BLASTX nr result

ID: Papaver22_contig00006007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006007
         (1604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303905.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-13
ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    81   9e-13
ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    79   4e-12
ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    78   6e-12
ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medic...    78   6e-12

>ref|XP_002303905.1| predicted protein [Populus trichocarpa] gi|222841337|gb|EEE78884.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
 Frame = -2

Query: 487 FHPCHV*AGFENLIPGLPNSVSGRPSQEDAQEFLCFVMLKCMMKYLSVFGQVSNTGG--- 317
           F P    A  +N  P +PNS+SGRP QEDAQEFL F+M +   + L + GQ S T G   
Sbjct: 18  FRPAMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMHQMHDELLKLEGQSSGTNGFKT 77

Query: 316 EVSLQLLFHNMETAGPKNKFVVTKAQSSVPSKISEIFG 203
            V         ET GPKNK  VT+ QS +PS++S+IFG
Sbjct: 78  SVVSSTEEDEWETVGPKNKSAVTRTQSFIPSELSDIFG 115


>ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 530

 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
 Frame = -2

Query: 487 FHPCHV*AGFENLIPGLPNSVSGRPSQEDAQEFLCFVMLKCMMKYLSVFGQVSNTGGEVS 308
           F P       +N  P +PNS+SGRP QEDAQEFL FVM +   + L + GQ S+  G  S
Sbjct: 253 FRPVMFEGVLKNFTPDVPNSISGRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLNGSKS 312

Query: 307 ---LQLLFHNMETAGPKNKFVVTKAQSSVPSKISEIFGDS*EAL*RLKVARTLLRLSP 143
                +     ET GPKNK  VT+ QS +PS++S IFG    +L R K  R    + P
Sbjct: 313 SLVSSVEDDEWETVGPKNKSAVTRTQSFLPSELSGIFGGQLRSLVRAKGNRASATVQP 370


>ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis
           vinifera] gi|296081305|emb|CBI17749.3| unnamed protein
           product [Vitis vinifera]
          Length = 553

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
 Frame = -2

Query: 487 FHPCHV*AGFENLIPGLPNSVSGRPSQEDAQEFLCFVMLKCMMKYLSVFGQVSN-TGGEV 311
           F P       +N  P +PN +SGRP QEDAQEFL FVM +   + L + G  SN  GG+ 
Sbjct: 275 FSPAMFEGVLKNFTPDVPNKISGRPRQEDAQEFLSFVMDQMHDELLKLEGFFSNLNGGKS 334

Query: 310 SLQLLFHN--METAGPKNKFVVTKAQSSVPSKISEIFGDS*EAL*RLKVARTLLRLSPAS 137
           SL     +   ET GPKNK  VT+ QS VPS++S+IFG    ++ + +  +    + P  
Sbjct: 335 SLVSSAEDDEWETVGPKNKSAVTRTQSFVPSELSKIFGGQLRSVVKARGNKASATVQPFL 394

Query: 136 CFTLVLLRELL 104
              L +L E +
Sbjct: 395 LLHLDILPEAI 405


>ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 532

 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 49/118 (41%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
 Frame = -2

Query: 487 FHPCHV*AGFENLIPGLPNSVSGRPSQEDAQEFLCFVMLKCMMKYLSVFGQVSNTGGEVS 308
           F P       +N  P +PNS+SGRP QEDAQEFL FVM +   + L + G  S+  G  S
Sbjct: 255 FRPVMFEVVLKNFTPDVPNSISGRPRQEDAQEFLSFVMDQMHDELLKLEGHSSSLNGSKS 314

Query: 307 ---LQLLFHNMETAGPKNKFVVTKAQSSVPSKISEIFGDS*EAL*RLKVARTLLRLSP 143
                +     ET GPKNK  VT+ QS +PS +S IFG    +L R K  R    + P
Sbjct: 315 SLVSSVEDDEWETVGPKNKSAVTRTQSFLPSDLSGIFGGQLRSLVRAKGNRASATVQP 372


>ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 532

 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 46/105 (43%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
 Frame = -2

Query: 490 AFHPCHV*AGFENLIPGLPNSVSGRPSQEDAQEFLCFVMLKCMMKYLSVFGQVSNTGGEV 311
           AF P       +N  P +PNS+SGRP QEDAQEFL FVM +   + L + GQ S+  G  
Sbjct: 257 AFCPVMFEDVLKNFTPDVPNSISGRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLNGSK 316

Query: 310 SL---QLLFHNMETAGPKNKFVVTKAQSSVPSKISEIFGDS*EAL 185
           S     +     ET GPKNK  VT+ QS +PS+++ IFG   ++L
Sbjct: 317 SFLVSSVEDDEWETVGPKNKSAVTRTQSFIPSELNGIFGGQLQSL 361


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