BLASTX nr result
ID: Papaver22_contig00008163
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00008163
(534 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei... 91 1e-33
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei... 91 1e-33
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ... 96 8e-33
ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 ... 96 8e-33
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ... 88 7e-32
>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
BMS1-like protein [Medicago truncatula]
Length = 1200
Score = 91.3 bits (225), Expect(2) = 1e-33
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 11/126 (8%)
Frame = -3
Query: 424 LSCMDSVEVTRFFNPLTTALQPLDR----IKLVAKLQQEHNFPIPLNEDSLYKPIEWKPR 257
L VEV +F+NPLTTALQP D+ ++ VA+L++EHN PIP+N+DSLYK IE KPR
Sbjct: 1002 LRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRREHNLPIPVNKDSLYKKIERKPR 1061
Query: 256 KFDLMVIPKALQLYKLYSHLTCRKKKLGKLHAEFR-------EPRQRKVCFCTQLQVLKK 98
KF+ +VIPK+LQ + K +L + R EPR+RK+ Q L K
Sbjct: 1062 KFNPLVIPKSLQANLPFESKPKHTPKRKRLSFDDRRQKGVVVEPRERKIHALVQHLQLMK 1121
Query: 97 LVKMER 80
K+++
Sbjct: 1122 TEKIKK 1127
Score = 77.4 bits (189), Expect(2) = 1e-33
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = -1
Query: 531 AKEELGNRPKRKGGQV*EGIARCTFEDRILMSDVVLFRAWTQ 406
AKEE+GN+PKRKGGQ+ EGIARCTFED+ILMSD+V RAWTQ
Sbjct: 966 AKEEIGNQPKRKGGQIKEGIARCTFEDKILMSDIVFLRAWTQ 1007
>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
BMS1-like protein [Medicago truncatula]
Length = 1175
Score = 91.3 bits (225), Expect(2) = 1e-33
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 11/126 (8%)
Frame = -3
Query: 424 LSCMDSVEVTRFFNPLTTALQPLDR----IKLVAKLQQEHNFPIPLNEDSLYKPIEWKPR 257
L VEV +F+NPLTTALQP D+ ++ VA+L++EHN PIP+N+DSLYK IE KPR
Sbjct: 1002 LRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRREHNLPIPVNKDSLYKKIERKPR 1061
Query: 256 KFDLMVIPKALQLYKLYSHLTCRKKKLGKLHAEFR-------EPRQRKVCFCTQLQVLKK 98
KF+ +VIPK+LQ + K +L + R EPR+RK+ Q L K
Sbjct: 1062 KFNPLVIPKSLQANLPFESKPKHTPKRKRLSFDDRRQKGVVVEPRERKIHALVQHLQLMK 1121
Query: 97 LVKMER 80
K+++
Sbjct: 1122 TEKIKK 1127
Score = 77.4 bits (189), Expect(2) = 1e-33
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = -1
Query: 531 AKEELGNRPKRKGGQV*EGIARCTFEDRILMSDVVLFRAWTQ 406
AKEE+GN+PKRKGGQ+ EGIARCTFED+ILMSD+V RAWTQ
Sbjct: 966 AKEEIGNQPKRKGGQIKEGIARCTFEDKILMSDIVFLRAWTQ 1007
>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis sativus]
Length = 1198
Score = 95.9 bits (237), Expect(2) = 8e-33
Identities = 60/124 (48%), Positives = 78/124 (62%), Gaps = 9/124 (7%)
Frame = -3
Query: 424 LSCMDSVEVTRFFNPLTTALQPLDRI----KLVAKLQQEHNFPIPLNEDSLYKPIEWKPR 257
L VEV +F+NPLTTALQP DR+ K VA+L++EHN PIPLN+DSLYKPIE + R
Sbjct: 1026 LRAWTKVEVPKFYNPLTTALQPRDRVWQGMKTVAELRKEHNLPIPLNKDSLYKPIERQKR 1085
Query: 256 KFDLMVIPKALQL---YKLYSHLTCRKKK--LGKLHAEFREPRQRKVCFCTQLQVLKKLV 92
KF+ +VIPK+LQ +K T +++ L K A EPR RKV Q L +
Sbjct: 1086 KFNPLVIPKSLQAALPFKSKPKNTPGQQRPLLEKRRAVVMEPRDRKVHALVQQLQLMRHE 1145
Query: 91 KMER 80
KM++
Sbjct: 1146 KMKK 1149
Score = 69.7 bits (169), Expect(2) = 8e-33
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -1
Query: 534 AAKEELGNRPKRKGGQV*EGIARCTFEDRILMSDVVLFRAWTQ 406
AAKEE+GN+PK+KGG EGIARCTFED+I MSD+V RAWT+
Sbjct: 989 AAKEEIGNQPKKKGGPPKEGIARCTFEDKIRMSDIVFLRAWTK 1031
>ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
sativus]
Length = 553
Score = 95.9 bits (237), Expect(2) = 8e-33
Identities = 60/124 (48%), Positives = 78/124 (62%), Gaps = 9/124 (7%)
Frame = -3
Query: 424 LSCMDSVEVTRFFNPLTTALQPLDRI----KLVAKLQQEHNFPIPLNEDSLYKPIEWKPR 257
L VEV +F+NPLTTALQP DR+ K VA+L++EHN PIPLN+DSLYKPIE + R
Sbjct: 381 LRAWTKVEVPKFYNPLTTALQPRDRVWQGMKTVAELRKEHNLPIPLNKDSLYKPIERQKR 440
Query: 256 KFDLMVIPKALQL---YKLYSHLTCRKKK--LGKLHAEFREPRQRKVCFCTQLQVLKKLV 92
KF+ +VIPK+LQ +K T +++ L K A EPR RKV Q L +
Sbjct: 441 KFNPLVIPKSLQAALPFKSKPKNTPGQQRPLLEKRRAVVMEPRDRKVHALVQQLQLMRHE 500
Query: 91 KMER 80
KM++
Sbjct: 501 KMKK 504
Score = 69.7 bits (169), Expect(2) = 8e-33
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -1
Query: 534 AAKEELGNRPKRKGGQV*EGIARCTFEDRILMSDVVLFRAWTQ 406
AAKEE+GN+PK+KGG EGIARCTFED+I MSD+V RAWT+
Sbjct: 344 AAKEEIGNQPKKKGGPPKEGIARCTFEDKIRMSDIVFLRAWTK 386
>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
Length = 1181
Score = 87.8 bits (216), Expect(2) = 7e-32
Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 11/109 (10%)
Frame = -3
Query: 424 LSCMDSVEVTRFFNPLTTALQPLDR----IKLVAKLQQEHNFPIPLNEDSLYKPIEWKPR 257
L VEV +F+NPLTTALQP D ++ VA+L++EHN PIP+N+DSLYK IE KPR
Sbjct: 1006 LRAWTQVEVPQFYNPLTTALQPRDMTWKGMRTVAELRREHNLPIPVNKDSLYKKIERKPR 1065
Query: 256 KFDLMVIPKALQLYKLYSHLTCRKKKLGKLHAEFR-------EPRQRKV 131
KF+ +VIPK+LQ ++ K K E R EPR+RKV
Sbjct: 1066 KFNPLVIPKSLQASLPFASKPKDISKRNKPLLEERRGRGVVMEPRERKV 1114
Score = 74.7 bits (182), Expect(2) = 7e-32
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = -1
Query: 534 AAKEELGNRPKRKGGQV*EGIARCTFEDRILMSDVVLFRAWTQ 406
AAKEE+GN+ KRKGGQ EGIARCTFED+ILMSD+V RAWTQ
Sbjct: 969 AAKEEIGNQAKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQ 1011