BLASTX nr result

ID: Papaver22_contig00010484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00010484
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Goss...   100   5e-19
ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana ta...   100   6e-19
ref|XP_002300314.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-18
ref|YP_004237261.1| succinate dehydrogenase subunit 3 (mitochond...    97   3e-18
ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus...    97   3e-18

>gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Gossypium hirsutum]
          Length = 201

 Score =  100 bits (248), Expect = 5e-19
 Identities = 45/94 (47%), Positives = 65/94 (69%)
 Frame = +1

Query: 373 EGEANLLRPLSPHLPVYKPQISSTVSISNRIXXXXXXXXXXXXXXVCLEMSQLCLTYGSF 552
           E + + LRPLSPHLP+YKPQ+S+T+SI+NRI              + L+M  +C TY +F
Sbjct: 100 EAKESNLRPLSPHLPIYKPQLSATLSITNRISGVFLTTALLFSYLLSLKMGSICFTYSNF 159

Query: 553 NQFLFYSSKLVPISLELAAIATAFHLFYGVRDIL 654
            QF FYS+KL P+++ +AA+A ++HL YGVR +L
Sbjct: 160 YQFFFYSAKLAPVTVSIAALAVSYHLCYGVRHLL 193


>ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
           gi|57013992|ref|YP_173464.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|57014032|ref|YP_173503.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|56806628|dbj|BAD83529.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
           gi|56806668|dbj|BAD83569.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 46/90 (51%), Positives = 64/90 (71%)
 Frame = +1

Query: 385 NLLRPLSPHLPVYKPQISSTVSISNRIXXXXXXXXXXXXXXVCLEMSQLCLTYGSFNQFL 564
           N+LRPLSPHLP+YKPQ++ST SIS+RI              +CL++  +C TY +F QF 
Sbjct: 2   NILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFF 61

Query: 565 FYSSKLVPISLELAAIATAFHLFYGVRDIL 654
           FYSSKL+ IS+E+ A+A ++HL+ GVR +L
Sbjct: 62  FYSSKLILISVEITALALSYHLYNGVRHLL 91


>ref|XP_002300314.1| predicted protein [Populus trichocarpa] gi|222847572|gb|EEE85119.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 48/100 (48%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
 Frame = +1

Query: 358 SSTPREGEANLLRPLSPHLPVYKPQISSTVSISNRIXXXXXXXXXXXXXXVCLEMSQLCL 537
           S   +    N+LRPLSPHLP+Y+PQ++ST SI NRI              +CL+   +C 
Sbjct: 182 SDIDQHNTMNILRPLSPHLPIYRPQVNSTFSIVNRISGAFLSTIVLCFYFICLKTGLICF 241

Query: 538 TYGSFNQFLFYSSKLVPISLEL-AAIATAFHLFYGVRDIL 654
            Y +F QFLFYSSKL+  S+++ AA+A A+HLFYGVR +L
Sbjct: 242 NYYNFYQFLFYSSKLILTSIDVTAALALAYHLFYGVRHLL 281


>ref|YP_004237261.1| succinate dehydrogenase subunit 3 (mitochondrion) [Ricinus
           communis] gi|322394268|gb|ADW96025.1| succinate
           dehydrogenase subunit 3 (mitochondrion) [Ricinus
           communis]
          Length = 103

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 44/90 (48%), Positives = 64/90 (71%)
 Frame = +1

Query: 385 NLLRPLSPHLPVYKPQISSTVSISNRIXXXXXXXXXXXXXXVCLEMSQLCLTYGSFNQFL 564
           N+LRPLSPHLP+YKPQ++ST  IS+RI              +CL++S +C TY +F QF 
Sbjct: 2   NILRPLSPHLPIYKPQLTSTYPISHRISGAFLATIVFFFYVLCLKISLICFTYENFYQFF 61

Query: 565 FYSSKLVPISLELAAIATAFHLFYGVRDIL 654
           F+SSKL+ IS+E+ A+A ++HL+ G+R +L
Sbjct: 62  FFSSKLIKISVEMTALALSYHLYNGLRHLL 91


>ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus lanatus]
           gi|295311667|ref|YP_003587234.1| succinate dehydrogenase
           subunit 3 [Citrullus lanatus]
           gi|259156794|gb|ACV96656.1| succinate dehydrogenase
           subunit 3 [Citrullus lanatus]
           gi|259156795|gb|ACV96657.1| succinate dehydrogenase
           subunit 3 [Citrullus lanatus]
          Length = 95

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 45/90 (50%), Positives = 62/90 (68%)
 Frame = +1

Query: 385 NLLRPLSPHLPVYKPQISSTVSISNRIXXXXXXXXXXXXXXVCLEMSQLCLTYGSFNQFL 564
           N+LRPLSPHLP+YKPQ++ST SI +RI              +CL+M  +C TY +F +F 
Sbjct: 2   NILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATLVLFFYLLCLKMGLICFTYSNFYRFF 61

Query: 565 FYSSKLVPISLELAAIATAFHLFYGVRDIL 654
           FYSSKL+ IS E+ A+A ++HL+ GVR +L
Sbjct: 62  FYSSKLILISAEITALALSYHLYNGVRHLL 91


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