BLASTX nr result

ID: Papaver22_contig00006530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006530
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271807.1| PREDICTED: stromal cell-derived factor 2-lik...   134   8e-30
ref|NP_565585.1| stromal cell-derived factor 2-like protein [Ara...   133   2e-29
ref|XP_002878825.1| MIR domain-containing protein [Arabidopsis l...   133   2e-29
pdb|3MAL|A Chain A, Crystal Structure Of The Sdf2-Like Protein F...   133   2e-29
gb|ACU24458.1| unknown [Glycine max]                                  133   2e-29

>ref|XP_002271807.1| PREDICTED: stromal cell-derived factor 2-like protein [Vitis
           vinifera] gi|297745088|emb|CBI38927.3| unnamed protein
           product [Vitis vinifera]
          Length = 214

 Score =  134 bits (338), Expect = 8e-30
 Identities = 61/68 (89%), Positives = 64/68 (94%)
 Frame = +1

Query: 1   EIEGKGKTWRQDQRVRLQHVDTGGYLHSHDKKYTRIAGGQQEVCGVREKRPDNVWLAAEG 180
           EIEG GKTW+QDQRVRL HVDTGGYLHSHDKKYTRIAGGQQEVCGVR+KR DNVWLA EG
Sbjct: 147 EIEGSGKTWKQDQRVRLLHVDTGGYLHSHDKKYTRIAGGQQEVCGVRDKRADNVWLAVEG 206

Query: 181 VYLPVNEA 204
           VYLPVNE+
Sbjct: 207 VYLPVNES 214


>ref|NP_565585.1| stromal cell-derived factor 2-like protein [Arabidopsis thaliana]
           gi|24212393|sp|Q93ZE8.1|SDF2_ARATH RecName: Full=Stromal
           cell-derived factor 2-like protein; Short=SDF2-like
           protein; Flags: Precursor gi|16209645|gb|AAL14383.1|
           At2g25110/F13D4.70 [Arabidopsis thaliana]
           gi|23505803|gb|AAN28761.1| At2g25110/F13D4.70
           [Arabidopsis thaliana] gi|330252565|gb|AEC07659.1|
           stromal cell-derived factor 2-like protein [Arabidopsis
           thaliana]
          Length = 218

 Score =  133 bits (335), Expect = 2e-29
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = +1

Query: 4   IEGKGKTWRQDQRVRLQHVDTGGYLHSHDKKYTRIAGGQQEVCGVREKRPDNVWLAAEGV 183
           IEG GKTW+QDQRVRLQH+DT GYLHSHDKKY RIAGGQQEVCG+REK+ DN+WLAAEGV
Sbjct: 150 IEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQEVCGIREKKADNIWLAAEGV 209

Query: 184 YLPVNEASK 210
           YLP+NE+SK
Sbjct: 210 YLPLNESSK 218


>ref|XP_002878825.1| MIR domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324664|gb|EFH55084.1| MIR domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 218

 Score =  133 bits (335), Expect = 2e-29
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = +1

Query: 4   IEGKGKTWRQDQRVRLQHVDTGGYLHSHDKKYTRIAGGQQEVCGVREKRPDNVWLAAEGV 183
           IEG GKTW+QDQRVRLQH+DT GYLHSHDKKY RIAGGQQEVCG+REK+ DN+WLAAEGV
Sbjct: 150 IEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQEVCGIREKKADNIWLAAEGV 209

Query: 184 YLPVNEASK 210
           YLP+NE+SK
Sbjct: 210 YLPLNESSK 218


>pdb|3MAL|A Chain A, Crystal Structure Of The Sdf2-Like Protein From
           Arabidopsis gi|293652062|pdb|3MAL|B Chain B, Crystal
           Structure Of The Sdf2-Like Protein From Arabidopsis
          Length = 199

 Score =  133 bits (335), Expect = 2e-29
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = +1

Query: 4   IEGKGKTWRQDQRVRLQHVDTGGYLHSHDKKYTRIAGGQQEVCGVREKRPDNVWLAAEGV 183
           IEG GKTW+QDQRVRLQH+DT GYLHSHDKKY RIAGGQQEVCG+REK+ DN+WLAAEGV
Sbjct: 131 IEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQEVCGIREKKADNIWLAAEGV 190

Query: 184 YLPVNEASK 210
           YLP+NE+SK
Sbjct: 191 YLPLNESSK 199


>gb|ACU24458.1| unknown [Glycine max]
          Length = 222

 Score =  133 bits (335), Expect = 2e-29
 Identities = 59/67 (88%), Positives = 64/67 (95%)
 Frame = +1

Query: 4   IEGKGKTWRQDQRVRLQHVDTGGYLHSHDKKYTRIAGGQQEVCGVREKRPDNVWLAAEGV 183
           IEG GKTW+QDQR+RLQH+DTGGYLHSHDKKY+RIAGGQQEVCGVREKR DNVWLAAEGV
Sbjct: 155 IEGSGKTWKQDQRIRLQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGV 214

Query: 184 YLPVNEA 204
           YLPV E+
Sbjct: 215 YLPVTES 221


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