BLASTX nr result

ID: Papaver22_contig00006260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006260
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521095.1| 60S ribosomal protein L13a, putative [Ricinu...    52   8e-06

>ref|XP_002521095.1| 60S ribosomal protein L13a, putative [Ricinus communis]
           gi|223539664|gb|EEF41246.1| 60S ribosomal protein L13a,
           putative [Ricinus communis]
          Length = 206

 Score = 52.0 bits (123), Expect(2) = 8e-06
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +3

Query: 30  HTRPSEAAAVS*FEAYEGIPPPYDKIKRMVIPDALKCM 143
           H      AA++  + YEGIPPPYDKIKRMVIPDALK +
Sbjct: 95  HKTKRGEAALARLKVYEGIPPPYDKIKRMVIPDALKVL 132



 Score = 24.3 bits (51), Expect(2) = 8e-06
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 8   KTILFVIPHKTKRG 49
           +T+  +IPHKTKRG
Sbjct: 87  RTVRGMIPHKTKRG 100


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