BLASTX nr result

ID: Papaver22_contig00008904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00008904
         (2319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062369.1| Os08g0538000 [Oryza sativa Japonica Group] g...    52   2e-09
ref|XP_003574845.1| PREDICTED: glycyl-tRNA synthetase 1, mitocho...    50   7e-09
ref|XP_004170329.1| PREDICTED: LOW QUALITY PROTEIN: glycine--tRN...    50   9e-09
ref|XP_004152844.1| PREDICTED: glycine--tRNA ligase 1, mitochond...    50   9e-09
ref|XP_002297878.1| predicted protein [Populus trichocarpa] gi|2...    48   2e-08

>ref|NP_001062369.1| Os08g0538000 [Oryza sativa Japonica Group]
           gi|38175549|dbj|BAD01242.1| putative glycyl-tRNA
           synthetase [Oryza sativa Japonica Group]
           gi|113624338|dbj|BAF24283.1| Os08g0538000 [Oryza sativa
           Japonica Group] gi|125562356|gb|EAZ07804.1| hypothetical
           protein OsI_30061 [Oryza sativa Indica Group]
           gi|125604166|gb|EAZ43491.1| hypothetical protein
           OsJ_28106 [Oryza sativa Japonica Group]
          Length = 698

 Score = 51.6 bits (122), Expect(3) = 2e-09
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 5/49 (10%)
 Frame = +1

Query: 847 KLDKDLSLSIYKVQEIKHVLVMLDD-----IGS*IKKDQIVAPDTKNPV 978
           KL+KDL+LS  K  E+KHVL +LDD     +G+ IK+  IVAPDTKNP+
Sbjct: 189 KLEKDLTLSPEKAAELKHVLAVLDDLSADELGAKIKEYGIVAPDTKNPL 237



 Score = 35.8 bits (81), Expect(3) = 2e-09
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3

Query: 768 KNLTDLLVKDGKT*TCYHADQLLK 839
           +  TDL+VKD KT TCY AD LLK
Sbjct: 160 EKFTDLMVKDEKTGTCYRADHLLK 183



 Score = 22.3 bits (46), Expect(3) = 2e-09
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 734 PEVVLKASDHL*K 772
           PEVVLKAS H+ K
Sbjct: 149 PEVVLKASGHVEK 161


>ref|XP_003574845.1| PREDICTED: glycyl-tRNA synthetase 1, mitochondrial-like
           [Brachypodium distachyon]
          Length = 691

 Score = 50.1 bits (118), Expect(3) = 7e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 5/49 (10%)
 Frame = +1

Query: 847 KLDKDLSLSIYKVQEIKHVLVMLDD-----IGS*IKKDQIVAPDTKNPV 978
           KL+KDL+LS  K  E KHVL +LDD     +G+ IK   IVAPDTKNP+
Sbjct: 182 KLEKDLTLSPEKAAEFKHVLAVLDDLSPEELGAKIKDYGIVAPDTKNPL 230



 Score = 35.8 bits (81), Expect(3) = 7e-09
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3

Query: 768 KNLTDLLVKDGKT*TCYHADQLLK 839
           +  TDL+VKD KT TCY AD LLK
Sbjct: 153 EKFTDLMVKDEKTGTCYRADHLLK 176



 Score = 21.9 bits (45), Expect(3) = 7e-09
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 734 PEVVLKASDHL*K 772
           PE+VLKAS H+ K
Sbjct: 142 PEIVLKASGHVEK 154


>ref|XP_004170329.1| PREDICTED: LOW QUALITY PROTEIN: glycine--tRNA ligase 1,
           mitochondrial-like [Cucumis sativus]
          Length = 729

 Score = 49.7 bits (117), Expect(3) = 9e-09
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 5/49 (10%)
 Frame = +1

Query: 847 KLDKDLSLSIYKVQEIKHVLVMLDD-----IGS*IKKDQIVAPDTKNPV 978
           KL KDLS+S  K  E+KH+L +LDD     +G+ IK+  I APDTKNP+
Sbjct: 221 KLQKDLSISSEKAAELKHILAVLDDLSADQLGAKIKEYGITAPDTKNPL 269



 Score = 35.4 bits (80), Expect(3) = 9e-09
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 777 TDLLVKDGKT*TCYHADQLLK 839
           TDL+VKD KT TCY AD LLK
Sbjct: 195 TDLMVKDEKTGTCYRADHLLK 215



 Score = 22.3 bits (46), Expect(3) = 9e-09
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 734 PEVVLKASDHL*K 772
           PEVVLKAS H+ K
Sbjct: 181 PEVVLKASGHVDK 193


>ref|XP_004152844.1| PREDICTED: glycine--tRNA ligase 1, mitochondrial-like [Cucumis
           sativus]
          Length = 729

 Score = 49.7 bits (117), Expect(3) = 9e-09
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 5/49 (10%)
 Frame = +1

Query: 847 KLDKDLSLSIYKVQEIKHVLVMLDD-----IGS*IKKDQIVAPDTKNPV 978
           KL KDLS+S  K  E+KH+L +LDD     +G+ IK+  I APDTKNP+
Sbjct: 221 KLQKDLSISSEKAAELKHILAVLDDLSADQLGAKIKEYGITAPDTKNPL 269



 Score = 35.4 bits (80), Expect(3) = 9e-09
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 777 TDLLVKDGKT*TCYHADQLLK 839
           TDL+VKD KT TCY AD LLK
Sbjct: 195 TDLMVKDEKTGTCYRADHLLK 215



 Score = 22.3 bits (46), Expect(3) = 9e-09
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 734 PEVVLKASDHL*K 772
           PEVVLKAS H+ K
Sbjct: 181 PEVVLKASGHVDK 193


>ref|XP_002297878.1| predicted protein [Populus trichocarpa] gi|222845136|gb|EEE82683.1|
           predicted protein [Populus trichocarpa]
          Length = 690

 Score = 48.1 bits (113), Expect(3) = 2e-08
 Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
 Frame = +1

Query: 847 KLDKDLSLSIYKVQEIKHVLVMLDD-----IGS*IKKDQIVAPDTKNPV 978
           K+ KDL +S  K  E+KHVL +LDD     +G+ IK+  I APDTKNP+
Sbjct: 182 KIQKDLGISAEKAAELKHVLAVLDDLSAEELGAKIKEYGITAPDTKNPL 230



 Score = 35.4 bits (80), Expect(3) = 2e-08
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 777 TDLLVKDGKT*TCYHADQLLK 839
           TDL+VKD KT TCY AD LLK
Sbjct: 156 TDLMVKDEKTGTCYRADHLLK 176



 Score = 22.3 bits (46), Expect(3) = 2e-08
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 734 PEVVLKASDHL*K 772
           PEVVLKAS H+ K
Sbjct: 142 PEVVLKASGHVDK 154


Top