC 282



 Score = 48.5 bits (114), Expect(2) = 3e-17
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = -1

Query: 928 YTYSMLKKIF*KFNYIEDLRTQIAGYLYCVSPLDNPK*K 812
           YTY M K I  KF  I DLRTQI+GY+Y +SP DNP+ K
Sbjct: 189 YTYIMPKNILKKFICIADLRTQISGYIYGISPPDNPQVK 227


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