BLASTX nr result

ID: Papaver22_contig00010314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00010314
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612169.1| F-box family protein [Medicago truncatula] g...    66   4e-09
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub...    62   6e-08
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...    62   6e-08
ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula] ...    62   8e-08
ref|XP_003611119.1| F-box family protein [Medicago truncatula] g...    60   3e-07

>ref|XP_003612169.1| F-box family protein [Medicago truncatula]
            gi|355513504|gb|AES95127.1| F-box family protein
            [Medicago truncatula]
          Length = 1154

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 49/141 (34%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
 Frame = -3

Query: 395  GEYIGYDTKKINLEFPA--DVCGFVGSYNGLICLSVAMKCKPIQFLSNPGDGNVLEGFNR 222
            GE    D++++N++F    D  G   S NGL+CL     C P                  
Sbjct: 831  GENSNGDSQRLNIDFKPYYDKFGVANSCNGLLCL-----CCP------------------ 867

Query: 221  KSDE-PLYICNPVTREIVTLPALSIKNKKN----NISVVHGFGYHPLTKEYKVVRIWYGS 57
             SDE PL ICNPVT E + LP  +I         N+    GFG+ P T EYKV+RIW   
Sbjct: 868  -SDEHPLSICNPVTGEFIKLPEATINTHDERSPLNMRGQVGFGFQPKTNEYKVIRIWGSD 926

Query: 56   IGSSNGVTGQ---VEVYTLGS 3
            +   N        +E+YTLG+
Sbjct: 927  VKRGNRWVFDRMVLEIYTLGT 947


>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328394|gb|EFH58813.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
 Frame = -3

Query: 374 TKKINLEFPADVCGF--VGSYNGLICLSVAMKCKPIQFLSNPGDGNVLEGFNRKSDEPLY 201
           TKK  L F + +  F  VGS NGL+CLS ++                        ++ LY
Sbjct: 101 TKKFTLRFESSMPEFDVVGSCNGLLCLSDSLY-----------------------NDSLY 137

Query: 200 ICNPVTREIVTLPALSIKNKKNNISVVHGFGYHPLTKEYKVVRIWY--GSIGSSNGV--- 36
           + NP T   + LP  S  NK ++  +V GFG+H +TK+YKV++I Y  GS  S+NG+   
Sbjct: 138 LYNPFTTNSLELPECS--NKYHDQELVFGFGFHEMTKDYKVLKIVYFRGSSSSNNGIYRG 195

Query: 35  -------TGQVEVYTLGS 3
                    +V++ TL S
Sbjct: 196 RGRIQYKQSEVQILTLSS 213


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
           gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
           protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
           unknown protein [Arabidopsis thaliana]
           gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
           [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
           At3g07870 [Arabidopsis thaliana]
           gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
           thaliana]
          Length = 417

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
 Frame = -3

Query: 374 TKKINLEFPADVCGF--VGSYNGLICLSVAMKCKPIQFLSNPGDGNVLEGFNRKSDEPLY 201
           TKK  L F + +  F  VGS NGL+CLS ++                        ++ LY
Sbjct: 103 TKKFTLRFASSMPEFDVVGSCNGLLCLSDSLY-----------------------NDSLY 139

Query: 200 ICNPVTREIVTLPALSIKNKKNNISVVHGFGYHPLTKEYKVVRIWY--GSIGSSNGV--- 36
           + NP T   + LP  S  NK ++  +V GFG+H +TKEYKV++I Y  GS  ++NG+   
Sbjct: 140 LYNPFTTNSLELPECS--NKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRG 197

Query: 35  -------TGQVEVYTLGS 3
                    +V++ TL S
Sbjct: 198 RGRIQYKQSEVQILTLSS 215


>ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula]
           gi|355512467|gb|AES94090.1| S-locus F-box protein
           [Medicago truncatula]
          Length = 464

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
 Frame = -3

Query: 344 DVCGFVGSYNGLICLSVAMKCKPIQFLSNPGDGNVLEGFNRKSDEPLYICNPVTREIVTL 165
           D  G V S NGL+CLS                          +  PL ICNPVTRE   L
Sbjct: 130 DKFGIVNSCNGLLCLS-----------------------ETSTGSPLAICNPVTREFTIL 166

Query: 164 PALSIKNKK-NNISVVHGFGYHPLTKEYKVVRIWYGSIGSSNGVTGQ---VEVYTLGS 3
           P L+  +   N+  V  GFG+ P T EYKV+ +W   +  +N +  +   +E++TLG+
Sbjct: 167 PELTTTSDWFNSARVQAGFGFQPKTNEYKVIIMWNKHVRRANDLVFERLVLEIHTLGT 224


>ref|XP_003611119.1| F-box family protein [Medicago truncatula]
           gi|355512454|gb|AES94077.1| F-box family protein
           [Medicago truncatula]
          Length = 560

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
 Frame = -3

Query: 344 DVCGFVGSYNGLICLSVAMKCKPIQFLSNPGDGNVLEGFNRKSDEPLYICNPVTREIVTL 165
           D  G V S NGL+CLS                             PL ICNPVTRE   L
Sbjct: 257 DKFGIVNSCNGLLCLS-----------------------ETSIGSPLVICNPVTREFTIL 293

Query: 164 PALSIKNK-KNNISVVHGFGYHPLTKEYKVVRIWYGSIGSSNGVTGQ---VEVYTLGS 3
           P L+  +   N+  V  GFG+ P T EYKV+ +W   +   N +  +   +E++TLG+
Sbjct: 294 PELTTTSDWFNSARVQAGFGFQPKTNEYKVIIMWNKYVRRDNRLVFERVVLEIHTLGT 351


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