BLASTX nr result

ID: Papaver22_contig00009951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00009951
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   240   1e-61
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              240   1e-61
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   211   5e-53
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei...   194   1e-47
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   194   1e-47

>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  240 bits (613), Expect = 1e-61
 Identities = 121/197 (61%), Positives = 151/197 (76%), Gaps = 7/197 (3%)
 Frame = +3

Query: 3    EMPIFPSFTEGNLFSFYELCKDYKWSIEDEQVLSYRSAEH----SHKTLVSGALDTMYPS 170
            EMPIFPS  +G+LFSFYELCK+YKW++EDE+VLS+  AEH     +    SG+ +   P 
Sbjct: 1332 EMPIFPSLPQGDLFSFYELCKNYKWTVEDEKVLSFHMAEHIRGDRYGLPSSGSKEIKLPG 1391

Query: 171  YSDIKDLGFINVVYGRSSGKTNVAVSFSCDFTSESFSLSKMYTASASLWVVSYPPLSLGV 350
            + D KDLGFIN++YGRS+G+T VAVSF+CDF S   S S+ Y+AS S+ VVS  PL+ GV
Sbjct: 1392 HLDEKDLGFINMLYGRSAGRTTVAVSFNCDFISSGHSQSRSYSASMSISVVSELPLAFGV 1451

Query: 351  PITWILPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGA 521
            PITW+LPP+YTTS+LLP   ESY Q D   RKGT+ Y+L+RSCGGKNEE+ KDAISI+  
Sbjct: 1452 PITWVLPPYYTTSSLLPSSSESYGQWD-LSRKGTITYSLLRSCGGKNEEVQKDAISIDRD 1510

Query: 522  RIKTSDSGNLGCIQAKD 572
            RIKT++S NL CIQAKD
Sbjct: 1511 RIKTTESNNLACIQAKD 1527


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  240 bits (613), Expect = 1e-61
 Identities = 121/197 (61%), Positives = 151/197 (76%), Gaps = 7/197 (3%)
 Frame = +3

Query: 3    EMPIFPSFTEGNLFSFYELCKDYKWSIEDEQVLSYRSAEH----SHKTLVSGALDTMYPS 170
            EMPIFPS  +G+LFSFYELCK+YKW++EDE+VLS+  AEH     +    SG+ +   P 
Sbjct: 1257 EMPIFPSLPQGDLFSFYELCKNYKWTVEDEKVLSFHMAEHIRGDRYGLPSSGSKEIKLPG 1316

Query: 171  YSDIKDLGFINVVYGRSSGKTNVAVSFSCDFTSESFSLSKMYTASASLWVVSYPPLSLGV 350
            + D KDLGFIN++YGRS+G+T VAVSF+CDF S   S S+ Y+AS S+ VVS  PL+ GV
Sbjct: 1317 HLDEKDLGFINMLYGRSAGRTTVAVSFNCDFISSGHSQSRSYSASMSISVVSELPLAFGV 1376

Query: 351  PITWILPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGA 521
            PITW+LPP+YTTS+LLP   ESY Q D   RKGT+ Y+L+RSCGGKNEE+ KDAISI+  
Sbjct: 1377 PITWVLPPYYTTSSLLPSSSESYGQWD-LSRKGTITYSLLRSCGGKNEEVQKDAISIDRD 1435

Query: 522  RIKTSDSGNLGCIQAKD 572
            RIKT++S NL CIQAKD
Sbjct: 1436 RIKTTESNNLACIQAKD 1452


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  211 bits (538), Expect = 5e-53
 Identities = 108/192 (56%), Positives = 139/192 (72%), Gaps = 3/192 (1%)
 Frame = +3

Query: 6    MPIFPSFTEGNLFSFYELCKDYKWSIEDEQVLSYRSAEHSHKTLVSGALDTMYPSYSDIK 185
            +PI+PSF EG+LFS YELCK YKW+++DE+VL +  A   H        +  +   +D K
Sbjct: 1247 VPIYPSFLEGDLFSIYELCKKYKWTVDDEKVLDFYKAGGLHG-------EKNWLQLNDEK 1299

Query: 186  DLGFINVVYGRSSGKTNVAVSFSCDFTSESFSLSKMYTASASLWVVSYPPLSLGVPITWI 365
            +LGF+ V+YGRS+G+T+VAVSFSCDF S S+S +++Y AS SL VV Y PL+LG+PITWI
Sbjct: 1300 ELGFMKVLYGRSAGRTSVAVSFSCDFVSTSYSETRLYDASISLLVVPYLPLALGLPITWI 1359

Query: 366  LPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKTS 536
            LPP Y TS++LP   ES+ Q D Q  KG + Y+L+RSC  KNE  HKDAISI+G RIKT 
Sbjct: 1360 LPPHYITSSILPSSLESHGQWDGQSHKGIITYSLLRSC-EKNEGWHKDAISIDGDRIKTM 1418

Query: 537  DSGNLGCIQAKD 572
            +S NL CIQ KD
Sbjct: 1419 ESNNLACIQGKD 1430


>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
            sativus]
          Length = 1758

 Score =  194 bits (492), Expect = 1e-47
 Identities = 102/193 (52%), Positives = 133/193 (68%), Gaps = 3/193 (1%)
 Frame = +3

Query: 3    EMPIFPSFTEGNLFSFYELCKDYKWSIEDEQVLSYRSAEHSHKTLVSGALDTMYPSYSDI 182
            EMPI+P F EG+ FSFY+LCK Y W+IEDE+V  Y                   P Y + 
Sbjct: 1239 EMPIYPLFPEGDAFSFYQLCKGYNWTIEDEKVRLY------------------LPLYMN- 1279

Query: 183  KDLGFINVVYGRSSGKTNVAVSFSCDFTSESFSLSKMYTASASLWVVSYPPLSLGVPITW 362
            +++GFIN+VYGRS+G TN+AVSF C+FTS S   +K++++SASL V+   PL+LGVPITW
Sbjct: 1280 EEIGFINMVYGRSAGITNIAVSFLCEFTSGSKVETKIFSSSASLSVIPNLPLALGVPITW 1339

Query: 363  ILPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKT 533
            ILPPFYT+S  LP   +SY   +SQ RK T+ YT++RSC  K+E+  K+AI I   RIKT
Sbjct: 1340 ILPPFYTSSKALPSSMDSYGHWESQSRKRTITYTVLRSCDKKDEDAWKNAIYINEERIKT 1399

Query: 534  SDSGNLGCIQAKD 572
            S+S N+ CIQAKD
Sbjct: 1400 SESNNIACIQAKD 1412


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
            210-like [Cucumis sativus]
          Length = 2257

 Score =  194 bits (492), Expect = 1e-47
 Identities = 102/193 (52%), Positives = 133/193 (68%), Gaps = 3/193 (1%)
 Frame = +3

Query: 3    EMPIFPSFTEGNLFSFYELCKDYKWSIEDEQVLSYRSAEHSHKTLVSGALDTMYPSYSDI 182
            EMPI+P F EG+ FSFY+LCK Y W+IEDE+V  Y                   P Y + 
Sbjct: 1239 EMPIYPLFPEGDAFSFYQLCKGYNWTIEDEKVRLY------------------LPLYMN- 1279

Query: 183  KDLGFINVVYGRSSGKTNVAVSFSCDFTSESFSLSKMYTASASLWVVSYPPLSLGVPITW 362
            +++GFIN+VYGRS+G TN+AVSF C+FTS S   +K++++SASL V+   PL+LGVPITW
Sbjct: 1280 EEIGFINMVYGRSAGITNIAVSFLCEFTSGSKVETKIFSSSASLSVIPNLPLALGVPITW 1339

Query: 363  ILPPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKT 533
            ILPPFYT+S  LP   +SY   +SQ RK T+ YT++RSC  K+E+  K+AI I   RIKT
Sbjct: 1340 ILPPFYTSSKALPSSMDSYGHWESQSRKRTITYTVLRSCDKKDEDAWKNAIYINEERIKT 1399

Query: 534  SDSGNLGCIQAKD 572
            S+S N+ CIQAKD
Sbjct: 1400 SESNNIACIQAKD 1412


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