BLASTX nr result

ID: Papaver22_contig00006557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006557
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893460.1| hypothetical protein ARALYDRAFT_890252 [Arab...   108   5e-22
gb|ABL97965.1| putative nuclear transport factor 2 [Brassica rapa]    107   1e-21
ref|NP_174051.1| nuclear transport factor 2A [Arabidopsis thalia...   107   1e-21
ref|NP_174118.1| nuclear transport factor 2B [Arabidopsis thalia...   106   2e-21
ref|NP_001077612.1| nuclear transport factor 2B [Arabidopsis tha...   106   2e-21

>ref|XP_002893460.1| hypothetical protein ARALYDRAFT_890252 [Arabidopsis lyrata subsp.
           lyrata] gi|297339302|gb|EFH69719.1| hypothetical protein
           ARALYDRAFT_890252 [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  108 bits (270), Expect = 5e-22
 Identities = 60/106 (56%), Positives = 64/106 (60%)
 Frame = +3

Query: 90  MDPEAVSKAFVEHYYSTFDTNRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 269
           MDP+AV+KAFVEHYYSTFD NR G                                   S
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEG---------------------------S 33

Query: 270 MLSFEGEKIQGGTAIVNKLTSLPFQQCKHNITTVDFQPSGPAGGML 407
           ML+FEG+KIQG   IV KLTSLPFQQCKHNITTVD QPSGPAGGML
Sbjct: 34  MLTFEGQKIQGSQNIVAKLTSLPFQQCKHNITTVDCQPSGPAGGML 79


>gb|ABL97965.1| putative nuclear transport factor 2 [Brassica rapa]
          Length = 123

 Score =  107 bits (267), Expect = 1e-21
 Identities = 59/106 (55%), Positives = 65/106 (61%)
 Frame = +3

Query: 90  MDPEAVSKAFVEHYYSTFDTNRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 269
           MDP+AV+KAFVEHYYSTFDTNR G                                   S
Sbjct: 1   MDPDAVAKAFVEHYYSTFDTNRAGLAGFYQEA---------------------------S 33

Query: 270 MLSFEGEKIQGGTAIVNKLTSLPFQQCKHNITTVDFQPSGPAGGML 407
           ML+FEG+KIQG  +IV KLTSLPFQQCKHNI+TVD QPSGPA GML
Sbjct: 34  MLTFEGQKIQGVQSIVAKLTSLPFQQCKHNISTVDCQPSGPASGML 79


>ref|NP_174051.1| nuclear transport factor 2A [Arabidopsis thaliana]
           gi|9802547|gb|AAF99749.1|AC004557_28 F17L21.10
           [Arabidopsis thaliana] gi|14596203|gb|AAK68829.1|
           similar to nuclear transport factor 2 [Arabidopsis
           thaliana] gi|18377444|gb|AAL66888.1| similar to nuclear
           transport factor 2 [Arabidopsis thaliana]
           gi|332192684|gb|AEE30805.1| nuclear transport factor 2A
           [Arabidopsis thaliana]
          Length = 122

 Score =  107 bits (266), Expect = 1e-21
 Identities = 59/106 (55%), Positives = 63/106 (59%)
 Frame = +3

Query: 90  MDPEAVSKAFVEHYYSTFDTNRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 269
           MDP+AV+KAFVEHYYSTFD NR G                                   S
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEG---------------------------S 33

Query: 270 MLSFEGEKIQGGTAIVNKLTSLPFQQCKHNITTVDFQPSGPAGGML 407
           ML+FEG+KIQG   IV KLT LPFQQCKHNITTVD QPSGPAGGML
Sbjct: 34  MLTFEGQKIQGSQNIVAKLTGLPFQQCKHNITTVDCQPSGPAGGML 79


>ref|NP_174118.1| nuclear transport factor 2B [Arabidopsis thaliana]
           gi|15214148|sp|Q9C7F5.1|NTF2_ARATH RecName: Full=Nuclear
           transport factor 2; Short=NTF-2
           gi|12323001|gb|AAG51491.1|AC069471_22 nuclear transport
           factor 2, putative [Arabidopsis thaliana]
           gi|98961065|gb|ABF59016.1| At1g27970 [Arabidopsis
           thaliana] gi|332192775|gb|AEE30896.1| nuclear transport
           factor 2B [Arabidopsis thaliana]
          Length = 126

 Score =  106 bits (264), Expect = 2e-21
 Identities = 59/107 (55%), Positives = 66/107 (61%)
 Frame = +3

Query: 87  EMDPEAVSKAFVEHYYSTFDTNRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 266
           +MDP+AVSKAFVEHYYSTFDTNR G                                   
Sbjct: 3   QMDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEA--------------------------- 35

Query: 267 SMLSFEGEKIQGGTAIVNKLTSLPFQQCKHNITTVDFQPSGPAGGML 407
           SML+FEG+KIQG  +IV KLTSLPFQQCKH+I+TVD QPSGPA GML
Sbjct: 36  SMLTFEGQKIQGVQSIVAKLTSLPFQQCKHHISTVDCQPSGPASGML 82


>ref|NP_001077612.1| nuclear transport factor 2B [Arabidopsis thaliana]
           gi|332192776|gb|AEE30897.1| nuclear transport factor 2B
           [Arabidopsis thaliana]
          Length = 134

 Score =  106 bits (264), Expect = 2e-21
 Identities = 59/107 (55%), Positives = 66/107 (61%)
 Frame = +3

Query: 87  EMDPEAVSKAFVEHYYSTFDTNRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 266
           +MDP+AVSKAFVEHYYSTFDTNR G                                   
Sbjct: 3   QMDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEA--------------------------- 35

Query: 267 SMLSFEGEKIQGGTAIVNKLTSLPFQQCKHNITTVDFQPSGPAGGML 407
           SML+FEG+KIQG  +IV KLTSLPFQQCKH+I+TVD QPSGPA GML
Sbjct: 36  SMLTFEGQKIQGVQSIVAKLTSLPFQQCKHHISTVDCQPSGPASGML 82


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