BLASTX nr result

ID: Papaver22_contig00006285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006285
         (1295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239810.1| uncharacterized protein LOC100789793 [Glycin...   638   0.0  
ref|XP_003554035.1| PREDICTED: U5 small nuclear ribonucleoprotei...   637   e-180
ref|XP_004135336.1| PREDICTED: U5 small nuclear ribonucleoprotei...   629   e-178
ref|XP_004172746.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...   626   e-177
ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotei...   623   e-176

>ref|NP_001239810.1| uncharacterized protein LOC100789793 [Glycine max]
            gi|255645285|gb|ACU23139.1| unknown [Glycine max]
          Length = 345

 Score =  638 bits (1646), Expect = 0.0
 Identities = 297/345 (86%), Positives = 320/345 (92%)
 Frame = -1

Query: 1253 MQAVSREGGNALALGGPRPMDWSTVPFNGTQATGPNGKQRTSSLESPIMLLAGHQSAVYT 1074
            MQ  S EG +AL++ GPRPM+WSTVP+N  QA GPNGKQRTSSLESPIMLL+GHQSA+YT
Sbjct: 1    MQVFSIEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 1073 MKFNPSGTVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLQWTTDGYQIISASPDK 894
            MKFNP+G+VIASGSHD+EIFLWNVHGDCKNFMVLKGHKNAVLDL WTTDG QI+SASPDK
Sbjct: 61   MKFNPAGSVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 893  TLRAWDVETGKQIKKMVEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFP 714
            T+RAWDVETGKQIKKMVEH S+VNSCCPSRRGPPLVVSGSDDGTAKLWD+RQRG+IQTFP
Sbjct: 121  TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 713  DKYQITAVGFSDAADKIFTGGIDNDVKVWDLRRNEVTMTLQGHSDTITGMQLSPDGSYLL 534
            DKYQITAVGFSDA+DKIFTGGIDNDVK+WDLR+ EVTMTLQGH D IT MQLSPDGSYLL
Sbjct: 181  DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITDMQLSPDGSYLL 240

Query: 533  TNAMDCSLRIWDLRPYAPQNRCVKIFTGHQHNFEKTLLKCSWSADGSKVSAGSADRMVYI 354
            TN MDC L IWD+RPYAPQNRCVK+  GHQHNFEK LLKC WS DGSKV+AGS+DRMVYI
Sbjct: 241  TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 353  WDTTSRRVLYMLPGHNGSVNECVFHPTEPIIGSCSSDKQIYLGEI 219
            WDTTSRR+LY LPGHNGSVNECVFHP EPIIGSCSSDKQIYLGEI
Sbjct: 301  WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345


>ref|XP_003554035.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            isoform 1 [Glycine max] gi|356571750|ref|XP_003554036.1|
            PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa
            protein-like isoform 2 [Glycine max]
            gi|356571752|ref|XP_003554037.1| PREDICTED: U5 small
            nuclear ribonucleoprotein 40 kDa protein-like isoform 3
            [Glycine max]
          Length = 345

 Score =  637 bits (1643), Expect = e-180
 Identities = 295/345 (85%), Positives = 319/345 (92%)
 Frame = -1

Query: 1253 MQAVSREGGNALALGGPRPMDWSTVPFNGTQATGPNGKQRTSSLESPIMLLAGHQSAVYT 1074
            MQ    EG +AL++ GPRPM+WSTVP+N  QA GPNGKQRTSSLESPIMLL+GHQSA+YT
Sbjct: 1    MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60

Query: 1073 MKFNPSGTVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLQWTTDGYQIISASPDK 894
            MKFNP+G+V+ASGSHD+EIFLWNVHGDCKNFMVLKGHKNAVLDL WTTDG QI+SASPDK
Sbjct: 61   MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120

Query: 893  TLRAWDVETGKQIKKMVEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFP 714
            T+RAWDVETGKQIKKMVEH S+VNSCCPSRRGPPLVVSGSDDGTAKLWD+RQRG+IQTFP
Sbjct: 121  TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180

Query: 713  DKYQITAVGFSDAADKIFTGGIDNDVKVWDLRRNEVTMTLQGHSDTITGMQLSPDGSYLL 534
            DKYQITAVGFSDA+DKIFTGGIDNDVK+WDLR+ EVTMTLQGH D IT MQLSPDGSYLL
Sbjct: 181  DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLL 240

Query: 533  TNAMDCSLRIWDLRPYAPQNRCVKIFTGHQHNFEKTLLKCSWSADGSKVSAGSADRMVYI 354
            TN MDC L IWD+RPYAPQNRCVK+  GHQHNFEK LLKC WS DGSKV+AGS+DRMVYI
Sbjct: 241  TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300

Query: 353  WDTTSRRVLYMLPGHNGSVNECVFHPTEPIIGSCSSDKQIYLGEI 219
            WDTTSRR+LY LPGHNGSVNECVFHP EPIIGSCSSDKQIYLGEI
Sbjct: 301  WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345


>ref|XP_004135336.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            [Cucumis sativus]
          Length = 344

 Score =  629 bits (1621), Expect = e-178
 Identities = 293/342 (85%), Positives = 312/342 (91%)
 Frame = -1

Query: 1244 VSREGGNALALGGPRPMDWSTVPFNGTQATGPNGKQRTSSLESPIMLLAGHQSAVYTMKF 1065
            V  EG NALA  GPRPM+WSTVP+N  Q  GPN KQRTSSLESPIMLL+GHQSA+YT+KF
Sbjct: 3    VPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTLKF 62

Query: 1064 NPSGTVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLQWTTDGYQIISASPDKTLR 885
            NP G V+ASGSHDKEIFLWNVHGDCKNFMVL+GHKNAVLDL WT DG QI+SASPDKTLR
Sbjct: 63   NPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLR 122

Query: 884  AWDVETGKQIKKMVEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFPDKY 705
            AWDVETGKQIKKM EHSSFVNSCCP+RRGPPL+VSGSDDGTAKLWD+RQRGAIQTFPDKY
Sbjct: 123  AWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKY 182

Query: 704  QITAVGFSDAADKIFTGGIDNDVKVWDLRRNEVTMTLQGHSDTITGMQLSPDGSYLLTNA 525
            QITAV FSDA+DKIFTGGIDNDVKVWDLR+ EV MTLQGH D ITGMQLSPDGSYLLTN 
Sbjct: 183  QITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNG 242

Query: 524  MDCSLRIWDLRPYAPQNRCVKIFTGHQHNFEKTLLKCSWSADGSKVSAGSADRMVYIWDT 345
            MDC L IWD+RPYAPQNRCVKIF GHQHNFEK LLKCSWSADGSKV+AGS+DRMVYIWDT
Sbjct: 243  MDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDT 302

Query: 344  TSRRVLYMLPGHNGSVNECVFHPTEPIIGSCSSDKQIYLGEI 219
            TSRR+LY LPGH GSVNECVFHP+EPI+ SC SDKQIYLGEI
Sbjct: 303  TSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 344


>ref|XP_004172746.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 40
            kDa protein-like [Cucumis sativus]
          Length = 344

 Score =  626 bits (1615), Expect = e-177
 Identities = 292/342 (85%), Positives = 311/342 (90%)
 Frame = -1

Query: 1244 VSREGGNALALGGPRPMDWSTVPFNGTQATGPNGKQRTSSLESPIMLLAGHQSAVYTMKF 1065
            V  EG NALA  GPRPM+WSTVP+N  Q  GPN KQRTSSLESPIMLL+GHQSA+YT+KF
Sbjct: 3    VPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTLKF 62

Query: 1064 NPSGTVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLQWTTDGYQIISASPDKTLR 885
            NP G V+ASGSHDKEIFLWNVHGDCKNFMVL+GHKNAVLDL WT DG QI+SASPDKTLR
Sbjct: 63   NPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLR 122

Query: 884  AWDVETGKQIKKMVEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFPDKY 705
            AWDVETGKQIKKM EHSSFVNSCCP+RRGPPL+VSGSDDGTAKLWD+RQRGAIQTFPDKY
Sbjct: 123  AWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKY 182

Query: 704  QITAVGFSDAADKIFTGGIDNDVKVWDLRRNEVTMTLQGHSDTITGMQLSPDGSYLLTNA 525
            QITAV FSDA+DKIFTGGIDNDVKVWDLR+ EV MTLQGH D ITGMQLSPDGSYLLTN 
Sbjct: 183  QITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNG 242

Query: 524  MDCSLRIWDLRPYAPQNRCVKIFTGHQHNFEKTLLKCSWSADGSKVSAGSADRMVYIWDT 345
            MDC L IWD+RPYAPQNRCVKIF GHQHNF K LLKCSWSADGSKV+AGS+DRMVYIWDT
Sbjct: 243  MDCKLCIWDMRPYAPQNRCVKIFEGHQHNFXKNLLKCSWSADGSKVTAGSSDRMVYIWDT 302

Query: 344  TSRRVLYMLPGHNGSVNECVFHPTEPIIGSCSSDKQIYLGEI 219
            TSRR+LY LPGH GSVNECVFHP+EPI+ SC SDKQIYLGEI
Sbjct: 303  TSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 344


>ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
            [Vitis vinifera]
          Length = 344

 Score =  623 bits (1606), Expect = e-176
 Identities = 296/337 (87%), Positives = 313/337 (92%), Gaps = 1/337 (0%)
 Frame = -1

Query: 1226 NALALGGPRP-MDWSTVPFNGTQATGPNGKQRTSSLESPIMLLAGHQSAVYTMKFNPSGT 1050
            NAL++ GPRP M+ S VP  G +A G NGKQRTSSLESPIMLLAGHQSA+YTMKFNP+GT
Sbjct: 8    NALSVVGPRPGMELSAVPCTGPRAPGANGKQRTSSLESPIMLLAGHQSAIYTMKFNPTGT 67

Query: 1049 VIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLQWTTDGYQIISASPDKTLRAWDVE 870
            VIASGSH++EIFLW VHGDCKNFMVLKGHKNA+LDLQWTTDG QIISASPDKTLRAWDVE
Sbjct: 68   VIASGSHEREIFLWYVHGDCKNFMVLKGHKNAILDLQWTTDGTQIISASPDKTLRAWDVE 127

Query: 869  TGKQIKKMVEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFPDKYQITAV 690
            TGKQIKKM EHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWD+RQRGAIQTFPDKYQITAV
Sbjct: 128  TGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAV 187

Query: 689  GFSDAADKIFTGGIDNDVKVWDLRRNEVTMTLQGHSDTITGMQLSPDGSYLLTNAMDCSL 510
             FSDA+DKIFTGGIDNDVKVWDLRRNEVTMTLQGH D ITGMQLSPDGSYLLTN MDC L
Sbjct: 188  SFSDASDKIFTGGIDNDVKVWDLRRNEVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCKL 247

Query: 509  RIWDLRPYAPQNRCVKIFTGHQHNFEKTLLKCSWSADGSKVSAGSADRMVYIWDTTSRRV 330
             IWD+RPYAPQNRCVKI  GHQHNFEK LLKCSWS DGSKV+AGS+DRMVYIWDTTSRR+
Sbjct: 248  CIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRI 307

Query: 329  LYMLPGHNGSVNECVFHPTEPIIGSCSSDKQIYLGEI 219
            LY LPGH GSVNECVFHP+EPI+GSCSSDKQIYLGEI
Sbjct: 308  LYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344


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