BLASTX nr result

ID: Papaver22_contig00008934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00008934
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   237   4e-60
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   125   2e-26
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi...    83   1e-21
emb|CBA31938.1| hypothetical protein Csp_D29620 [Curvibacter put...    93   8e-17
ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lacto...    88   3e-15

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
            gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
            [Medicago truncatula]
          Length = 1116

 Score =  237 bits (604), Expect = 4e-60
 Identities = 121/145 (83%), Positives = 124/145 (85%), Gaps = 6/145 (4%)
 Frame = -3

Query: 574  YRGCWHGVSRGFFLESCHDRALDERA*QAKLPFCTHAILLDQACAHCPRFPTAAPRGSPG 395
            YRGCWHGVSRGFFLESCHDRALDERA QA LPF THAILLD+A AHCPRFPTAAPRGSPG
Sbjct: 935  YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 994

Query: 394  RVSVPVWLIIRKDQLSIIGLVSLYSTNYLILRGLIKERFLA*FRI*PELFGRFPRVTHPF 215
            RVSVPVWLIIRKDQLSIIGLVSLY TNYLILR LIK+RFLA FRI PELFGRFPR+THPF
Sbjct: 995  RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPF 1054

Query: 214  ATLFST------HQLKR*LGADLPS 158
            ATLFST       Q    LGA  PS
Sbjct: 1055 ATLFSTVPTSWARQATFTLGASFPS 1079



 Score = 75.5 bits (184), Expect(2) = 3e-16
 Identities = 36/39 (92%), Positives = 36/39 (92%)
 Frame = -3

Query: 877  TKGEHSSFTAWTTRVSNPVCSPCFRTSASVETQRAAFAF 761
            TKGEHSSFTAWTTRVSNPV SPCFRT ASV TQRAAFAF
Sbjct: 889  TKGEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF 927



 Score = 36.2 bits (82), Expect(2) = 3e-16
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -1

Query: 960 PVNSFEFRSCDRTPQAE 910
           PVNSFEFRSCDRTP+ +
Sbjct: 874 PVNSFEFRSCDRTPETK 890


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score =  125 bits (313), Expect = 2e-26
 Identities = 73/127 (57%), Positives = 81/127 (63%), Gaps = 6/127 (4%)
 Frame = +3

Query: 120 TCKSNVVFGELEKEGRSAPSYLFS**------VENKVANGCVTRGNLPKSSG*ILNQARK 281
           T  S  +F     EG+ APS   +        VENKVANGCV RGNLP SSG IL +A+K
Sbjct: 97  THASRTLFSGSWAEGKEAPSVKVACLAQEVGTVENKVANGCVMRGNLPNSSGQILKKAKK 156

Query: 282 RSLMSPRSIR*LVE*RLTKPMMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAQA*SSN 461
                           LTKPMMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWA+A SSN
Sbjct: 157 ----------------LTKPMMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSN 200

Query: 462 MA*VQKG 482
           +  +  G
Sbjct: 201 ICAIMTG 207



 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 39/48 (81%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
 Frame = +3

Query: 753 GRPKAKAALWVSTDADVRKHGEQTGLDTLVVHAVNDECSPLVQI-RGP 893
           G PKAKAALWV TDA VRKH E+TGLDTLVVHAVNDECSPLV + +GP
Sbjct: 240 GTPKAKAALWVPTDAGVRKHRERTGLDTLVVHAVNDECSPLVYVDQGP 287



 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 38/50 (76%), Positives = 41/50 (82%)
 Frame = +2

Query: 479 GQFRLSSSFVECAIMT*LEEEAPANSVPAAAVIRGGRVFFRMTGRKGHVG 628
           GQ+  + S   CAIMT LEEEAPANSVPAAAV RGG+VFF MTGRKGHVG
Sbjct: 191 GQWAKARSSNICAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGRKGHVG 240



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
 Frame = +1

Query: 76  EFDPGSERTLAICLTHASRTLFSGSWK--KKEDQLLAISLADELRT 207
           EFDPGSE TLAICLTHASRTLFSGSW   K+   +    LA E+ T
Sbjct: 83  EFDPGSEGTLAICLTHASRTLFSGSWAEGKEAPSVKVACLAQEVGT 128


>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
           gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
           jensenii 269-3]
          Length = 174

 Score = 83.2 bits (204), Expect(2) = 1e-21
 Identities = 55/121 (45%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
 Frame = -3

Query: 655 RLSLSTR*TAYVPFTXXXXXXXXXXPYYRGCWHGVSRGFFLESCHDRA---LDERA*QAK 485
           RLS  T  +A   FT           YYRGCWH VSR F ++    +A   L   +   +
Sbjct: 54  RLSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTE 113

Query: 484 L----PFCTHAILLDQACAHCPRFPTAAPRGSPGRVSVPVWLIIRKDQLSIIGLVSLYST 317
           L     F THA LL Q   HC RFPTAA R S GRVSVP+W I    +L II LVS Y T
Sbjct: 114 LYDPKTFFTHAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLT 173

Query: 316 N 314
           N
Sbjct: 174 N 174



 Score = 47.0 bits (110), Expect(2) = 1e-21
 Identities = 25/48 (52%), Positives = 30/48 (62%)
 Frame = -2

Query: 812 MLSHISVGRDPESCLRFWPSFVDLRISPLHTKFHSPLSYPSSLVSKAI 669
           MLS +SV   PES LR W S + LRI PLH +F SPL +    VS A+
Sbjct: 1   MLSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAV 48


>emb|CBA31938.1| hypothetical protein Csp_D29620 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 57

 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = -3

Query: 469 HAILLDQACAHCPRFPTAAPRGSPGRVSVPVWLIIRKDQLSIIGLVSLYSTNYLI 305
           HA LLDQACAHCP+FPTAA R S GRVSVPVWL++  DQL I+GLVSLY TNYLI
Sbjct: 3   HAALLDQACAHCPKFPTAASRRSLGRVSVPVWLVVLSDQLQIVGLVSLYLTNYLI 57


>ref|YP_003600533.1| pg1 protein, homology to Homo sapiens [Lactobacillus crispatus ST1]
           gi|295692302|ref|YP_003600912.1| pg1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
           gi|295692314|ref|YP_003600924.1| pg1 protein, homology
           to Homo sapiens [Lactobacillus crispatus ST1]
           gi|295030029|emb|CBL49508.1| PG1 protein, homology to
           Homo sapiens [Lactobacillus crispatus ST1]
           gi|295030408|emb|CBL49887.1| PG1 protein, homology to
           Homo sapiens [Lactobacillus crispatus ST1]
           gi|295030420|emb|CBL49899.1| PG1 protein, homology to
           Homo sapiens [Lactobacillus crispatus ST1]
          Length = 144

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 56/120 (46%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
 Frame = -3

Query: 652 LSLSTR*TAYVPFTXXXXXXXXXXPYYRGCWHGVSRGFFLESCHDRA---LDERA*QAKL 482
           LS  T  +A   FT           YYRGCWH VSR F ++    +A   L   +   +L
Sbjct: 25  LSHQTYSSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTEL 84

Query: 481 ----PFCTHAILLDQACAHCPRFPTAAPRGSPGRVSVPVWLIIRKDQLSIIGLVSLYSTN 314
                F THA LL Q C HC RFPTAA R S GRVSVP+W I    +L II LVSLY TN
Sbjct: 85  YDPKTFFTHAALLHQTCVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSLYLTN 144


Top