BLASTX nr result

ID: Papaver22_contig00010270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00010270
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li...   215   4e-54
emb|CBI24290.3| unnamed protein product [Vitis vinifera]              215   4e-54
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li...   205   4e-51
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li...   205   4e-51
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi...   203   2e-50

>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
          Length = 933

 Score =  215 bits (548), Expect = 4e-54
 Identities = 119/191 (62%), Positives = 137/191 (71%)
 Frame = -1

Query: 575 EWLSHWNDHFLHTXXXXXXXXXXXXXXXXAVLISGSPGIGKSTSAKLVSQMLGFQSIEVN 396
           EWL+HWN+ FLHT                AVL+SG+PGIGK+TSAKLVSQMLGFQ+IEVN
Sbjct: 340 EWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVN 399

Query: 395 ASDSRGKADSKILKGIGGSMANSIKELVSNESLSVKMERSKHQKTVLIMDEVDGMSSGDR 216
           ASD+RGKA++KI KGIGGS ANSIKELVSNE+L   M+RSKH KTVLIMDEVDGMS+GDR
Sbjct: 400 ASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKTVLIMDEVDGMSAGDR 459

Query: 215 GGVADLXXXXXXXXXXXXXXCNDRHSQXXXXXXXXXXXXXYRKPTKLQMAKRLMQVATTE 36
           GGVADL              CNDR+SQ             +RKPTK QMAKRL+QVA  E
Sbjct: 460 GGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLLQVANAE 519

Query: 35  GIKVDNEMALE 3
           G++V NE+ALE
Sbjct: 520 GLQV-NEIALE 529


>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  215 bits (548), Expect = 4e-54
 Identities = 119/191 (62%), Positives = 137/191 (71%)
 Frame = -1

Query: 575 EWLSHWNDHFLHTXXXXXXXXXXXXXXXXAVLISGSPGIGKSTSAKLVSQMLGFQSIEVN 396
           EWL+HWN+ FLHT                AVL+SG+PGIGK+TSAKLVSQMLGFQ+IEVN
Sbjct: 348 EWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVN 407

Query: 395 ASDSRGKADSKILKGIGGSMANSIKELVSNESLSVKMERSKHQKTVLIMDEVDGMSSGDR 216
           ASD+RGKA++KI KGIGGS ANSIKELVSNE+L   M+RSKH KTVLIMDEVDGMS+GDR
Sbjct: 408 ASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKTVLIMDEVDGMSAGDR 467

Query: 215 GGVADLXXXXXXXXXXXXXXCNDRHSQXXXXXXXXXXXXXYRKPTKLQMAKRLMQVATTE 36
           GGVADL              CNDR+SQ             +RKPTK QMAKRL+QVA  E
Sbjct: 468 GGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLLQVANAE 527

Query: 35  GIKVDNEMALE 3
           G++V NE+ALE
Sbjct: 528 GLQV-NEIALE 537


>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 942

 Score =  205 bits (522), Expect = 4e-51
 Identities = 113/191 (59%), Positives = 133/191 (69%)
 Frame = -1

Query: 575 EWLSHWNDHFLHTXXXXXXXXXXXXXXXXAVLISGSPGIGKSTSAKLVSQMLGFQSIEVN 396
           +WL+HWN++FL                  AVL+ G PGIGK+TSAKLVSQMLGF++IEVN
Sbjct: 350 DWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVN 409

Query: 395 ASDSRGKADSKILKGIGGSMANSIKELVSNESLSVKMERSKHQKTVLIMDEVDGMSSGDR 216
           ASD+RGK+D+KI KGIGGS ANSIKEL+SNESL  KM + KH KTVLIMDEVDGMS+GDR
Sbjct: 410 ASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMNQPKHHKTVLIMDEVDGMSAGDR 469

Query: 215 GGVADLXXXXXXXXXXXXXXCNDRHSQXXXXXXXXXXXXXYRKPTKLQMAKRLMQVATTE 36
           GGVADL              CNDR+SQ             +RKPTK QMAKRL+QVA  E
Sbjct: 470 GGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLVQVANAE 529

Query: 35  GIKVDNEMALE 3
           G++V NE+ALE
Sbjct: 530 GLQV-NEIALE 539


>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 981

 Score =  205 bits (522), Expect = 4e-51
 Identities = 113/191 (59%), Positives = 133/191 (69%)
 Frame = -1

Query: 575 EWLSHWNDHFLHTXXXXXXXXXXXXXXXXAVLISGSPGIGKSTSAKLVSQMLGFQSIEVN 396
           +WL+HWN++FL                  AVL+ G PGIGK+TSAKLVSQMLGF++IEVN
Sbjct: 376 DWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVN 435

Query: 395 ASDSRGKADSKILKGIGGSMANSIKELVSNESLSVKMERSKHQKTVLIMDEVDGMSSGDR 216
           ASD+RGK+D+KI KGIGGS ANSIKEL+SNESL  KM + KH KTVLIMDEVDGMS+GDR
Sbjct: 436 ASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMNQPKHHKTVLIMDEVDGMSAGDR 495

Query: 215 GGVADLXXXXXXXXXXXXXXCNDRHSQXXXXXXXXXXXXXYRKPTKLQMAKRLMQVATTE 36
           GGVADL              CNDR+SQ             +RKPTK QMAKRL+QVA  E
Sbjct: 496 GGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLVQVANAE 555

Query: 35  GIKVDNEMALE 3
           G++V NE+ALE
Sbjct: 556 GLQV-NEIALE 565


>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
           gi|13374860|emb|CAC34494.1| replication factor C large
           subunit-like protein [Arabidopsis thaliana]
           gi|48958527|gb|AAT47816.1| At5g22010 [Arabidopsis
           thaliana] gi|332005585|gb|AED92968.1| replication factor
           C1 [Arabidopsis thaliana]
          Length = 956

 Score =  203 bits (516), Expect = 2e-50
 Identities = 112/190 (58%), Positives = 132/190 (69%)
 Frame = -1

Query: 572 WLSHWNDHFLHTXXXXXXXXXXXXXXXXAVLISGSPGIGKSTSAKLVSQMLGFQSIEVNA 393
           WLSHW+D F  T                AVL+SG+PGIGK+TSAKLVSQMLGFQ++EVNA
Sbjct: 367 WLSHWHDQFGGTGSKGKGKKLNDAGSKKAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNA 426

Query: 392 SDSRGKADSKILKGIGGSMANSIKELVSNESLSVKMERSKHQKTVLIMDEVDGMSSGDRG 213
           SDSRGKA+S I KGIGGS ANS+KELV+NE+++   +RSKH KTVLIMDEVDGMS+GDRG
Sbjct: 427 SDSRGKANSNIAKGIGGSNANSVKELVNNEAMAANFDRSKHPKTVLIMDEVDGMSAGDRG 486

Query: 212 GVADLXXXXXXXXXXXXXXCNDRHSQXXXXXXXXXXXXXYRKPTKLQMAKRLMQVATTEG 33
           GVADL              CNDR+SQ             YRKPTK QMAKRLM +A  EG
Sbjct: 487 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLMHIAKAEG 546

Query: 32  IKVDNEMALE 3
           +++ NE+ALE
Sbjct: 547 LEI-NEIALE 555


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