BLASTX nr result

ID: Papaver22_contig00009351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00009351
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   553   e-155
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ...   524   e-146
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an...   515   e-143
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an...   498   e-138
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin...   496   e-138

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
            protein product [Vitis vinifera]
          Length = 372

 Score =  553 bits (1425), Expect = e-155
 Identities = 275/377 (72%), Positives = 318/377 (84%)
 Frame = -2

Query: 1169 MPKVSAFNMPDVPMGQLPPHLELQRTRVSCDKDAPTHTENVQSAGAYASVGVDNSLCLDQ 990
            M +  A +MPDVP GQLPPH+ELQRTRV C+ DAPTHTENVQ +GAY+S+GVDNSL +DQ
Sbjct: 1    MHRSPALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQ 60

Query: 989  FRKNFRVTVVRLTEDDMEFDMIGIDPSIANAFRRILISEVPTMAIEKVLIKNSTTLVQDE 810
            F  NFRV V+RL+EDDMEFDMIGIDPSIANAFRRILI+E+PTMAIEKVLI N+T++VQDE
Sbjct: 61   FCNNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDE 120

Query: 809  VLAHRLGLIPIKADPRFFEYTSXXXXXXXXXXXNTIVFKLHAKCERGKPRLPVKSDQLKW 630
            VLAHRLGLIPI ADPR F+  S            TIVF LH +CERG PRL VKS++LKW
Sbjct: 121  VLAHRLGLIPINADPRLFDDLSENDTPNEKN---TIVFNLHVRCERGGPRLTVKSNELKW 177

Query: 629  LPGGSEFEVEKPSGPDSTPETSAKKTYTNFTCNQASMPQFANNPIVPKHPDIIISKLGPG 450
            LP GSEF +   +   S+  TS  KTYT+F+C+Q S+P+F++  I PKHPDIII+KLGPG
Sbjct: 178  LPHGSEFPLATENTTSSS--TSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPG 235

Query: 449  QEIELEAHAVKGMGKTHAKWSPVSTAWYRMLPEVVLLQDIEDELAVELVKKCPAKVFDIE 270
            QEIELEAHAVKGMGKTHAKWSPV+TAWYRMLPEVVLLQ+IEDE A ELVKKCP  VFDIE
Sbjct: 236  QEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIE 295

Query: 269  DLGKGKKKATVARPRSCTLCRECIREENWEKRVSLRRVKDHFIFTIESSGALPPEELFTE 90
            D+ KGKKKATVARPR+CTLCRECIR ++W+K V++RRVK+HFIFTIES+GALPPE LF E
Sbjct: 296  DIAKGKKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNE 355

Query: 89   AVKILEEKCERVIAELS 39
            AVK+LE+KCERVI ELS
Sbjct: 356  AVKVLEDKCERVITELS 372


>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
            communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
            polymerase I/III subunits, putative [Ricinus communis]
          Length = 374

 Score =  524 bits (1349), Expect = e-146
 Identities = 265/375 (70%), Positives = 304/375 (81%)
 Frame = -2

Query: 1163 KVSAFNMPDVPMGQLPPHLELQRTRVSCDKDAPTHTENVQSAGAYASVGVDNSLCLDQFR 984
            K S +++PDVPMGQLPPHL+LQRTRV C  DAP HT+N+  +GAYAS+GVDNSL LD FR
Sbjct: 13   KFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCFR 72

Query: 983  KNFRVTVVRLTEDDMEFDMIGIDPSIANAFRRILISEVPTMAIEKVLIKNSTTLVQDEVL 804
             NF+V V++LT+DDMEFDMIGID +IANAFRRILISE+PTMAIEKVLI N+T+L+QDEVL
Sbjct: 73   DNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANNTSLIQDEVL 132

Query: 803  AHRLGLIPIKADPRFFEYTSXXXXXXXXXXXNTIVFKLHAKCERGKPRLPVKSDQLKWLP 624
            AHRLGLIPI ADPR FEY S            TIVFKLHA C+RG+PR  V S++LKWLP
Sbjct: 133  AHRLGLIPINADPRLFEYLSANDTPNEKN---TIVFKLHASCKRGEPRRTVYSEELKWLP 189

Query: 623  GGSEFEVEKPSGPDSTPETSAKKTYTNFTCNQASMPQFANNPIVPKHPDIIISKLGPGQE 444
            GGS+   E     DS P T     YT+FT  Q  +P+    P+ P    II++KLGPGQE
Sbjct: 190  GGSQLLKESEKA-DSKPST-----YTSFTDKQDFIPK----PVSPSEDKIIVAKLGPGQE 239

Query: 443  IELEAHAVKGMGKTHAKWSPVSTAWYRMLPEVVLLQDIEDELAVELVKKCPAKVFDIEDL 264
            IELEAHAVKG+GKTHAKWSPV+TAWYRMLPEVVLL+DIEDE+A EL KKCP  VFDIED+
Sbjct: 240  IELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIEDI 299

Query: 263  GKGKKKATVARPRSCTLCRECIREENWEKRVSLRRVKDHFIFTIESSGALPPEELFTEAV 84
            G GKK+ATVARPR+CTLCRECIR   W+KRVSLRRVKDHFIFTIES+GALPPE LFTEAV
Sbjct: 300  GNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTEAV 359

Query: 83   KILEEKCERVIAELS 39
            K+LE+KCERVI ELS
Sbjct: 360  KVLEDKCERVITELS 374


>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Cucumis sativus] gi|449522768|ref|XP_004168398.1|
            PREDICTED: DNA-directed RNA polymerases I and III subunit
            RPAC1-like [Cucumis sativus]
          Length = 391

 Score =  515 bits (1326), Expect = e-143
 Identities = 260/371 (70%), Positives = 304/371 (81%), Gaps = 1/371 (0%)
 Frame = -2

Query: 1148 NMPDVPMGQLPPHLELQRTRVSCDKDAPTHTENVQSAGAYASVGVDNSLCLDQFRKNFRV 969
            N+PDVPM +LPPH+ELQRTRV C  DAP HT+ +Q +GA+AS+G DNSL LD FR NF++
Sbjct: 31   NLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKI 89

Query: 968  TVVRLTEDDMEFDMIGIDPSIANAFRRILISEVPTMAIEKVLIKNSTTLVQDEVLAHRLG 789
             V+ L EDD+EFDMIGIDP++ANAFRRILISEVPTMAIEKVL  N+T++VQDEVLAHRLG
Sbjct: 90   EVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHRLG 149

Query: 788  LIPIKADPRFFEYTSXXXXXXXXXXXNTIVFKLHAKCERGKPRLPVKSDQLKWLPGGSEF 609
            L+PI+ DPR F+Y+            NTIVF+LHA CERGKPRL V S  L WLP GSEF
Sbjct: 150  LVPIRVDPRLFKYSD----KDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEF 205

Query: 608  EVEKPSGPDSTPETSAKKTYTNFTCNQASM-PQFANNPIVPKHPDIIISKLGPGQEIELE 432
                P   D +   S  KTYT+F+C+Q ++  +F+NNPI PK  DII+++LGPGQEIELE
Sbjct: 206  ----PLVSDKSVSNSKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELE 261

Query: 431  AHAVKGMGKTHAKWSPVSTAWYRMLPEVVLLQDIEDELAVELVKKCPAKVFDIEDLGKGK 252
            AHAVKGMGKTHAKWSPV+TAWYRMLPEVVL+++IEDELA EL KKCP  VFDIED+  GK
Sbjct: 262  AHAVKGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDIA-GK 320

Query: 251  KKATVARPRSCTLCRECIREENWEKRVSLRRVKDHFIFTIESSGALPPEELFTEAVKILE 72
            K+ATVARPR CTLCRECIR + WEKRV+LRRVKDHFIF IES+GALPPE LFTEAVKILE
Sbjct: 321  KRATVARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILE 380

Query: 71   EKCERVIAELS 39
            +KCER+IAELS
Sbjct: 381  DKCERLIAELS 391


>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Glycine max]
          Length = 393

 Score =  498 bits (1283), Expect = e-138
 Identities = 253/372 (68%), Positives = 300/372 (80%), Gaps = 2/372 (0%)
 Frame = -2

Query: 1148 NMPDVPMGQLPPHLELQRTRVSCDKDAPTHTENVQSAGAYASVGVDNSLCLDQFRKNFRV 969
            ++ +VP  +LPPHLEL +TRV C+ DAP HT+ VQ +GAYA +GVDNS+ LD F +NF+V
Sbjct: 30   SLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCENFKV 88

Query: 968  TVVRLTEDDMEFDMIGIDPSIANAFRRILISEVPTMAIEKVLIKNSTTLVQDEVLAHRLG 789
             V RLT+ D+EFDMIGIDP+IANAFRRILI+EVPTMAIE+V I N+T++VQDEVL+HRLG
Sbjct: 89   EVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRLG 148

Query: 788  LIPIKADPRFFEYTSXXXXXXXXXXXNTIVFKLHAKCERGKPRLPVKSDQLKWLPGGSEF 609
            LIPI+ADPR FEY              TIVFKLH +C+ G+PR+ VKSD+LKWLP GSE 
Sbjct: 149  LIPIRADPRLFEYPENAGDDKNEKN--TIVFKLHVRCQVGQPRITVKSDKLKWLPNGSEL 206

Query: 608  EVEKPSGPDSTPETSAK-KTYTNFTCNQASMPQFANNPIVPKHPDIIISKLGPGQEIELE 432
              E     D  P   +K KT+T+FTC+Q S+P+F+NN I   + DII++KLGPGQEIELE
Sbjct: 207  PCE-----DVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELE 261

Query: 431  AHAVKGMGKTHAKWSPVSTAWYRMLPEVVLLQDIEDELAVELVKKCPAKVFDIEDLGKGK 252
            AHAVKG GKTHAKWSPV+T WYRMLPEVVLL+D+EDELA EL  KCP  VFDIED+GKGK
Sbjct: 262  AHAVKGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCPVNVFDIEDIGKGK 321

Query: 251  KKATVARPRSCTLCRECIR-EENWEKRVSLRRVKDHFIFTIESSGALPPEELFTEAVKIL 75
            ++A VARPR CTLCRECIR  + WE RVSLRRVK+HFIFTIES+GALPPE LFTEAVKIL
Sbjct: 322  RRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKIL 381

Query: 74   EEKCERVIAELS 39
            E+KCERVI ELS
Sbjct: 382  EDKCERVITELS 393


>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
            gi|255637183|gb|ACU18922.1| unknown [Glycine max]
          Length = 388

 Score =  496 bits (1277), Expect = e-138
 Identities = 253/373 (67%), Positives = 301/373 (80%), Gaps = 3/373 (0%)
 Frame = -2

Query: 1148 NMPDVPMGQLPPHLELQRTRVSCDKDAPTHTENVQSAGAYASVGVDNSLCLDQFRKNFRV 969
            ++ +VP  +LPPHLEL +TRV C+ DAP HT+ VQ +GAYA +GVDNS+ LD F +NF+V
Sbjct: 25   SLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILGVDNSVRLDSFCENFKV 83

Query: 968  TVVRLTEDDMEFDMIGIDPSIANAFRRILISEVPTMAIEKVLIKNSTTLVQDEVLAHRLG 789
             V RLT+ D+EFDMIGIDP+IANAFRRILI+EVPTMAIE+V I N+T++VQDEVL+HRLG
Sbjct: 84   EVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRLG 143

Query: 788  LIPIKADPRFFEYTSXXXXXXXXXXXNTIVFKLHAKCERGKPRLPVKSDQLKWLPGGSEF 609
            LIPI+ADPR FEY              TIVFKLH +C+ G+PR+ VKSD+LKWLP GSE 
Sbjct: 144  LIPIRADPRLFEYPENAGDDKNEKN--TIVFKLHVRCQVGQPRITVKSDKLKWLPNGSEL 201

Query: 608  EVE--KPSGPDSTPETSAKKTYTNFTCNQASMPQFANNPIVPKHPDIIISKLGPGQEIEL 435
              E  KP+        S  KT+T+FTC+Q S+P+F+NN I   + DII++KLGPGQEIEL
Sbjct: 202  PCEGVKPNAG------SKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIEL 255

Query: 434  EAHAVKGMGKTHAKWSPVSTAWYRMLPEVVLLQDIEDELAVELVKKCPAKVFDIEDLGKG 255
            EAHAVKG+GKTHAKWSPV+TAWYRMLPEVVLL+ +EDELA EL  KCP  VFDIED+GKG
Sbjct: 256  EAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKG 315

Query: 254  KKKATVARPRSCTLCRECIR-EENWEKRVSLRRVKDHFIFTIESSGALPPEELFTEAVKI 78
            K++A VARPR CTLCRECIR  + WE RVSLRRVK+HFIFTIES+GALPPE LFTEAVKI
Sbjct: 316  KRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKI 375

Query: 77   LEEKCERVIAELS 39
            LE+KCERVI ELS
Sbjct: 376  LEDKCERVITELS 388


Top