BLASTX nr result

ID: Papaver22_contig00009609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00009609
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vit...   218   e-114
ref|XP_002516394.1| spliceosome associated protein, putative [Ri...   215   e-113
ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncat...   211   e-112
gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]       211   e-112
emb|CBI17545.3| unnamed protein product [Vitis vinifera]              206   e-111

>ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
          Length = 373

 Score =  218 bits (556), Expect(3) = e-114
 Identities = 106/124 (85%), Positives = 112/124 (90%)
 Frame = +1

Query: 487 DEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFISYDSFDTSDAAIEAMNGQYLCNRQ 666
           DEKLLYDTFSAFG IV+NPKIMRDP+TGNSRGFGF+SYDSF+ SDAAIEAMNGQYLCNRQ
Sbjct: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQ 183

Query: 667 ITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRPHTMFASGPPTLLNGPAQGNNGPMG 846
           ITVSYAYKKDTKGERHGTPAERVLAASNP   K+RPHT+FASGPPTL N P    NG MG
Sbjct: 184 ITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQA--NGNMG 241

Query: 847 APMP 858
           APMP
Sbjct: 242 APMP 245



 Score =  126 bits (317), Expect(3) = e-114
 Identities = 61/62 (98%), Positives = 62/62 (100%)
 Frame = +3

Query: 24  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 203
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60

Query: 204 VT 209
           VT
Sbjct: 61  VT 62



 Score =  117 bits (292), Expect(3) = e-114
 Identities = 57/60 (95%), Positives = 58/60 (96%)
 Frame = +2

Query: 260 LHQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLDTDV 439
           LHQGYGFVEFRSEEDADYAIK LNMIKL+GKPIRVNKASQDKKSLDVGANLFVGNLD DV
Sbjct: 64  LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDV 123


>ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
           gi|223544492|gb|EEF46011.1| spliceosome associated
           protein, putative [Ricinus communis]
          Length = 376

 Score =  215 bits (547), Expect(3) = e-113
 Identities = 105/124 (84%), Positives = 113/124 (91%)
 Frame = +1

Query: 487 DEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFISYDSFDTSDAAIEAMNGQYLCNRQ 666
           DEKLL+DTFSAFG IV+NPKIMRDPETGNSRGFGFISYDSFD SDAAIEAMNGQYLCNRQ
Sbjct: 124 DEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLCNRQ 183

Query: 667 ITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRPHTMFASGPPTLLNGPAQGNNGPMG 846
           ITVSYAYKKDTKGERHGTPAERVLAASNP + K+RPHT+FASGPPTL + P    NG +G
Sbjct: 184 ITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPSIPQA--NGTVG 241

Query: 847 APMP 858
           AP+P
Sbjct: 242 APVP 245



 Score =  127 bits (320), Expect(3) = e-113
 Identities = 62/62 (100%), Positives = 62/62 (100%)
 Frame = +3

Query: 24  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 203
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 204 VT 209
           VT
Sbjct: 61  VT 62



 Score =  114 bits (285), Expect(3) = e-113
 Identities = 55/60 (91%), Positives = 57/60 (95%)
 Frame = +2

Query: 260 LHQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLDTDV 439
           LHQGYGFVEFRSEEDADYAIK +NMIKL GKPIRVNKASQDKKSLDVGANLF+GNLD DV
Sbjct: 64  LHQGYGFVEFRSEEDADYAIKIMNMIKLFGKPIRVNKASQDKKSLDVGANLFIGNLDPDV 123


>ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
           gi|355489744|gb|AES70947.1| Splicing factor 3B subunit
           [Medicago truncatula]
          Length = 379

 Score =  211 bits (536), Expect(3) = e-112
 Identities = 102/124 (82%), Positives = 111/124 (89%)
 Frame = +1

Query: 487 DEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFISYDSFDTSDAAIEAMNGQYLCNRQ 666
           DEKLLYDTFSAFG IV+NPKIMRDP+TGNSRGFGFISYDSF+ SD+AIEAMNGQYLCNRQ
Sbjct: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQ 183

Query: 667 ITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRPHTMFASGPPTLLNGPAQGNNGPMG 846
           ITVSYAYKKDTKGERHGTPAERVLAASNP   K+RPHT+FASGPP+L N P    NG + 
Sbjct: 184 ITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQA--NGTIP 241

Query: 847 APMP 858
           AP+P
Sbjct: 242 APVP 245



 Score =  127 bits (319), Expect(3) = e-112
 Identities = 61/62 (98%), Positives = 62/62 (100%)
 Frame = +3

Query: 24  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 203
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQ+SEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR 60

Query: 204 VT 209
           VT
Sbjct: 61  VT 62



 Score =  115 bits (287), Expect(3) = e-112
 Identities = 55/59 (93%), Positives = 57/59 (96%)
 Frame = +2

Query: 263 HQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLDTDV 439
           HQGYGFVEFRSEEDADYAIK LNMIKL+GKPIRVNKASQDKKSLDVGANLF+GNLD DV
Sbjct: 65  HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDV 123


>gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
          Length = 368

 Score =  211 bits (536), Expect(3) = e-112
 Identities = 104/124 (83%), Positives = 109/124 (87%)
 Frame = +1

Query: 487 DEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFISYDSFDTSDAAIEAMNGQYLCNRQ 666
           DEKLLYDTFSAFG IV+NPKIMRDPETGNSRGFGFISYDSF+ SDAAIEAMNGQYLCNRQ
Sbjct: 124 DEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183

Query: 667 ITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRPHTMFASGPPTLLNGPAQGNNGPMG 846
           ITVSYAYKKDTKGERHGTPAERVLAASNP   K+RPHTMFASGPPTL N      N  + 
Sbjct: 184 ITVSYAYKKDTKGERHGTPAERVLAASNPNVQKSRPHTMFASGPPTLQNVAQASAN--IA 241

Query: 847 APMP 858
           AP+P
Sbjct: 242 APVP 245



 Score =  127 bits (320), Expect(3) = e-112
 Identities = 62/62 (100%), Positives = 62/62 (100%)
 Frame = +3

Query: 24  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 203
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 204 VT 209
           VT
Sbjct: 61  VT 62



 Score =  114 bits (284), Expect(3) = e-112
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = +2

Query: 263 HQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLDTDV 439
           HQGYGFVEFRSEEDADYAIK LNMIKL+GKPIRVNKASQDKKS+DVGANLF+GNLD DV
Sbjct: 65  HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSVDVGANLFIGNLDPDV 123


>emb|CBI17545.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  206 bits (523), Expect(3) = e-111
 Identities = 97/109 (88%), Positives = 103/109 (94%)
 Frame = +1

Query: 487 DEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFISYDSFDTSDAAIEAMNGQYLCNRQ 666
           DEKLLYDTFSAFG IV+NPKIMRDP+TGNSRGFGF+SYDSF+ SDAAIEAMNGQYLCNRQ
Sbjct: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQ 183

Query: 667 ITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRPHTMFASGPPTLLN 813
           ITVSYAYKKDTKGERHGTPAERVLAASNP   K+RPHT+FASGPPTL N
Sbjct: 184 ITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPN 232



 Score =  126 bits (317), Expect(3) = e-111
 Identities = 61/62 (98%), Positives = 62/62 (100%)
 Frame = +3

Query: 24  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 203
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60

Query: 204 VT 209
           VT
Sbjct: 61  VT 62



 Score =  117 bits (292), Expect(3) = e-111
 Identities = 57/60 (95%), Positives = 58/60 (96%)
 Frame = +2

Query: 260 LHQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLDTDV 439
           LHQGYGFVEFRSEEDADYAIK LNMIKL+GKPIRVNKASQDKKSLDVGANLFVGNLD DV
Sbjct: 64  LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDV 123


Top