BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006803
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    68   9e-10
ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S...    65   4e-09
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    65   4e-09
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    65   7e-09
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    64   1e-08

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/113 (29%), Positives = 61/113 (53%)
 Frame = -3

Query: 427 NNISVLCDNDGNWLKDRIDISNLLTNHFKTVASTSNPNFTDESFDVIPCILSETDNALLH 248
           N I+ L D +G W  +  DI N+  ++F+ + +T+NP   DE+   +  ++++  N LL 
Sbjct: 150 NRITGLHDENGIWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLT 209

Query: 247 VVPDDSEIFNVIKNMPAWSSPGPDGFQAGF*QTQWSLVGNDVIDVVKKFFQSG 89
               + E+   +  +    +PGPDG  A F Q  W+++ +D++ +V  F Q G
Sbjct: 210 ADATECEVRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEG 262


>ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
           gi|241916792|gb|EER89936.1| hypothetical protein
           SORBIDRAFT_10g022040 [Sorghum bicolor]
          Length = 1088

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
 Frame = -3

Query: 427 NNISVLCDNDGNWLKDRIDISNLLTNHFKTVASTSNPNFTDESFDVIPCILSETD--NAL 254
           N IS     DG++   +  ++ +  N+FK + ++   N   E    +  + +E    N  
Sbjct: 371 NTISHFIKPDGSYATTQSQLAKVANNYFKEIFTSDRDNRLREHSWAVQDLSTERMEINPF 430

Query: 253 LHVVPDDSEIFNVIKNMPAWSSPGPDGFQAGF*QTQWSLVGNDVIDVVKKFFQSGH 86
              VPD SEI  +IKNM + ++PGPDG  A F ++ W   G DV+++V  F+ + +
Sbjct: 431 TDSVPDSSEILAIIKNMRSNAAPGPDGLNAEFYKSSWEWTGKDVVNLVTDFYNNNY 486


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
 Frame = -3

Query: 427 NNISVLCDNDGNWLKDRIDISNLLTNHFKTVASTSNPNF----TDESFDVIPCILSETDN 260
           N+I  +   DG  +  + DI     N+F+    T   ++     +E  +++P   SE D+
Sbjct: 108 NSIREIVTRDGLVVTSQQDIQTEAVNYFQDFLQTIPADYEGMCVEELENLLPFRCSEDDH 167

Query: 259 ALLHVVPDDSEIFNVIKNMPAWSSPGPDGFQAGF*QTQWSLVGNDVIDVVKKFFQSGHPP 80
            LL  V    EI  VI +MP   SPGPDG+ + F +  W ++G++VI  ++ FF  G  P
Sbjct: 168 RLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLP 227

Query: 79  R 77
           +
Sbjct: 228 K 228


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/117 (28%), Positives = 65/117 (55%)
 Frame = -3

Query: 427 NNISVLCDNDGNWLKDRIDISNLLTNHFKTVASTSNPNFTDESFDVIPCILSETDNALLH 248
           N ++V+ D +G    +   IS +++ +F+ + ++ +        + I  ++S+ DN  L 
Sbjct: 261 NRLTVMEDINGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLT 320

Query: 247 VVPDDSEIFNVIKNMPAWSSPGPDGFQAGF*QTQWSLVGNDVIDVVKKFFQSGHPPR 77
            +P+D E+ + + ++ A  +PGPDGF AGF  + W ++  DV   ++ FF S + PR
Sbjct: 321 RIPNDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPR 377


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
 Frame = -3

Query: 427 NNISVLCDNDGNWLKDRIDISNLLTNHFKTVASTSNPNF-TDESFDVIPCILSETDNALL 251
           N IS L D D   + D   I   + N+F+ + S  N     D   D IP ++S  DN  L
Sbjct: 380 NTISFLQDGDAV-ITDPARIEVHVLNYFQAIFSVDNSCIQNDLVVDTIPSLVSNVDNNSL 438

Query: 250 HVVPDDSEIFNVIKNMPAWSSPGPDGFQAGF*QTQWSLVGNDVIDVVKKFFQSG 89
             +P   E+ N +  +    +PGP+GF   F QT W +VG DVI  V+ FF SG
Sbjct: 439 LRLPLWGEVKNAVFTLNGDGAPGPNGFGGHFYQTYWDIVGADVIQSVQDFFISG 492