BLASTX nr result

ID: Papaver22_contig00010439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00010439
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328863.1| predicted protein [Populus trichocarpa] gi|1...   147   2e-33
ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...   144   8e-33
gb|AFK48773.1| unknown [Lotus japonicus]                              144   1e-32
ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [...   144   1e-32
gb|AFK47118.1| unknown [Lotus japonicus]                              142   3e-32

>ref|XP_002328863.1| predicted protein [Populus trichocarpa] gi|118482403|gb|ABK93124.1|
           unknown [Populus trichocarpa]
           gi|222839293|gb|EEE77630.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score =  147 bits (370), Expect = 2e-33
 Identities = 79/119 (66%), Positives = 94/119 (78%), Gaps = 4/119 (3%)
 Frame = +3

Query: 147 MAFASKLGSLVRQA---NGQGSLASMYNAVRCMSGGPGGSKLFIGGLSYDTDDNALKAAF 317
           MAF +K GSLVRQ+   NGQ  +ASM N++RCMS     SKLFIGGL++ TDD +LK AF
Sbjct: 1   MAFFNKFGSLVRQSVSQNGQVPMASMLNSIRCMSS----SKLFIGGLAWSTDDQSLKDAF 56

Query: 318 DNFGVVTDARVITDRDTGRSRGFGFVSYSCEENASQALT-MDGQDLGGRNIRVSYANER 491
             FG VT+ARVITDRDTGRSRGFGFVSY   E+AS+AL+ MDGQ+LGGRNIRV YA ++
Sbjct: 57  SGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDK 115


>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score =  144 bits (364), Expect = 8e-33
 Identities = 75/125 (60%), Positives = 97/125 (77%), Gaps = 8/125 (6%)
 Frame = +3

Query: 147 MAFASKLGSLVRQA-------NGQGSLASMYNAVRCMSGGPGGSKLFIGGLSYDTDDNAL 305
           MAF ++ G+L+RQ+        GQGS+ ++ N++RCMS     +KLFIGGLSY TDD +L
Sbjct: 1   MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSS----AKLFIGGLSYGTDDQSL 56

Query: 306 KAAFDNFGVVTDARVITDRDTGRSRGFGFVSYSCEENASQALT-MDGQDLGGRNIRVSYA 482
           K AF +FG V +ARVITDRDTGRSRGFGFV+++ +++AS AL+ MDGQ+L GRNIRVSYA
Sbjct: 57  KDAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYA 116

Query: 483 NERPP 497
           NER P
Sbjct: 117 NERTP 121


>gb|AFK48773.1| unknown [Lotus japonicus]
          Length = 146

 Score =  144 bits (363), Expect = 1e-32
 Identities = 78/120 (65%), Positives = 93/120 (77%), Gaps = 4/120 (3%)
 Frame = +3

Query: 147 MAFASKLGSLVRQANGQGS---LASMYNAVRCMSGGPGGSKLFIGGLSYDTDDNALKAAF 317
           MAF +K+G+++RQA  Q S   +ASM N +RCMS     SKLFIGGLSY  DD +L+ AF
Sbjct: 1   MAFLNKVGNVLRQAAAQRSQAPVASMLNYIRCMSS----SKLFIGGLSYGVDDKSLEDAF 56

Query: 318 DNFGVVTDARVITDRDTGRSRGFGFVSYSCEENASQAL-TMDGQDLGGRNIRVSYANERP 494
            +FG V +ARVI DRDTGRSRGFGFVS+  EE+AS AL +MDGQDL GRNIRVSYAN+RP
Sbjct: 57  SSFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDRP 116


>ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 134

 Score =  144 bits (363), Expect = 1e-32
 Identities = 79/122 (64%), Positives = 95/122 (77%), Gaps = 4/122 (3%)
 Frame = +3

Query: 147 MAFASKLGSLVRQA---NGQGSLASMYNAVRCMSGGPGGSKLFIGGLSYDTDDNALKAAF 317
           MAF +K+GSLVRQ+   NG+  ++SM N++RCMS     SKLFIGGLSY T+D++LK AF
Sbjct: 1   MAFCNKIGSLVRQSVAQNGKVPVSSMLNSIRCMSS----SKLFIGGLSYGTNDDSLKDAF 56

Query: 318 DNFGVVTDARVITDRDTGRSRGFGFVSYSCEENASQALT-MDGQDLGGRNIRVSYANERP 494
             FG V  ARVITDRDTGRSRGFGFV +S  ++AS AL+ MDGQ+L GRNIRVSYA ER 
Sbjct: 57  SGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAMDGQELHGRNIRVSYATERA 116

Query: 495 PR 500
           PR
Sbjct: 117 PR 118


>gb|AFK47118.1| unknown [Lotus japonicus]
          Length = 146

 Score =  142 bits (359), Expect = 3e-32
 Identities = 77/120 (64%), Positives = 92/120 (76%), Gaps = 4/120 (3%)
 Frame = +3

Query: 147 MAFASKLGSLVRQANGQGS---LASMYNAVRCMSGGPGGSKLFIGGLSYDTDDNALKAAF 317
           MAF +K+G+++RQ   Q S   +ASM N +RCMS     SKLFIGGLSY  DD +L+ AF
Sbjct: 1   MAFLNKVGNVLRQGAAQRSQAPVASMLNYIRCMSS----SKLFIGGLSYGVDDKSLEDAF 56

Query: 318 DNFGVVTDARVITDRDTGRSRGFGFVSYSCEENASQAL-TMDGQDLGGRNIRVSYANERP 494
            +FG V +ARVI DRDTGRSRGFGFVS+  EE+AS AL +MDGQDL GRNIRVSYAN+RP
Sbjct: 57  SSFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDRP 116


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