BLASTX nr result

ID: Papaver22_contig00008574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00008574
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   122   9e-26
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact...   122   9e-26
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ...   120   3e-25
ref|XP_002327417.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-25
emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]   120   3e-25

>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  122 bits (305), Expect = 9e-26
 Identities = 54/65 (83%), Positives = 59/65 (90%)
 Frame = +3

Query: 3    MVPDSGSWNYNFNGVKHNTNLKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGDNMAEGDR 182
            M+PD+G WNYNF GVKH  ++KYGIKLGTPREYYHEDHRPTHFLEFSNLEEG+ MAEGDR
Sbjct: 2304 MIPDNGPWNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGE-MAEGDR 2362

Query: 183  EDKFT 197
            ED FT
Sbjct: 2363 EDTFT 2367


>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
            [Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
            protein product [Vitis vinifera]
          Length = 2347

 Score =  122 bits (305), Expect = 9e-26
 Identities = 54/65 (83%), Positives = 59/65 (90%)
 Frame = +3

Query: 3    MVPDSGSWNYNFNGVKHNTNLKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGDNMAEGDR 182
            M+PD+G WNYNF GVKH  ++KYGIKLGTPREYYHEDHRPTHFLEFSNLEEG+ MAEGDR
Sbjct: 2284 MIPDNGPWNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGE-MAEGDR 2342

Query: 183  EDKFT 197
            ED FT
Sbjct: 2343 EDTFT 2347


>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
            gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
            factor, putative [Ricinus communis]
          Length = 2376

 Score =  120 bits (301), Expect = 3e-25
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = +3

Query: 3    MVPDSGSWNYNFNGVKHNTNLKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGDNMAEGDR 182
            MVPD+G WNYNF GVKH  ++KYGIKLGTPREYYHEDHRPTHFLEFSNLEEG+  AEGDR
Sbjct: 2313 MVPDNGPWNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGET-AEGDR 2371

Query: 183  EDKFT 197
            ED FT
Sbjct: 2372 EDTFT 2376


>ref|XP_002327417.1| predicted protein [Populus trichocarpa] gi|222835971|gb|EEE74392.1|
            predicted protein [Populus trichocarpa]
          Length = 2357

 Score =  120 bits (300), Expect = 3e-25
 Identities = 53/65 (81%), Positives = 58/65 (89%)
 Frame = +3

Query: 3    MVPDSGSWNYNFNGVKHNTNLKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGDNMAEGDR 182
            M+PD+G WNYNF GVKH  ++KYGIKLGTPREYYHEDHRPTHFLEFSNLEEG+  AEGDR
Sbjct: 2294 MIPDNGPWNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGET-AEGDR 2352

Query: 183  EDKFT 197
            ED FT
Sbjct: 2353 EDTFT 2357


>emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]
          Length = 2294

 Score =  120 bits (300), Expect = 3e-25
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = +3

Query: 6    VPDSGSWNYNFNGVKHNTNLKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGDNMAEGDRE 185
            +PD+G WNYNF GVKH  ++KYGIKLGTPREYYHEDHRPTHFLEFSNLEEG+ MAEGDRE
Sbjct: 2232 IPDNGPWNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGE-MAEGDRE 2290

Query: 186  DKFT 197
            D FT
Sbjct: 2291 DTFT 2294


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