BLASTX nr result

ID: Papaver22_contig00006038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006038
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522673.1| PREDICTED: ribonuclease H2 subunit B-like [G...    67   3e-09
ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...    65   9e-09
ref|NP_001173983.1| Os04g0476400 [Oryza sativa Japonica Group] g...    65   1e-08
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm...    65   1e-08
emb|CAH67317.1| OSIGBa0106G07.13 [Oryza sativa Indica Group] gi|...    65   1e-08

>ref|XP_003522673.1| PREDICTED: ribonuclease H2 subunit B-like [Glycine max]
          Length = 276

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 8/102 (7%)
 Frame = +2

Query: 5   QSEKDTLVEAVALLGEYLNEER-VKLLCNHLKLDLRQA-------PEPSSHEFVPHFVET 160
           QSEKDTL++AV++LGEYL EE  ++LLCNHLKL++ +         E +++  + + ++ 
Sbjct: 177 QSEKDTLIDAVSILGEYLKEEPWLQLLCNHLKLNILEVTGKAQANAEGNNNSRLCNELQE 236

Query: 161 APADQAXXXXXXXXXXXXXQAKKMKAETNSQNIKDMFRRVTR 286
              D+              QAKK+K ET S NIKDMF R +R
Sbjct: 237 QSNDK-----KGTTAKKGRQAKKVKLETESHNIKDMFSRASR 273


>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
           gi|296081827|emb|CBI20832.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
 Frame = +2

Query: 2   AQSEKDTLVEAVALLGEYLNEER-VKLLCNHLKLDLRQAPEPSSHEFVPHFVETAPAD-- 172
           A+ +KDTL +A+++LGEYL +E  +KLLC+HLKL+L  A   +S   V  F  TAP +  
Sbjct: 176 ARDKKDTLTDAISILGEYLEDEPWLKLLCDHLKLNLLDATMKAS---VIEFHPTAPDNSL 232

Query: 173 ------QAXXXXXXXXXXXXXQAKKMKAETNSQNIKDMFRRVTR 286
                 Q              Q KK K E +S+NIKDMF R +R
Sbjct: 233 GSSNQLQGKSGNERKTTRPGKQPKKAKVEKDSRNIKDMFSRASR 276


>ref|NP_001173983.1| Os04g0476400 [Oryza sativa Japonica Group]
           gi|255675553|dbj|BAH92711.1| Os04g0476400, partial
           [Oryza sativa Japonica Group]
          Length = 130

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
 Frame = +2

Query: 2   AQSEKDTLVEAVALLGEYLNEER-VKLLCNHLKLDLRQAPEPSSHEFVPHFVETAPAD-- 172
           AQ EK+ L +AV ++ EYLN+E  + LLC  L+LD+++  E +         E +P    
Sbjct: 28  AQGEKELLKDAVQIIREYLNDEPWLTLLCKKLQLDIKEIIEANKTSEASFCAENSPVPFH 87

Query: 173 --QAXXXXXXXXXXXXXQAKKMKAETNSQNIKDMFRRVTRSG 292
             +               AKK KAE  S+NIKDMFRRVTR G
Sbjct: 88  PAEEKLGSSSTRSSKGRPAKKQKAEVESKNIKDMFRRVTRKG 129


>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
           gi|223543075|gb|EEF44610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 299

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
 Frame = +2

Query: 2   AQSEKDTLVEAVALLGEYLNEER-VKLLCNHLKLDLRQAPEPSSHEFVPHFVETAPAD-- 172
           AQ EK+TL +A+ +LGEYL +E  +KLLCNHLKL+L +A      +      E  PA   
Sbjct: 199 AQDEKNTLADAIMILGEYLKDEPWLKLLCNHLKLNLLEATR-KVPDAETSLTENNPASSN 257

Query: 173 --QAXXXXXXXXXXXXXQAKKMKAETNSQNIKDMFRRVTR 286
             Q              QAKK K ET S NI++MF R +R
Sbjct: 258 LMQEKGKNDGKTKRTGKQAKKAKVETESLNIREMFSRASR 297


>emb|CAH67317.1| OSIGBa0106G07.13 [Oryza sativa Indica Group]
           gi|125548707|gb|EAY94529.1| hypothetical protein
           OsI_16306 [Oryza sativa Indica Group]
          Length = 279

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
 Frame = +2

Query: 2   AQSEKDTLVEAVALLGEYLNEER-VKLLCNHLKLDLRQAPEPSSHEFVPHFVETAPAD-- 172
           AQ EK+ L +AV ++ EYLN+E  + LLC  L+LD+++  E +         E +P    
Sbjct: 177 AQGEKELLKDAVQIIREYLNDEPWLTLLCKKLQLDIKEIIEANKTSEASFCAENSPVPFH 236

Query: 173 --QAXXXXXXXXXXXXXQAKKMKAETNSQNIKDMFRRVTRSG 292
             +               AKK KAE  S+NIKDMFRRVTR G
Sbjct: 237 PAEEKLGSSSTRSSKGRPAKKQKAEVESKNIKDMFRRVTRKG 278


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