BLASTX nr result

ID: Papaver22_contig00010153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00010153
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30028.3| unnamed protein product [Vitis vinifera]              206   5e-51
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...   206   5e-51
ref|XP_002529957.1| Non-structural maintenance of chromosome ele...   196   6e-48
ref|NP_175525.1| Nse4, component of Smc5/6 DNA repair complex [A...   189   4e-46
ref|XP_002304893.1| predicted protein [Populus trichocarpa] gi|2...   189   6e-46

>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  206 bits (524), Expect = 5e-51
 Identities = 106/199 (53%), Positives = 131/199 (65%)
 Frame = +2

Query: 59  DAEEEQTTDTDRNMITMYDILKKNKRVRLDNLLLNRGSFAQTVENLFALSFLVKDGRVKI 238
           D   E+ +DTD+NM  M+DIL+KN+RVRL+NL+LNR SFAQTVENLFALSFLVKDGR +I
Sbjct: 265 DTVVEEKSDTDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFALSFLVKDGRAEI 324

Query: 239 TVDSNGHHLVTPRNGPTPDQVASGVAAYNHFVLRLDFKDWKLMKDTVTVGEELMPHRTPA 418
           TVD  G HLV+PRN P  + V SG   YNHFV R DFKDWKLM  +V  GEELMP R   
Sbjct: 325 TVDGRGCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEELMPQRNSV 384

Query: 419 NITSDTQREATGRSSHGARTSTQREVIRESSRGAAAGTQTTSIRKFSRNQGLVIREDSVI 598
           N+ +++Q ++                        AA   TT IRK SRN+GLV++E +V+
Sbjct: 385 NLPNNSQTDSVAEECE------------------AAAAPTTPIRKLSRNRGLVLQEQAVV 426

Query: 599 EDSPENVNTNLSEAAIRKG 655
           EDSPE+ +     A IRKG
Sbjct: 427 EDSPESDDAGTRAAVIRKG 445


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score =  206 bits (524), Expect = 5e-51
 Identities = 106/199 (53%), Positives = 131/199 (65%)
 Frame = +2

Query: 59  DAEEEQTTDTDRNMITMYDILKKNKRVRLDNLLLNRGSFAQTVENLFALSFLVKDGRVKI 238
           D   E+ +DTD+NM  M+DIL+KN+RVRL+NL+LNR SFAQTVENLFALSFLVKDGR +I
Sbjct: 193 DTVVEEKSDTDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFALSFLVKDGRAEI 252

Query: 239 TVDSNGHHLVTPRNGPTPDQVASGVAAYNHFVLRLDFKDWKLMKDTVTVGEELMPHRTPA 418
           TVD  G HLV+PRN P  + V SG   YNHFV R DFKDWKLM  +V  GEELMP R   
Sbjct: 253 TVDGRGCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEELMPQRNSV 312

Query: 419 NITSDTQREATGRSSHGARTSTQREVIRESSRGAAAGTQTTSIRKFSRNQGLVIREDSVI 598
           N+ +++Q ++                        AA   TT IRK SRN+GLV++E +V+
Sbjct: 313 NLPNNSQTDSVAEECE------------------AAAAPTTPIRKLSRNRGLVLQEQAVV 354

Query: 599 EDSPENVNTNLSEAAIRKG 655
           EDSPE+ +     A IRKG
Sbjct: 355 EDSPESDDAGTRAAVIRKG 373


>ref|XP_002529957.1| Non-structural maintenance of chromosome element, putative [Ricinus
           communis] gi|223530555|gb|EEF32434.1| Non-structural
           maintenance of chromosome element, putative [Ricinus
           communis]
          Length = 391

 Score =  196 bits (497), Expect = 6e-48
 Identities = 105/185 (56%), Positives = 125/185 (67%)
 Frame = +2

Query: 59  DAEEEQTTDTDRNMITMYDILKKNKRVRLDNLLLNRGSFAQTVENLFALSFLVKDGRVKI 238
           D+E E+ TDTD NM TM++IL++NKR RL+NL+LNR SFAQTVENLFALSFLVKDGRV+I
Sbjct: 213 DSEAEKKTDTDNNMSTMFEILRRNKRARLENLILNRRSFAQTVENLFALSFLVKDGRVEI 272

Query: 239 TVDSNGHHLVTPRNGPTPDQVASGVAAYNHFVLRLDFKDWKLMKDTVTVGEELMPHRTPA 418
            VD +GHHLV+PRN P    V SG  AY HFV R DFKDWK+M D V  G+ELMP R   
Sbjct: 273 IVDGSGHHLVSPRNAPAASSVMSGEVAYRHFVFRFDFKDWKVMMDMVPQGDELMPDR--K 330

Query: 419 NITSDTQREATGRSSHGARTSTQREVIRESSRGAAAGTQTTSIRKFSRNQGLVIREDSVI 598
           N  S+T+ E                     S+G    T  T IRK  RN+GLV++EDSV+
Sbjct: 331 NSVSETEPET------------------NISQG---NTNRTPIRKLCRNRGLVVQEDSVV 369

Query: 599 EDSPE 613
           EDSPE
Sbjct: 370 EDSPE 374


>ref|NP_175525.1| Nse4, component of Smc5/6 DNA repair complex [Arabidopsis thaliana]
           gi|12320790|gb|AAG50545.1|AC079828_16 hypothetical
           protein [Arabidopsis thaliana]
           gi|28393397|gb|AAO42122.1| unknown protein [Arabidopsis
           thaliana] gi|29824223|gb|AAP04072.1| unknown protein
           [Arabidopsis thaliana] gi|332194504|gb|AEE32625.1| Nse4,
           component of Smc5/6 DNA repair complex [Arabidopsis
           thaliana]
          Length = 403

 Score =  189 bits (481), Expect = 4e-46
 Identities = 100/185 (54%), Positives = 125/185 (67%)
 Frame = +2

Query: 59  DAEEEQTTDTDRNMITMYDILKKNKRVRLDNLLLNRGSFAQTVENLFALSFLVKDGRVKI 238
           D++ E+ TDTD+NM  M++IL K KRV+L+NL+LNR SFAQTVENLFALSFL KDGRV+I
Sbjct: 219 DSQSEEKTDTDKNMTIMFNILGKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEI 278

Query: 239 TVDSNGHHLVTPRNGPTPDQVASGVAAYNHFVLRLDFKDWKLMKDTVTVGEELMPHRTPA 418
            VD +G H   PRN P  + V SG   YNHFV RLDFKDWKLM + V +GEELMPHR  A
Sbjct: 279 IVDKSGSHFAMPRNAPDANVVMSGEVIYNHFVFRLDFKDWKLMSEMVPLGEELMPHRQTA 338

Query: 419 NITSDTQREATGRSSHGARTSTQREVIRESSRGAAAGTQTTSIRKFSRNQGLVIREDSVI 598
             +S         S+  +   TQ              TQTT IRK SRN+GLV++E++V+
Sbjct: 339 VASS----SCPAASAPASADFTQ-------------DTQTTPIRKLSRNRGLVVQEETVV 381

Query: 599 EDSPE 613
           ED+P+
Sbjct: 382 EDTPD 386


>ref|XP_002304893.1| predicted protein [Populus trichocarpa] gi|222842325|gb|EEE79872.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  189 bits (480), Expect = 6e-46
 Identities = 103/186 (55%), Positives = 124/186 (66%), Gaps = 1/186 (0%)
 Frame = +2

Query: 59  DAEEEQTTDTDRNMITMYDILKKNKRVRLDNLLLNRGSFAQTVENLFALSFLVKDGRVKI 238
           DA  E+ TDTD+NM  ++DILK+ K VRL+NL+LNR SFA+TVENLFALSFLVKDGRVKI
Sbjct: 210 DAGGEKKTDTDKNMKIIFDILKEKKSVRLENLILNRRSFAETVENLFALSFLVKDGRVKI 269

Query: 239 TVDSNGHHLVTPRNGPTPDQVASGVAAYNHFVLRLDFKDWKLMKDTVTVGEELMPHRTPA 418
            VD +G H V+PRN P P  V SG  AY HFV R DF+DWKLMK  V  GEELMPHR  +
Sbjct: 270 VVDESGCHFVSPRNAPAPSSVMSGEVAYRHFVFRFDFRDWKLMKGVVPDGEELMPHRESS 329

Query: 419 NITSDTQREATGRSSHGARTSTQREVIRESSRGAAAGTQTTSIRKFSRNQGLVIREDS-V 595
                +Q E    ++ G R+                    T IRKFSRN+GLV++EDS V
Sbjct: 330 GA---SQVEPDANNTEGTRS-------------------RTPIRKFSRNRGLVVQEDSVV 367

Query: 596 IEDSPE 613
           +EDSP+
Sbjct: 368 VEDSPD 373


Top