BLASTX nr result

ID: Papaver22_contig00009530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00009530
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90...    89   4e-16
gb|AFK33945.1| unknown [Lotus japonicus]                               88   7e-16
ref|XP_002528622.1| mRNA turnover protein 4 mrt4, putative [Rici...    87   2e-15
ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [...    87   2e-15

>ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|222860140|gb|EEE97687.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = +3

Query: 3   KGVIELVSDFVVCEEGKPLSPEASRILRLHGNKMATFRLHIICSWSPEHMVLF 161
           KGVI+LVS+FVVCEEGKPLSPE+SRILRL G KMATFRLH+IC WSPE   L+
Sbjct: 165 KGVIDLVSNFVVCEEGKPLSPESSRILRLLGTKMATFRLHLICRWSPEDFELY 217


>gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative
           ribosomal protein L1 [Solanum tuberosum]
          Length = 229

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 39/53 (73%), Positives = 47/53 (88%)
 Frame = +3

Query: 3   KGVIELVSDFVVCEEGKPLSPEASRILRLHGNKMATFRLHIICSWSPEHMVLF 161
           +GV+ELVSDFVVCEEG+PLSPEA+RILRL G KMATFRLH+IC WSP+   ++
Sbjct: 165 RGVVELVSDFVVCEEGRPLSPEAARILRLLGKKMATFRLHLICRWSPDEFEIY 217


>gb|AFK33945.1| unknown [Lotus japonicus]
          Length = 229

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 40/54 (74%), Positives = 47/54 (87%)
 Frame = +3

Query: 3   KGVIELVSDFVVCEEGKPLSPEASRILRLHGNKMATFRLHIICSWSPEHMVLFM 164
           KGV+ELVSD VVCEEGKPLSPEASRILRL G KMATFRLH++C W+P+   L++
Sbjct: 165 KGVVELVSDLVVCEEGKPLSPEASRILRLLGIKMATFRLHLVCRWTPDDFELYI 218


>ref|XP_002528622.1| mRNA turnover protein 4 mrt4, putative [Ricinus communis]
           gi|223531967|gb|EEF33780.1| mRNA turnover protein 4
           mrt4, putative [Ricinus communis]
          Length = 182

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/53 (77%), Positives = 46/53 (86%)
 Frame = +3

Query: 3   KGVIELVSDFVVCEEGKPLSPEASRILRLHGNKMATFRLHIICSWSPEHMVLF 161
           KGV+ELVSDFVVCEEGK LSPE++RILRL G KMATFRLH+IC WSPE   L+
Sbjct: 118 KGVVELVSDFVVCEEGKHLSPESARILRLLGIKMATFRLHLICRWSPEDFELY 170


>ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
           gi|298204604|emb|CBI23879.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/53 (73%), Positives = 46/53 (86%)
 Frame = +3

Query: 3   KGVIELVSDFVVCEEGKPLSPEASRILRLHGNKMATFRLHIICSWSPEHMVLF 161
           KGV+ELVSDFVVCEEG PLSPE++RILRL G KMATFRLH++C WSP+   L+
Sbjct: 165 KGVVELVSDFVVCEEGTPLSPESARILRLLGIKMATFRLHLVCRWSPDEFDLY 217


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