BLASTX nr result

ID: Papaver22_contig00007350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00007350
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...    66   5e-12
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...    66   9e-12
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...    66   9e-12
ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...    66   9e-12
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...    66   9e-12

>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 65.9 bits (159), Expect(2) = 5e-12
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +2

Query: 497  INYQKLKHMVLDKMHARGTGPKVMLTRQLTEGKSRDG 607
            I YQKLKHMVLDKMHARG GP+VMLTRQ TEG++R+G
Sbjct: 1009 IYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNG 1045



 Score = 30.4 bits (67), Expect(2) = 5e-12
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 441  FFYFYKDVMYSGITGSPLQ 497
            F Y  KD++YSGITG PLQ
Sbjct: 983  FSYNGKDIIYSGITGCPLQ 1001


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1166

 Score = 66.2 bits (160), Expect(2) = 9e-12
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +2

Query: 497  INYQKLKHMVLDKMHARGTGPKVMLTRQLTEGKSRDG 607
            I YQKLKHMVLDKMHARG+GP+VMLTRQ TEG++R+G
Sbjct: 1036 IYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNG 1072



 Score = 29.3 bits (64), Expect(2) = 9e-12
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 399  DRVVVCGSLVTLLIFFYFYKDVMYSGITGSPLQ 497
            D+V      +    F Y  KD +YSGITG PLQ
Sbjct: 996  DKVETISETLVSKGFNYSGKDFIYSGITGCPLQ 1028


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 66.2 bits (160), Expect(2) = 9e-12
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +2

Query: 497  INYQKLKHMVLDKMHARGTGPKVMLTRQLTEGKSRDG 607
            I YQKLKHMVLDKMHARG+GP+VMLTRQ TEG++R+G
Sbjct: 1028 IYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNG 1064



 Score = 29.3 bits (64), Expect(2) = 9e-12
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 441  FFYFYKDVMYSGITGSPLQ 497
            F Y  KD +YSGITG PLQ
Sbjct: 1002 FSYNGKDFLYSGITGCPLQ 1020


>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1152

 Score = 66.2 bits (160), Expect(2) = 9e-12
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +2

Query: 497  INYQKLKHMVLDKMHARGTGPKVMLTRQLTEGKSRDG 607
            I YQKLKHMVLDKMHARG+GP+VMLTRQ TEG++R+G
Sbjct: 1022 IYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNG 1058



 Score = 29.3 bits (64), Expect(2) = 9e-12
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 399  DRVVVCGSLVTLLIFFYFYKDVMYSGITGSPLQ 497
            D+V      +    F Y  KD +YSGITG PLQ
Sbjct: 982  DKVETISETLVSKGFNYSGKDFIYSGITGCPLQ 1014


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 66.2 bits (160), Expect(2) = 9e-12
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +2

Query: 497  INYQKLKHMVLDKMHARGTGPKVMLTRQLTEGKSRDG 607
            I YQKLKHMVLDKMHARG+GP+VMLTRQ TEG++R+G
Sbjct: 1012 IYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNG 1048



 Score = 29.3 bits (64), Expect(2) = 9e-12
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 441  FFYFYKDVMYSGITGSPLQ 497
            F Y  KD +YSGITG PLQ
Sbjct: 986  FSYSGKDFIYSGITGCPLQ 1004


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