BLASTX nr result

ID: Papaver22_contig00006682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006682
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-li...    53   6e-13
ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-li...    50   8e-13
gb|AFK41173.1| unknown [Lotus japonicus]                               52   2e-12
ref|XP_002310120.1| predicted protein [Populus trichocarpa] gi|2...    51   8e-12
ref|XP_002865016.1| exonuclease [Arabidopsis lyrata subsp. lyrat...    47   3e-10

>ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-like [Cucumis sativus]
           gi|449517369|ref|XP_004165718.1| PREDICTED: small RNA
           degrading nuclease 3-like [Cucumis sativus]
          Length = 524

 Score = 52.8 bits (125), Expect(2) = 6e-13
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = -1

Query: 432 HNCLADARAAMKLVLAKLEKGFDEIISLDAKEVTGDDLLKLFVHRIPIRVTAD 274
           HNCL DA+AAMKLVLAKLE   D+ I++  ++     + KL +HRIPI V ++
Sbjct: 283 HNCLDDAQAAMKLVLAKLESKADDGIAIVDEDTPQVGMEKLLLHRIPINVPSE 335



 Score = 45.8 bits (107), Expect(2) = 6e-13
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = -2

Query: 185 DSTVVLEPFYKPQAKQYYAS-AIFKDQQEVLATFESIEGEEGKDSHGLPQKFVTFQ 21
           D T+ L+P  K Q    Y++ AIF++ +E L  FE +EG   +DS G PQK + FQ
Sbjct: 344 DFTIELKPPKKGQGGDIYSALAIFQNPKEALQAFEEVEGNAYEDSSGRPQKLIRFQ 399


>ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-like [Glycine max]
          Length = 509

 Score = 50.4 bits (119), Expect(2) = 8e-13
 Identities = 24/61 (39%), Positives = 36/61 (59%)
 Frame = -2

Query: 191 PEDSTVVLEPFYKPQAKQYYASAIFKDQQEVLATFESIEGEEGKDSHGLPQKFVTFQLKN 12
           P +  + L+P  K Q   Y A AIF+   E    +E+++G + KD++G PQK VTF+L  
Sbjct: 341 PGNFKIELKPSRKGQGANYSAFAIFRSPPEADGAYENVQGSQLKDTYGHPQKLVTFRLST 400

Query: 11  G 9
           G
Sbjct: 401 G 401



 Score = 47.8 bits (112), Expect(2) = 8e-13
 Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = -1

Query: 432 HNCLADARAAMKLVLAKLEKGFDE--IISLDAKEVTGDDLLKLFVHRIPIRVTAD 274
           HNCL DA+AAM LVLAK++ G D+   I+L  + V   +L KL +H+IP  V  +
Sbjct: 280 HNCLDDAKAAMDLVLAKIKHGVDKEFPIALVQEHVPESELAKLLLHKIPNTVNIE 334


>gb|AFK41173.1| unknown [Lotus japonicus]
          Length = 525

 Score = 52.4 bits (124), Expect(2) = 2e-12
 Identities = 26/61 (42%), Positives = 36/61 (59%)
 Frame = -2

Query: 191 PEDSTVVLEPFYKPQAKQYYASAIFKDQQEVLATFESIEGEEGKDSHGLPQKFVTFQLKN 12
           P D T  ++P  K Q  +Y A A FK+QQE    +E+++G + KDS G PQK V F+   
Sbjct: 344 PGDFTTEVKPSRKGQRAKYSALATFKNQQEAYEAYENVQGSQTKDSFGRPQKEVMFRPST 403

Query: 11  G 9
           G
Sbjct: 404 G 404



 Score = 44.7 bits (104), Expect(2) = 2e-12
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
 Frame = -1

Query: 432 HNCLADARAAMKLVLAKLEKGFDE--IISLDAKEVTGDDLLKLFVHRIPIRVTAD 274
           HNCL DA AAMKLVLA+++ G D+    +L  + V+  D+ KL +H IP  V  +
Sbjct: 283 HNCLDDACAAMKLVLARIKHGVDKEFPFTLVQEHVSESDMTKLPLHGIPTSVNIE 337


>ref|XP_002310120.1| predicted protein [Populus trichocarpa] gi|222853023|gb|EEE90570.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 51.2 bits (121), Expect(2) = 8e-12
 Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 7/61 (11%)
 Frame = -1

Query: 432 HNCLADARAAMKLVLAKLEKGFDEIISL---DAKEVTGD----DLLKLFVHRIPIRVTAD 274
           HNCL DA AAMKLVLAK+E+G D  I L   D K+ + +    ++ KL +H+IP+ V  +
Sbjct: 231 HNCLDDACAAMKLVLAKIERGVDNYIPLIQPDVKDASYNVPEIEMAKLLLHKIPVTVPRE 290

Query: 273 E 271
           +
Sbjct: 291 K 291



 Score = 43.5 bits (101), Expect(2) = 8e-12
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = -2

Query: 194 FPEDSTVVLEPFYKPQAKQYYASAIFKDQQEVLATFESIEGEEGKDSHGLPQKFVTFQLK 15
           FP + T+ ++     Q   Y   AIFK+ +E    FE++ G   KD+ G PQK V  QL 
Sbjct: 296 FPANYTIEIKTHKVIQGVGYSVLAIFKNPEEACQAFENLIGSLEKDTSGRPQKLVALQLD 355

Query: 14  NG 9
            G
Sbjct: 356 TG 357


>ref|XP_002865016.1| exonuclease [Arabidopsis lyrata subsp. lyrata]
           gi|297310851|gb|EFH41275.1| exonuclease [Arabidopsis
           lyrata subsp. lyrata]
          Length = 776

 Score = 47.4 bits (111), Expect(2) = 3e-10
 Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
 Frame = -2

Query: 185 DSTVVLEPFYKPQAKQYYASAI--FKDQQEVLATFESIEGEEGKDSHGLPQKFVTFQLKN 12
           D T+V++P   PQ +  Y++A+  F   +E    FE++EG+  KD  GLPQK VT +L +
Sbjct: 354 DFTLVVKP---PQKEGGYSTAVLDFNSPEEANEAFENVEGDVAKDKSGLPQKMVTLKLSS 410

Query: 11  G 9
           G
Sbjct: 411 G 411



 Score = 42.0 bits (97), Expect(2) = 3e-10
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
 Frame = -1

Query: 432 HNCLADARAAMKLVLAKLEKGFDEIISLDAKEVTGD----------DLLKLFVHRIPIRV 283
           HNC+ DA A+MKLVLA +EKG D  I    + +  +             +LF+H+IP  V
Sbjct: 283 HNCVHDAAASMKLVLAVVEKGVDTTIQKSEEMLVAEKKRQEERQEAGKTQLFLHKIPHYV 342

Query: 282 TADE 271
            ++E
Sbjct: 343 PSEE 346


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