BLASTX nr result

ID: Papaver22_contig00005919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00005919
         (1802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...   220   8e-55
emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]   220   8e-55
ref|XP_002318930.1| global transcription factor group [Populus t...   215   3e-53
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...   215   4e-53
ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...   214   8e-53

>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score =  220 bits (561), Expect = 8e-55
 Identities = 152/400 (38%), Positives = 220/400 (55%), Gaps = 17/400 (4%)
 Frame = -2

Query: 1501 EISISDDKERYMEE-------LRRQHQAKLSRRLHRETAKRLGVTMPLDDLSDLITSVTA 1343
            E+S      R++ E       LRRQ  A+ S R  R T               L+T    
Sbjct: 620  EVSFRSKDPRHISEVVQGIKTLRRQVVARESERAERAT---------------LVTQEKL 664

Query: 1342 APKNNQHLQLSRNSMQLRVSIHPYTVRGHHRKLEMGTLQAHANGFRFSDYSIPLQMDVMY 1163
                N+   +    + +R    P+  RG  RKL  GTL+AH NGFR+S      ++D+MY
Sbjct: 665  QLAGNKFKPIKLFGLWIRP---PFGGRG--RKLS-GTLEAHVNGFRYSTSRPDERVDIMY 718

Query: 1162 DNIRHAFYQDGDERMAPFLHLNLHNPIMLGTETTKDIQFRL----VQTSAGSGRKGPLAR 995
             NI+HAF+Q  +  M   +H +LHN IM+GT+ TKD+QF +    V  + GSG++   A 
Sbjct: 719  GNIKHAFFQPVENEMITLIHFHLHNHIMVGTKKTKDVQFYVEVMDVVQTLGSGKRS--AY 776

Query: 994  DSDKLDKERQETVDNQMNKLDKLMHKFVWEVNSLWS-PLTSN---EFEMIERCHGFHANL 827
            D D++++E++E   ++ NK++     FV  VN LW  P  S    EF+   R  GFH  +
Sbjct: 777  DPDEIEEEQRER--DRKNKVNMDFQSFVNRVNDLWGQPQFSGLDLEFDQPLRELGFHG-V 833

Query: 826  PMKKHTSSPSFLITTLDCLVHLCETPFFVLTLQETEIVNLVRTQSDPEVFNMTFVFKDFG 647
            P K    S +F++ T  CLV L ETPF V+TL E EIVNL R     + F+MT VFKDF 
Sbjct: 834  PYK----SSAFIVPTSSCLVELIETPFLVITLAEIEIVNLERVGLGQKNFDMTIVFKDFK 889

Query: 646  LDVCHINAISSEHLLQIKQWLDARRVKYYENEQDISNWRTQIKTITDEPENFIEHGGWGF 467
             DV  I++I S  +  IK+WLD   +KYYE+  ++ NWR  +KTITD+P++FI+ GGW F
Sbjct: 890  RDVLRIDSIPSTSIDGIKEWLDTTDIKYYESRLNL-NWRQILKTITDDPQSFIDDGGWEF 948

Query: 466  LN--SGEDATEYSDSSEEGLARYNMT*EESDGEKCTTQTI 353
            LN  + +  +E+S+ S++G   Y  +  +SD E  +   I
Sbjct: 949  LNMEASDSDSEHSEESDQG---YEPSDVQSDSESSSDSDI 985


>emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]
          Length = 1083

 Score =  220 bits (561), Expect = 8e-55
 Identities = 152/400 (38%), Positives = 220/400 (55%), Gaps = 17/400 (4%)
 Frame = -2

Query: 1501 EISISDDKERYMEE-------LRRQHQAKLSRRLHRETAKRLGVTMPLDDLSDLITSVTA 1343
            E+S      R++ E       LRRQ  A+ S R  R T               L+T    
Sbjct: 620  EVSFRSKDPRHISEVVQGIKTLRRQVVARESERAERAT---------------LVTQEKL 664

Query: 1342 APKNNQHLQLSRNSMQLRVSIHPYTVRGHHRKLEMGTLQAHANGFRFSDYSIPLQMDVMY 1163
                N+   +    + +R    P+  RG  RKL  GTL+AH NGFR+S      ++D+MY
Sbjct: 665  QLAGNKFKPIKLFGLWIRP---PFGGRG--RKLS-GTLEAHVNGFRYSTSRPDERVDIMY 718

Query: 1162 DNIRHAFYQDGDERMAPFLHLNLHNPIMLGTETTKDIQFRL----VQTSAGSGRKGPLAR 995
             NI+HAF+Q  +  M   +H +LHN IM+GT+ TKD+QF +    V  + GSG++   A 
Sbjct: 719  GNIKHAFFQPVENEMITLIHFHLHNHIMVGTKKTKDVQFYVEVMDVVQTLGSGKRS--AY 776

Query: 994  DSDKLDKERQETVDNQMNKLDKLMHKFVWEVNSLWS-PLTSN---EFEMIERCHGFHANL 827
            D D++++E++E   ++ NK++     FV  VN LW  P  S    EF+   R  GFH  +
Sbjct: 777  DPDEIEEEQRER--DRKNKVNMDFQSFVNRVNDLWGQPQFSGLDLEFDQPLRELGFHG-V 833

Query: 826  PMKKHTSSPSFLITTLDCLVHLCETPFFVLTLQETEIVNLVRTQSDPEVFNMTFVFKDFG 647
            P K    S +F++ T  CLV L ETPF V+TL E EIVNL R     + F+MT VFKDF 
Sbjct: 834  PYK----SSAFIVPTSSCLVELIETPFLVITLAEIEIVNLERVGLGQKNFDMTIVFKDFK 889

Query: 646  LDVCHINAISSEHLLQIKQWLDARRVKYYENEQDISNWRTQIKTITDEPENFIEHGGWGF 467
             DV  I++I S  +  IK+WLD   +KYYE+  ++ NWR  +KTITD+P++FI+ GGW F
Sbjct: 890  RDVLRIDSIPSTSIDGIKEWLDTTDIKYYESRLNL-NWRQILKTITDDPQSFIDDGGWEF 948

Query: 466  LN--SGEDATEYSDSSEEGLARYNMT*EESDGEKCTTQTI 353
            LN  + +  +E+S+ S++G   Y  +  +SD E  +   I
Sbjct: 949  LNMEASDSDSEHSEESDQG---YEPSDVQSDSESSSDSDI 985


>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
            gi|222857306|gb|EEE94853.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1082

 Score =  215 bits (548), Expect = 3e-53
 Identities = 156/399 (39%), Positives = 221/399 (55%), Gaps = 14/399 (3%)
 Frame = -2

Query: 1528 RHSPAALWNEISISDDKERYMEELRRQHQAKLSRRLHRETAKRLGVTMPLDDLSDLITSV 1349
            +H  A    E+S      R++ E+      +L + L R    R        + ++  T V
Sbjct: 612  KHQGAIYLKEVSFRSKDPRHISEV-----VQLIKTLRRHVVARES------ERAERATLV 660

Query: 1348 TAAPKNNQHLQLSRNSMQ-LRVS---IHP-YTVRGHHRKLEMGTLQAHANGFRFSDYSIP 1184
            T      + LQL+ N  + +R++   I P +T RG  RKL  G L+AH NGFRFS     
Sbjct: 661  T-----QEKLQLAGNRFKPIRLTDLWIRPVFTGRG--RKLP-GALEAHVNGFRFSTSRSE 712

Query: 1183 LQMDVMYDNIRHAFYQDGDERMAPFLHLNLHNPIMLGTETTKDIQFRL-----VQTSAGS 1019
             ++D+M+ NI+HAF+Q  ++ M   LH +LHN IM+G + TKD+QF +     VQT  G 
Sbjct: 713  ERVDIMFSNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGG 772

Query: 1018 GRKGPLARDSDKLDKERQETVDNQMNKLDKLMHKFVWEVNSLWS-PLTSN---EFEMIER 851
             R    A D D++++E++E   ++ NK++     FV  VN LWS P  S    EF+   R
Sbjct: 773  KRS---AYDPDEIEEEQRER--DRKNKINMDFQSFVNRVNDLWSQPQFSGLDLEFDQPLR 827

Query: 850  CHGFHANLPMKKHTSSPSFLITTLDCLVHLCETPFFVLTLQETEIVNLVRTQSDPEVFNM 671
              GFH  +P K      SF++ T  CLV L ETPF V+TL E EIVNL R     + F+M
Sbjct: 828  ELGFHG-VPHKV----TSFIVPTSSCLVELVETPFLVVTLGEIEIVNLERVGLGQKNFDM 882

Query: 670  TFVFKDFGLDVCHINAISSEHLLQIKQWLDARRVKYYENEQDISNWRTQIKTITDEPENF 491
            T VFKDF  DV  I++I S  L  IK+WLD   +KYYE+  ++ NWR  +KTITD+P++F
Sbjct: 883  TIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNL-NWRQILKTITDDPQSF 941

Query: 490  IEHGGWGFLNSGEDATEYSDSSEEGLARYNMT*EESDGE 374
            I+ GGW FLN  E +   SD+SE+    Y  +  E + E
Sbjct: 942  IDDGGWEFLNL-EASDSDSDNSEDSDQGYIPSDAEPESE 979


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
            gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
            [Medicago truncatula]
          Length = 1066

 Score =  215 bits (547), Expect = 4e-53
 Identities = 156/412 (37%), Positives = 213/412 (51%), Gaps = 15/412 (3%)
 Frame = -2

Query: 1564 FESFSKRLKYQNRHSPAALWNEISISDDKERYMEE-------LRRQHQAKLSRRLHRETA 1406
            F S    +K+Q     +    E S      R++ E       LRRQ  A+ S R  R T 
Sbjct: 606  FSSLDTNMKFQG----SIYLKEASFRSKDSRHISEVVQSIKTLRRQVVARESERAERAT- 660

Query: 1405 KRLGVTMPLDDLSDLITSVTAAPKNNQHLQLSRNSMQLRVSIHPYTVRGHHRKLEMGTLQ 1226
                          L+T       NN+   +    + +R    P+  RG  RK+  GTL+
Sbjct: 661  --------------LVTQEKLQLANNRFKPIRLPDLWIRP---PFGGRG--RKIP-GTLE 700

Query: 1225 AHANGFRFSDYSIPLQMDVMYDNIRHAFYQDGDERMAPFLHLNLHNPIMLGTETTKDIQF 1046
            AH NGFR+S      ++DVM+ NI+HAF+Q  +  M   LH +LHN IM+G + TKD+QF
Sbjct: 701  AHVNGFRYSTTRSDERVDVMFANIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQF 760

Query: 1045 RL----VQTSAGSGRKGPLARDSDKLDKERQETVDNQMNKLDKLMHKFVWEVNSLWSPLT 878
             +    +  + G G++   A D D+L++E++E    + NK++     FV  VN LW    
Sbjct: 761  YVEVMDMVQNVGGGKRS--AYDPDELEEEQRER--ERKNKINVEFQSFVNRVNDLWGQPQ 816

Query: 877  SN----EFEMIERCHGFHANLPMKKHTSSPSFLITTLDCLVHLCETPFFVLTLQETEIVN 710
             N    EF+   R  GF    P   H SS  F++ T  CLV L ETPF V+TL E EIVN
Sbjct: 817  FNGLDLEFDQPLRELGF----PGVPHKSSV-FIVPTSACLVELIETPFLVVTLSEIEIVN 871

Query: 709  LVRTQSDPEVFNMTFVFKDFGLDVCHINAISSEHLLQIKQWLDARRVKYYENEQDISNWR 530
            L R     + F+MT VFKDF  DV  I++I S  L  IK+WLD   +KYYE+  ++ NWR
Sbjct: 872  LERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNL-NWR 930

Query: 529  TQIKTITDEPENFIEHGGWGFLNSGEDATEYSDSSEEGLARYNMT*EESDGE 374
              +KTITD+P++FIE GGW FLN      E +DS  EG    +   E SD E
Sbjct: 931  QILKTITDDPQSFIEGGGWEFLN-----LEATDSESEGSEESDKGYEPSDVE 977


>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
            gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
            subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score =  214 bits (544), Expect = 8e-53
 Identities = 153/410 (37%), Positives = 217/410 (52%), Gaps = 17/410 (4%)
 Frame = -2

Query: 1552 SKRLKYQNRHSPAALWNEISISDDKERYMEE-------LRRQHQAKLSRRLHRETAKRLG 1394
            S  LK+Q     +    E S      R++ E       LRRQ  A+ S R  R T     
Sbjct: 611  SNSLKFQG----SIYLKEASFRSKDSRHISEVVQSIKTLRRQVVARESERAERAT----- 661

Query: 1393 VTMPLDDLSDLITSVTAAPKNNQHLQLSRNSMQLRVSIHPYTVRGHHRKLEMGTLQAHAN 1214
                      L+T       NN+   +  + + +R +       G  RK+  GTL+AH N
Sbjct: 662  ----------LVTQEKLQLANNRFKPIRLSDLWIRPAFG-----GRGRKIP-GTLEAHVN 705

Query: 1213 GFRFSDYSIPLQMDVMYDNIRHAFYQDGDERMAPFLHLNLHNPIMLGTETTKDIQFRL-- 1040
            GFR+S      ++D+M+ NI+HAF+Q  +  M   LH +LHN IM+G + TKD+QF +  
Sbjct: 706  GFRYSTTRQDERVDIMFPNIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEV 765

Query: 1039 --VQTSAGSGRKGPLARDSDKLDKERQETVDNQMNKLDKLMHKFVWEVNSLWSPLTSN-- 872
              +  + GSG++   A D D+L++E++E    + NK++     FV  VN LW     N  
Sbjct: 766  MDMVQNVGSGKRS--AYDPDELEEEQRER--QRKNKINVEFQTFVNRVNDLWGQPQFNGL 821

Query: 871  --EFEMIERCHGFHANLPMKKHTSSPSFLITTLDCLVHLCETPFFVLTLQETEIVNLVRT 698
              EF+   R  GF    P   H SS  F++ T  CLV L ETPF V+TL E EIVNL R 
Sbjct: 822  DLEFDQPLRELGF----PGVPHKSSV-FIVPTSACLVELIETPFLVVTLSEIEIVNLERV 876

Query: 697  QSDPEVFNMTFVFKDFGLDVCHINAISSEHLLQIKQWLDARRVKYYENEQDISNWRTQIK 518
                + F+MT VFKDF  DV  I++I S  L  IK+WLD   +KYYE+  ++ NWR  +K
Sbjct: 877  GLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNL-NWRQILK 935

Query: 517  TITDEPENFIEHGGWGFLN--SGEDATEYSDSSEEGLARYNMT*EESDGE 374
            TITD+P++FIE GGW FLN  + +  +E S+ S++G    ++   ESD E
Sbjct: 936  TITDDPQSFIEGGGWEFLNLEATDSESENSEESDKGYEPSDVE-PESDSE 984


Top