BLASTX nr result

ID: Papaver22_contig00006744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006744
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro...   181   4e-44
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo...   179   3e-43
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   170   1e-40
ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Gly...   169   2e-40
ref|XP_002531375.1| RNA and export factor binding protein, putat...   168   4e-40

>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
           sativus]
          Length = 237

 Score =  181 bits (460), Expect = 4e-44
 Identities = 96/164 (58%), Positives = 113/164 (68%)
 Frame = +1

Query: 1   DTGSNKLYISNLDYGVSNEDIKELFSEVGEIQRYSVNYDRSGRSKGTAEVVFVRRSDAAA 180
           +TG+ KLY+SNLDYGVSNEDIKELFSEVG+++RYS+NYD+SGRSKGTAE+VF R++DA A
Sbjct: 84  ETGT-KLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALA 142

Query: 181 AVKRYNNVQLDGKPMKIEIVGASIAPPVFPAVNTAIFANPVGFPQXXXXXXXXXXXXXXX 360
           A+KRYNNVQLDGKPMK+EIVG +I  P  PA + A F NP GFP+               
Sbjct: 143 AIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPR---------GGRAMG 193

Query: 361 XXXXXXXXXXXXXXXXXXXXXEKVSATDLDADLDKYHTEAMQIN 492
                                EK+SA DLDADLDKYH EAMQIN
Sbjct: 194 RNRGGGRGRSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN 237


>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
           protein 2-like [Cucumis sativus]
          Length = 248

 Score =  179 bits (453), Expect = 3e-43
 Identities = 95/166 (57%), Positives = 112/166 (67%), Gaps = 2/166 (1%)
 Frame = +1

Query: 1   DTGSNKLYISNLDYGVSNEDIKELFSEVGEIQRYSVNYDRSGRSKGTAEVVFVRRSDAAA 180
           +TG+ KLY+SNLDYGVSNEDIKELFSEVG+++RYS+NYD+SGRSKGTAE+ F R++DA A
Sbjct: 84  ETGT-KLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIXFSRQADALA 142

Query: 181 AVKRYNNVQLDGKPMKIEIVGASIAPPVFPAVNTAIFANPVGFPQ--XXXXXXXXXXXXX 354
           A+KRYNNVQLDGKPMK+EIVG +I  P  PA + A F NP GFP+               
Sbjct: 143 AIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGR 202

Query: 355 XXXXXXXXXXXXXXXXXXXXXXXEKVSATDLDADLDKYHTEAMQIN 492
                                  EK+SA DLDADLDKYH EAMQIN
Sbjct: 203 GPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN 248


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  170 bits (431), Expect = 1e-40
 Identities = 98/165 (59%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
 Frame = +1

Query: 1   DTGSNKLYISNLDYGVSNEDIKELFSEVGEIQRYSVNYDRSGRSKGTAEVVFVRRSDAAA 180
           +TG+ KLYISNLDYGVSNEDIKELFSEVG+++RYS++YDRSGRSKGTAEVVF RR DA A
Sbjct: 84  ETGT-KLYISNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVA 142

Query: 181 AVKRYNNVQLDGKPMKIEIVGASIA-PPVFPAVNTAIFANPVGFPQXXXXXXXXXXXXXX 357
           AVKRYNNVQLDGKPMKIEIVG +IA P   P V    F N  G                 
Sbjct: 143 AVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGTFGNSNG----GLRSAQGRVGSQG 198

Query: 358 XXXXXXXXXXXXXXXXXXXXXXEKVSATDLDADLDKYHTEAMQIN 492
                                 EKVSA DLDADL+KYH+EAMQIN
Sbjct: 199 RPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQIN 243


>ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
          Length = 243

 Score =  169 bits (429), Expect = 2e-40
 Identities = 93/164 (56%), Positives = 108/164 (65%)
 Frame = +1

Query: 1   DTGSNKLYISNLDYGVSNEDIKELFSEVGEIQRYSVNYDRSGRSKGTAEVVFVRRSDAAA 180
           +TG+ KLYISNLDYGVSN+DIKELF EVG+++R++V+YDRSGRSKGTAEVVF RR+DA A
Sbjct: 83  ETGT-KLYISNLDYGVSNDDIKELFLEVGDVKRHTVHYDRSGRSKGTAEVVFSRRADAVA 141

Query: 181 AVKRYNNVQLDGKPMKIEIVGASIAPPVFPAVNTAIFANPVGFPQXXXXXXXXXXXXXXX 360
           AVKRYNNVQLDGKPMK+EIVG +IA    P      F NP G P+               
Sbjct: 142 AVKRYNNVQLDGKPMKVEIVGTNIATHAAPPAVNGTFGNPTGVPR--SGQGRSGSLGRPR 199

Query: 361 XXXXXXXXXXXXXXXXXXXXXEKVSATDLDADLDKYHTEAMQIN 492
                                EKVSA DLDADL+KYH EAMQ+N
Sbjct: 200 GGSRGRGSIQRGRGRGRGGRDEKVSAEDLDADLEKYHAEAMQLN 243


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score =  168 bits (426), Expect = 4e-40
 Identities = 95/164 (57%), Positives = 108/164 (65%)
 Frame = +1

Query: 1   DTGSNKLYISNLDYGVSNEDIKELFSEVGEIQRYSVNYDRSGRSKGTAEVVFVRRSDAAA 180
           +TG+ KLYISNL+YGVSNEDIKELFSEVG+++RYS++YDRSGRSKGTAEVVF RR+DA A
Sbjct: 88  ETGT-KLYISNLEYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALA 146

Query: 181 AVKRYNNVQLDGKPMKIEIVGASIAPPVFPAVNTAIFANPVGFPQXXXXXXXXXXXXXXX 360
           AVKRYNNVQLDGKPMKIEIVG +IA P         F N  G P+               
Sbjct: 147 AVKRYNNVQLDGKPMKIEIVGTNIATPAATPAANGNFGNSNGAPR---GGQGRGGTMRRP 203

Query: 361 XXXXXXXXXXXXXXXXXXXXXEKVSATDLDADLDKYHTEAMQIN 492
                                EKVSA DLDADL+KYH+EAMQ N
Sbjct: 204 RGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 247


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