BLASTX nr result

ID: Papaver22_contig00006917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006917
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q43831.1|RUBB_SECCE RecName: Full=RuBisCO large subunit-bindi...   266   2e-69
ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata] gi...   261   3e-68
dbj|BAH20275.1| AT1G55490 [Arabidopsis thaliana]                      261   3e-68
ref|NP_175945.1| RuBisCO large subunit-binding protein subunit b...   261   3e-68
ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chl...   261   4e-68

>sp|Q43831.1|RUBB_SECCE RecName: Full=RuBisCO large subunit-binding protein subunit beta,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           beta; AltName: Full=CPN-60 beta
           gi|1167858|emb|CAA93139.1| chaperonin [Secale cereale]
          Length = 499

 Score =  266 bits (679), Expect = 2e-69
 Identities = 139/158 (87%), Positives = 146/158 (92%)
 Frame = -1

Query: 475 QIRNLIEAAEQDYEKEKLNERVAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAX 296
           QI+NLIEAAEQDYEKEKLNER+AKL+GGVAVIQVGAQTETELKEKKLRVEDALNATKAA 
Sbjct: 301 QIKNLIEAAEQDYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAV 360

Query: 295 XXXXXXXXGCTLLRLASKVDAIKLTLDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVV 116
                   GCTLLRLA+KVDAIK TL+NDEQKVGAEIVRRALCYPLKLIAKNAG NGSVV
Sbjct: 361 EEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALCYPLKLIAKNAGVNGSVV 420

Query: 115 MEKVLSNDNYKFGYNAATGKYEDLMAAGIIDPTKVVRC 2
            EKVLSNDN+KFGYNAATG+YEDLMAAGIIDPTKVVRC
Sbjct: 421 TEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRC 458


>ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata]
           gi|297340348|gb|EFH70765.1| CPN60B [Arabidopsis lyrata
           subsp. lyrata]
          Length = 600

 Score =  261 bits (668), Expect = 3e-68
 Identities = 138/158 (87%), Positives = 143/158 (90%)
 Frame = -1

Query: 475 QIRNLIEAAEQDYEKEKLNERVAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAX 296
           QI+NLIE AEQDYEKEKLNER+AKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA 
Sbjct: 402 QIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAV 461

Query: 295 XXXXXXXXGCTLLRLASKVDAIKLTLDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVV 116
                   GCTLLRLASKVDAIK TLDNDE+KVGA+IV+RAL YPLKLIAKNAG NGSVV
Sbjct: 462 EEGIVVGGGCTLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVV 521

Query: 115 MEKVLSNDNYKFGYNAATGKYEDLMAAGIIDPTKVVRC 2
            EKVLSNDN KFGYNAATGKYEDLMAAGIIDPTKVVRC
Sbjct: 522 SEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRC 559


>dbj|BAH20275.1| AT1G55490 [Arabidopsis thaliana]
          Length = 234

 Score =  261 bits (668), Expect = 3e-68
 Identities = 138/158 (87%), Positives = 143/158 (90%)
 Frame = -1

Query: 475 QIRNLIEAAEQDYEKEKLNERVAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAX 296
           QI+NLIE AEQDYEKEKLNER+AKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA 
Sbjct: 36  QIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAV 95

Query: 295 XXXXXXXXGCTLLRLASKVDAIKLTLDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVV 116
                   GCTLLRLASKVDAIK TLDNDE+KVGA+IV+RAL YPLKLIAKNAG NGSVV
Sbjct: 96  EEGIVVGGGCTLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVV 155

Query: 115 MEKVLSNDNYKFGYNAATGKYEDLMAAGIIDPTKVVRC 2
            EKVLSNDN KFGYNAATGKYEDLMAAGIIDPTKVVRC
Sbjct: 156 SEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRC 193


>ref|NP_175945.1| RuBisCO large subunit-binding protein subunit beta [Arabidopsis
           thaliana] gi|30695947|ref|NP_849811.1| RuBisCO large
           subunit-binding protein subunit beta [Arabidopsis
           thaliana] gi|27735252|sp|P21240.3|CPNB1_ARATH RecName:
           Full=Chaperonin 60 subunit beta 1, chloroplastic;
           Short=CPN-60 beta 1; AltName: Full=60 kDa chaperonin
           subunit beta 1; AltName: Full=RuBisCO large
           subunit-binding protein subunit beta, chloroplastic;
           Flags: Precursor gi|14423416|gb|AAK62390.1|AF386945_1
           Rubisco subunit binding-protein beta subunit
           [Arabidopsis thaliana] gi|4204266|gb|AAD10647.1| Rubisco
           subunit binding-protein beta subunit [Arabidopsis
           thaliana] gi|20148345|gb|AAM10063.1| Rubisco subunit
           binding-protein beta subunit [Arabidopsis thaliana]
           gi|222423239|dbj|BAH19596.1| AT1G55490 [Arabidopsis
           thaliana] gi|332195130|gb|AEE33251.1| RuBisCO large
           subunit-binding protein subunit beta [Arabidopsis
           thaliana] gi|332195131|gb|AEE33252.1| RuBisCO large
           subunit-binding protein subunit beta [Arabidopsis
           thaliana]
          Length = 600

 Score =  261 bits (668), Expect = 3e-68
 Identities = 138/158 (87%), Positives = 143/158 (90%)
 Frame = -1

Query: 475 QIRNLIEAAEQDYEKEKLNERVAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAX 296
           QI+NLIE AEQDYEKEKLNER+AKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA 
Sbjct: 402 QIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAV 461

Query: 295 XXXXXXXXGCTLLRLASKVDAIKLTLDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVV 116
                   GCTLLRLASKVDAIK TLDNDE+KVGA+IV+RAL YPLKLIAKNAG NGSVV
Sbjct: 462 EEGIVVGGGCTLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVV 521

Query: 115 MEKVLSNDNYKFGYNAATGKYEDLMAAGIIDPTKVVRC 2
            EKVLSNDN KFGYNAATGKYEDLMAAGIIDPTKVVRC
Sbjct: 522 SEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRC 559


>ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 599

 Score =  261 bits (667), Expect = 4e-68
 Identities = 137/158 (86%), Positives = 144/158 (91%)
 Frame = -1

Query: 475 QIRNLIEAAEQDYEKEKLNERVAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAX 296
           QI+NLIE AEQDYEKEKLNER+AKL+GGVAVIQVGAQTETELKEKKLRVEDALNATKAA 
Sbjct: 401 QIKNLIEVAEQDYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAV 460

Query: 295 XXXXXXXXGCTLLRLASKVDAIKLTLDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVV 116
                   GCTLLRLA+KVDAIK TL+N+EQKVGAEIVRRALCYPLKLIAKNAG NGSVV
Sbjct: 461 EEGIVVGGGCTLLRLAAKVDAIKDTLENEEQKVGAEIVRRALCYPLKLIAKNAGVNGSVV 520

Query: 115 MEKVLSNDNYKFGYNAATGKYEDLMAAGIIDPTKVVRC 2
            EKVLSNDN KFGYNAATG+YEDLMAAGIIDPTKVVRC
Sbjct: 521 TEKVLSNDNVKFGYNAATGQYEDLMAAGIIDPTKVVRC 558


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