BLASTX nr result

ID: Papaver22_contig00006026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006026
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]   275   7e-72
ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...   273   2e-71
ref|NP_001078412.2| ribonuclease H2 subunit B [Arabidopsis thali...   256   3e-66
ref|XP_002869938.1| hypothetical protein ARALYDRAFT_329539 [Arab...   254   1e-65
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C...   251   8e-65

>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score =  275 bits (702), Expect = 7e-72
 Identities = 127/185 (68%), Positives = 153/185 (82%)
 Frame = +2

Query: 101 MSWWEGNEETRLLIAPESGSSTGTGNVDGVMLSLKHPKSGNKACYFLNNGSLQELNWFKQ 280
           M+W EG EETRLLIAP+  +    GN  G  LSL+HPKSG   CY   NG+LQELNWFKQ
Sbjct: 1   MAWSEGVEETRLLIAPDVNA---IGNGLGQFLSLRHPKSGKATCYLFKNGTLQELNWFKQ 57

Query: 281 SYGSWFLGDYVCQDGGLYIATAIDPVFLFLPIFDEARLKKNGDQGMFRSVDEILFVDNYP 460
           SYGSWFLGDYVC+DG LY AT +DPVF+ LPIF+EAR+KK  D G FR +DEI+FV++YP
Sbjct: 58  SYGSWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYP 117

Query: 461 GYRHLLSIAEDCMQIVCEMKEVGSSKFFRLNDSKVLAWMCHKVYQLKITLPTLDKNYGAQ 640
           GY+HL+ IAE+CMQ+VCE+KE+GSSKFFRL+DSKVLAW+C+KV+QLK  LPTLDKNY A+
Sbjct: 118 GYQHLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAAR 177

Query: 641 SEKDT 655
            +KDT
Sbjct: 178 DKKDT 182


>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
           gi|296081827|emb|CBI20832.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  273 bits (698), Expect = 2e-71
 Identities = 126/185 (68%), Positives = 152/185 (82%)
 Frame = +2

Query: 101 MSWWEGNEETRLLIAPESGSSTGTGNVDGVMLSLKHPKSGNKACYFLNNGSLQELNWFKQ 280
           M+W EG EETRLLIAP+  +    GN  G  LS +HPKSG   CY   NG+LQELNWFKQ
Sbjct: 1   MAWSEGVEETRLLIAPDVNA---IGNGLGQFLSFRHPKSGKATCYLFKNGTLQELNWFKQ 57

Query: 281 SYGSWFLGDYVCQDGGLYIATAIDPVFLFLPIFDEARLKKNGDQGMFRSVDEILFVDNYP 460
           SYGSWFLGDYVC+DG LY AT +DPVF+ LPIF+EAR+KK  D G FR +DEI+FV++YP
Sbjct: 58  SYGSWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYP 117

Query: 461 GYRHLLSIAEDCMQIVCEMKEVGSSKFFRLNDSKVLAWMCHKVYQLKITLPTLDKNYGAQ 640
           GY+HL+ IAE+CMQ+VCE+KE+GSSKFFRL+DSKVLAW+C+KV+QLK  LPTLDKNY A+
Sbjct: 118 GYQHLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAAR 177

Query: 641 SEKDT 655
            +KDT
Sbjct: 178 DKKDT 182


>ref|NP_001078412.2| ribonuclease H2 subunit B [Arabidopsis thaliana]
           gi|332658907|gb|AEE84307.1| ribonuclease H2 subunit B
           [Arabidopsis thaliana]
          Length = 277

 Score =  256 bits (654), Expect = 3e-66
 Identities = 118/183 (64%), Positives = 145/183 (79%)
 Frame = +2

Query: 107 WWEGNEETRLLIAPESGSSTGTGNVDGVMLSLKHPKSGNKACYFLNNGSLQELNWFKQSY 286
           WWEG E+TR+LIAP+SG     GN  G +L+L+HPKS N  C+  NN  LQEL WFKQSY
Sbjct: 6   WWEGAEKTRVLIAPDSGCG---GNKPGELLTLRHPKSENGTCFLFNNEMLQELQWFKQSY 62

Query: 287 GSWFLGDYVCQDGGLYIATAIDPVFLFLPIFDEARLKKNGDQGMFRSVDEILFVDNYPGY 466
           GSWFLGDY+ +DG LY+AT +DPVF+ LPIFDEAR+KK  + G FR +DEILFV+ YPGY
Sbjct: 63  GSWFLGDYISEDGSLYMATPVDPVFILLPIFDEARMKKGENSGKFRQLDEILFVEGYPGY 122

Query: 467 RHLLSIAEDCMQIVCEMKEVGSSKFFRLNDSKVLAWMCHKVYQLKITLPTLDKNYGAQSE 646
           +HLLS+AE CM+IVC+ +EVGS KF+RL++SKVLAW+  K+Y LK +LP LDKNY AQ E
Sbjct: 123 QHLLSLAEKCMEIVCQTQEVGSMKFYRLDNSKVLAWLSCKIYCLKNSLPELDKNYAAQDE 182

Query: 647 KDT 655
           K T
Sbjct: 183 KQT 185


>ref|XP_002869938.1| hypothetical protein ARALYDRAFT_329539 [Arabidopsis lyrata subsp.
           lyrata] gi|297315774|gb|EFH46197.1| hypothetical protein
           ARALYDRAFT_329539 [Arabidopsis lyrata subsp. lyrata]
          Length = 277

 Score =  254 bits (649), Expect = 1e-65
 Identities = 118/183 (64%), Positives = 144/183 (78%)
 Frame = +2

Query: 107 WWEGNEETRLLIAPESGSSTGTGNVDGVMLSLKHPKSGNKACYFLNNGSLQELNWFKQSY 286
           WWEG E+TR+LIAP+SG     GN  G +L+L+HPKS +  C+  NN  +QEL WFKQSY
Sbjct: 6   WWEGTEKTRVLIAPDSGCG---GNKPGELLTLRHPKSESGTCFLFNNEMIQELQWFKQSY 62

Query: 287 GSWFLGDYVCQDGGLYIATAIDPVFLFLPIFDEARLKKNGDQGMFRSVDEILFVDNYPGY 466
           GSWFLGDY+ +DG LY+AT +DPVF+ LPIFDEAR+KK  D G FR +DEILFV+ YPGY
Sbjct: 63  GSWFLGDYISEDGSLYMATPVDPVFILLPIFDEARMKKGEDLGKFRQLDEILFVEGYPGY 122

Query: 467 RHLLSIAEDCMQIVCEMKEVGSSKFFRLNDSKVLAWMCHKVYQLKITLPTLDKNYGAQSE 646
           +HLLS+AE CM IVC+ +EVGS KF+RL++SKVLAW+  KVY LK +LP LDKNY AQ E
Sbjct: 123 QHLLSLAEKCMGIVCQTQEVGSMKFYRLDNSKVLAWLSCKVYCLKKSLPELDKNYAAQDE 182

Query: 647 KDT 655
           K T
Sbjct: 183 KQT 185


>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
           gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
           H2 subunit B-like [Cucumis sativus]
          Length = 281

 Score =  251 bits (641), Expect = 8e-65
 Identities = 119/185 (64%), Positives = 145/185 (78%)
 Frame = +2

Query: 101 MSWWEGNEETRLLIAPESGSSTGTGNVDGVMLSLKHPKSGNKACYFLNNGSLQELNWFKQ 280
           M+W EG EETR+LIAP+ G      NV G  LSL+HPKSGN  C+   N  L+E++WFKQ
Sbjct: 1   MAWCEGVEETRILIAPDHGVKE---NVTGCFLSLRHPKSGNPTCFLYVNEMLEEIHWFKQ 57

Query: 281 SYGSWFLGDYVCQDGGLYIATAIDPVFLFLPIFDEARLKKNGDQGMFRSVDEILFVDNYP 460
           SY SWFLGDYV +DG LY AT +DPVF+FLPIF+EAR+KK  D G FR +D+I+F++ YP
Sbjct: 58  SYSSWFLGDYVAEDGRLYSATPVDPVFIFLPIFEEARMKKGDDLGKFRQLDDIMFINGYP 117

Query: 461 GYRHLLSIAEDCMQIVCEMKEVGSSKFFRLNDSKVLAWMCHKVYQLKITLPTLDKNYGAQ 640
           GY HLL +AE  MQ+VCE+KEVGSS+FFRL+DSKVLAW+ HKV QLK TL TLDKNY A+
Sbjct: 118 GYLHLLPLAEKFMQVVCEVKEVGSSRFFRLDDSKVLAWLYHKVCQLKRTLCTLDKNYAAR 177

Query: 641 SEKDT 655
            EK+T
Sbjct: 178 EEKET 182


Top