BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00010353
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...    60   3e-07
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...    59   4e-07
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...    58   1e-06

>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
 Frame = +3

Query: 105  SHYEMDDTEADMGDEHEEY----ANVNTRDTMNRMMDDEDDNGADVAQD-LAAAGLEDSD 269
            S YEM+  EADM D+H+E     ANVN R+     M+D+DDN  + AQD LAAAGLEDSD
Sbjct: 966  SRYEME--EADMMDDHDEPEDDDANVNFREP-GYQMNDQDDNAEENAQDVLAAAGLEDSD 1022

Query: 270  VEDEAAA 290
             +D+AAA
Sbjct: 1023 ADDDAAA 1029


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
            gi|223544778|gb|EEF46294.1| tpr repeat nuclear
            phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
 Frame = +3

Query: 105  SHYEMDDTEADMGDEHEEY----ANVNTRDTMNRMMDDEDDNGADVAQDL-AAAGLEDSD 269
            S YE+++ EADM D+ EE     ANVN  +  NR+ D++D++  + AQDL AAAGLEDSD
Sbjct: 942  SRYEIEEGEADMMDDREELEDEDANVNYGEHKNRL-DNQDEDAEENAQDLLAAAGLEDSD 1000

Query: 270  VEDEAAASNVNKK 308
             ED A +S   ++
Sbjct: 1001 AEDAAPSSTARRR 1013


>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
 Frame = +3

Query: 9    SKRKERSHAXXXXXXXXXXXXXXXXXXXXXXXSHYEMDDTEADMGDEHEEY----ANVNT 176
            SKRKERS                         S Y+ ++  AD  D+ +E      N+N 
Sbjct: 934  SKRKERSQIDDDEGGQSERRRRKGGKRRKKDKSRYDSEEARADAMDDQDEMEDEDTNMNH 993

Query: 177  RDTMNRMMDDEDDNGADVAQDL-AAAGLEDSDVEDEAA 287
            R++ N+M +++DD+G D AQDL AAAGLEDSD ED+ A
Sbjct: 994  RESTNQM-NNQDDDGEDDAQDLLAAAGLEDSDAEDDMA 1030